[CHNOSZ-commits] r620 - in pkg/CHNOSZ: . man

[noreply at r-forge.r-project.org]

Author: jedick
Date: 2020-11-10 08:40:30 +0100 (Tue, 10 Nov 2020)
New Revision: 620

Modified:
   pkg/CHNOSZ/DESCRIPTION
   pkg/CHNOSZ/man/util.fasta.Rd
Log:
Fix protein name for uniprot.aa() example in util.fasta.Rd


Modified: pkg/CHNOSZ/DESCRIPTION
===================================================================
--- pkg/CHNOSZ/DESCRIPTION	2020-11-10 07:30:32 UTC (rev 619)
+++ pkg/CHNOSZ/DESCRIPTION	2020-11-10 07:40:30 UTC (rev 620)
@@ -1,6 +1,6 @@
 Date: 2020-11-10
 Package: CHNOSZ
-Version: 1.3.6-93
+Version: 1.3.6-94
 Title: Thermodynamic Calculations and Diagrams for Geochemistry
 Authors at R: c(
     person("Jeffrey", "Dick", , "j3ffdick at gmail.com", role = c("aut", "cre"),

Modified: pkg/CHNOSZ/man/util.fasta.Rd
===================================================================
--- pkg/CHNOSZ/man/util.fasta.Rd	2020-11-10 07:30:32 UTC (rev 619)
+++ pkg/CHNOSZ/man/util.fasta.Rd	2020-11-10 07:40:30 UTC (rev 620)
@@ -77,6 +77,8 @@
 # download amino acid composition of a protein
 # start at position 2 to remove the initiator methionine
 aa <- uniprot.aa("ALAT1_HUMAN", start=2)
+# change the name from "sp|P24298" to "ALAT1" 20201110
+aa$protein <- "ALAT1"
 # add it to thermo()$protein
 ip <- add.protein(aa)
 # now it's possible to calculate some properties