[CHNOSZ-commits] r453 - in pkg/CHNOSZ: . vignettes

noreply at r-forge.r-project.org noreply at r-forge.r-project.org
Tue Apr 23 07:21:08 CEST 2019


Author: jedick
Date: 2019-04-23 07:21:07 +0200 (Tue, 23 Apr 2019)
New Revision: 453

Modified:
   pkg/CHNOSZ/DESCRIPTION
   pkg/CHNOSZ/vignettes/mklinks.sh
   pkg/CHNOSZ/vignettes/obigt.bib
Log:
obigt.bib: use Unicode degree symbol instead of LaTeX \circ


Modified: pkg/CHNOSZ/DESCRIPTION
===================================================================
--- pkg/CHNOSZ/DESCRIPTION	2019-04-20 09:57:37 UTC (rev 452)
+++ pkg/CHNOSZ/DESCRIPTION	2019-04-23 05:21:07 UTC (rev 453)
@@ -1,6 +1,6 @@
-Date: 2019-04-20
+Date: 2019-04-23
 Package: CHNOSZ
-Version: 1.3.2
+Version: 1.3.2-1
 Title: Thermodynamic Calculations and Diagrams for Geochemistry
 Authors at R: c(
     person("Jeffrey", "Dick", , "j3ffdick at gmail.com", role = c("aut", "cre"),

Modified: pkg/CHNOSZ/vignettes/mklinks.sh
===================================================================
--- pkg/CHNOSZ/vignettes/mklinks.sh	2019-04-20 09:57:37 UTC (rev 452)
+++ pkg/CHNOSZ/vignettes/mklinks.sh	2019-04-23 05:21:07 UTC (rev 453)
@@ -37,7 +37,7 @@
 sed -i '120,$s/<code>diagram()<\/code>/<code><a href="..\/html\/diagram.html" style="background-image:none;">diagram()<\/a><\/code>/g' anintro.html
 sed -i '120,$s/<code>basis()<\/code>/<code><a href="..\/html\/basis.html" style="background-image:none;">basis()<\/a><\/code>/g' anintro.html
 sed -i '120,$s/<code>species()<\/code>/<code><a href="..\/html\/species.html" style="background-image:none;">species()<\/a><\/code>/g' anintro.html
-sed -i '120,$s/<code>reset()<\/code>/<code><a href="..\/html\/reset.html" style="background-image:none;">reset()<\/a><\/code>/g' anintro.html
+sed -i '120,$s/<code>reset()<\/code>/<code><a href="..\/html\/thermo.html" style="background-image:none;">reset()<\/a><\/code>/g' anintro.html
 sed -i '120,$s/<code>describe.reaction()<\/code>/<code><a href="..\/html\/util.expression.html" style="background-image:none;">describe.reaction()<\/a><\/code>/g' anintro.html
 sed -i '120,$s/<code>swap.basis()<\/code>/<code><a href="..\/html\/swap.basis.html" style="background-image:none;">swap.basis()<\/a><\/code>/g' anintro.html
 sed -i '120,$s/<code>water.lines()<\/code>/<code><a href="..\/html\/util.plot.html" style="background-image:none;">water.lines()<\/a><\/code>/g' anintro.html
@@ -99,5 +99,5 @@
 
 # add links to obigt.Rmd
 sed -i '120,$s/<code>add.obigt()<\/code>/<code><a href="..\/html\/add.obigt.html" style="color:red;">add.obigt()<\/a><\/code>/g' obigt.html
-sed -i '120,$s/<code>reset()<\/code>/<code><a href="..\/html\/reset.html" style="color:red;">reset()<\/a><\/code>/g' obigt.html
+sed -i '120,$s/<code>reset()<\/code>/<code><a href="..\/html\/thermo.html" style="color:red;">reset()<\/a><\/code>/g' obigt.html
 sed -i 's/<code>?add.obigt<\/code>/<code><a href="..\/html\/add.obigt.html" style="color:red;">?add.obigt<\/a><\/code>/g' obigt.html

Modified: pkg/CHNOSZ/vignettes/obigt.bib
===================================================================
--- pkg/CHNOSZ/vignettes/obigt.bib	2019-04-20 09:57:37 UTC (rev 452)
+++ pkg/CHNOSZ/vignettes/obigt.bib	2019-04-23 05:21:07 UTC (rev 453)
@@ -16,7 +16,7 @@
 @Article{AVZP06,
   author    = {Akinfiev, N. N. and Voronin, M. V. and Zotov, A. V. and Prokof'ev, V. {\relax Yu}.},
   journal   = {Geochemistry International},
-  title     = {{E}xperimental investigation of the stability of a chloroborate complex and thermodynamic description of aqueous species in the {B}-{N}a-{C}l-{O}-{H} system up to 350$^\circ${C}},
+  title     = {{E}xperimental investigation of the stability of a chloroborate complex and thermodynamic description of aqueous species in the {B}-{N}a-{C}l-{O}-{H} system up to 350°{C}},
   year      = {2006},
   volume    = {44},
   number    = {9},
@@ -27,7 +27,7 @@
 @Article{AZ01,
   author    = {Akinfiev, N. N. and Zotov, A. V.},
   journal   = {Geochemistry International},
-  title     = {{T}hermodynamic description of chloride, hydrosulfide, and hydroxo complexes of {A}g({I}), {C}u({I}), and {A}u({I}) at temperatures of 25-500$^\circ${C} and pressures of 1-2000 bar},
+  title     = {{T}hermodynamic description of chloride, hydrosulfide, and hydroxo complexes of {A}g({I}), {C}u({I}), and {A}u({I}) at temperatures of 25-500°{C} and pressures of 1-2000 bar},
   year      = {2001},
   volume    = {39},
   number    = {10},
@@ -36,14 +36,14 @@
 }
 
 @Article{AH97b,
-  author    = {Amend, Jan P. and Helgeson, Harold C.},
-  journal   = {Journal of the Chemical Society, Faraday Transactions},
-  title     = {{C}alculation of the standard molal thermodynamic properties of aqueous biomolecules at elevated temperatures and pressures. {P}art 1. \textsc{l}-{$\alpha$}-amino acids},
-  year      = {1997},
-  volume    = {93},
-  number    = {10},
-  pages     = {1927--1941},
-  doi       = {10.1039/A608126F},
+  author        = {Amend, Jan P. and Helgeson, Harold C.},
+  journal       = {Journal of the Chemical Society, Faraday Transactions},
+  title         = {{C}alculation of the standard molal thermodynamic properties of aqueous biomolecules at elevated temperatures and pressures. {P}art 1. \textsc{l}-{$\alpha$}-amino acids},
+  year          = {1997},
+  volume        = {93},
+  number        = {10},
+  pages         = {1927--1941},
+  doi           = {10.1039/A608126F},
 }
 
 @Article{AP01,
@@ -91,13 +91,13 @@
 }
 
 @Article{CS16,
-  author    = {Canovas, III, Peter A. and Shock, Everett L.},
-  journal   = {Geochimica et Cosmochimica Acta},
-  title     = {{G}eobiochemistry of metabolism: {S}tandard state thermodynamic properties of the citric acid cycle},
-  year      = {2016},
-  volume    = {195},
-  pages     = {293--322},
-  doi       = {10.1016/j.gca.2016.08.028},
+  author        = {Canovas, III, Peter A. and Shock, Everett L.},
+  journal       = {Geochimica et Cosmochimica Acta},
+  title         = {{G}eobiochemistry of metabolism: {S}tandard state thermodynamic properties of the citric acid cycle},
+  year          = {2016},
+  volume        = {195},
+  pages         = {293--322},
+  doi           = {10.1016/j.gca.2016.08.028},
 }
 
 @Article{DSM+97,
@@ -131,25 +131,25 @@
 }
 
 @Article{DEH+13,
-  author    = {Dick, Jeffrey M. and Evans, Katy A. and Holman, Alex I. and Jaraula, Caroline M. B. and Grice, Kliti},
-  journal   = {Geochimica et Cosmochimica Acta},
-  title     = {{E}stimation and application of the thermodynamic properties of aqueous phenanthrene and isomers of methylphenanthrene at high temperature},
-  year      = {2013},
-  volume    = {122},
-  pages     = {247--266},
-  booktitle = {34th International Geological Congress},
-  doi       = {10.1016/j.gca.2013.08.020},
+  author        = {Dick, Jeffrey M. and Evans, Katy A. and Holman, Alex I. and Jaraula, Caroline M. B. and Grice, Kliti},
+  journal       = {Geochimica et Cosmochimica Acta},
+  title         = {{E}stimation and application of the thermodynamic properties of aqueous phenanthrene and isomers of methylphenanthrene at high temperature},
+  year          = {2013},
+  volume        = {122},
+  pages         = {247--266},
+  booktitle     = {34th International Geological Congress},
+  doi           = {10.1016/j.gca.2013.08.020},
 }
 
 @Article{DLH06,
-  author    = {Dick, Jeffrey M. and LaRowe, Douglas E. and Helgeson, Harold C.},
-  journal   = {Biogeosciences},
-  title     = {{T}emperature, pressure, and electrochemical constraints on protein speciation: {G}roup additivity calculation of the standard molal thermodynamic properties of ionized unfolded proteins},
-  year      = {2006},
-  volume    = {3},
-  number    = {3},
-  pages     = {311--336},
-  doi       = {10.5194/bg-3-311-2006},
+  author        = {Dick, Jeffrey M. and LaRowe, Douglas E. and Helgeson, Harold C.},
+  journal       = {Biogeosciences},
+  title         = {{T}emperature, pressure, and electrochemical constraints on protein speciation: {G}roup additivity calculation of the standard molal thermodynamic properties of ionized unfolded proteins},
+  year          = {2006},
+  volume        = {3},
+  number        = {3},
+  pages         = {311--336},
+  doi           = {10.5194/bg-3-311-2006},
 }
 
 @Article{GKL02,
@@ -164,13 +164,13 @@
 }
 
 @Book{HGK84,
-  author    = {Haar, Lester and Gallagher, John S. and Kell, George S.},
-  publisher = {Hemisphere Publishing Corporation},
-  title     = {{NBS}/{NRC} {S}team {T}ables: {T}hermodynamic and {T}ransport {P}roperties and {C}omputer {P}rograms for {V}apor and {L}iquid {S}tates of {W}ater in {SI} {U}nits},
-  year      = {1984},
-  address   = {Washington, D. C.},
-  pages     = {320},
-  url       = {http://www.worldcat.org/oclc/858456124},
+  author        = {Haar, Lester and Gallagher, John S. and Kell, George S.},
+  publisher     = {Hemisphere Publishing Corporation},
+  title         = {{NBS}/{NRC} {S}team {T}ables: {T}hermodynamic and {T}ransport {P}roperties and {C}omputer {P}rograms for {V}apor and {L}iquid {S}tates of {W}ater in {SI} {U}nits},
+  year          = {1984},
+  address       = {Washington, D. C.},
+  pages         = {320},
+  url           = {http://www.worldcat.org/oclc/858456124},
 }
 
 @Article{HSS95,
@@ -230,14 +230,14 @@
 }
 
 @Article{HRMNS09,
-  author    = {Helgeson, Harold C. and Richard, Laurent and McKenzie, William F. and Norton, Denis L. and Schmitt, Alexandra},
-  journal   = {Geochimica et Cosmochimica Acta},
-  title     = {{A} chemical and thermodynamic model of oil generation in hydrocarbon source rocks},
-  year      = {2009},
-  volume    = {73},
-  number    = {3},
-  pages     = {594--695},
-  doi       = {10.1016/j.gca.2008.03.004},
+  author        = {Helgeson, Harold C. and Richard, Laurent and McKenzie, William F. and Norton, Denis L. and Schmitt, Alexandra},
+  journal       = {Geochimica et Cosmochimica Acta},
+  title         = {{A} chemical and thermodynamic model of oil generation in hydrocarbon source rocks},
+  year          = {2009},
+  volume        = {73},
+  number        = {3},
+  pages         = {594--695},
+  doi           = {10.1016/j.gca.2008.03.004},
 }
 
 @Article{JH85,
@@ -252,14 +252,14 @@
 }
 
 @Article{JOH92,
-  author        = {Johnson, James W. and Oelkers, Eric H. and Helgeson, Harold C.},
-  journal       = {Computers \& Geosciences},
-  title         = {{SUPCRT}92: {A} software package for calculating the standard molal thermodynamic properties of minerals, gases, aqueous species, and reactions from 1 to 5000 bar and 0 to 1000°{C}},
-  year          = {1992},
-  volume        = {18},
-  number        = {7},
-  pages         = {899--947},
-  doi           = {10.1016/0098-3004(92)90029-Q},
+  author    = {Johnson, James W. and Oelkers, Eric H. and Helgeson, Harold C.},
+  journal   = {Computers \& Geosciences},
+  title     = {{SUPCRT}92: {A} software package for calculating the standard molal thermodynamic properties of minerals, gases, aqueous species, and reactions from 1 to 5000 bar and 0 to 1000°{C}},
+  year      = {1992},
+  volume    = {18},
+  number    = {7},
+  pages     = {899--947},
+  doi       = {10.1016/0098-3004(92)90029-Q},
 }
 
 @Book{Kel60,
@@ -273,47 +273,47 @@
 }
 
 @Article{Kit14,
-  author    = {Kitadai, Norio},
-  journal   = {Journal of Molecular Evolution},
-  title     = {{T}hermodynamic prediction of glycine polymerization as a function of temperature and p{H} consistent with experimentally obtained results},
-  year      = {2014},
-  volume    = {78},
-  number    = {3-4},
-  pages     = {171--187},
-  doi       = {10.1007/s00239-014-9616-1},
-  issn      = {0022-2844},
+  author        = {Kitadai, Norio},
+  journal       = {Journal of Molecular Evolution},
+  title         = {{T}hermodynamic prediction of glycine polymerization as a function of temperature and p{H} consistent with experimentally obtained results},
+  year          = {2014},
+  volume        = {78},
+  number        = {3-4},
+  pages         = {171--187},
+  doi           = {10.1007/s00239-014-9616-1},
+  issn          = {0022-2844},
 }
 
 @Article{LD12,
-  author    = {LaRowe, Douglas E. and Dick, Jeffrey M.},
-  journal   = {Geochimica et Cosmochimica Acta},
-  title     = {{C}alculation of the standard molal thermodynamic properties of crystalline peptides},
-  year      = {2012},
-  volume    = {80},
-  pages     = {70--91},
-  doi       = {10.1016/j.gca.2011.11.041},
+  author        = {LaRowe, Douglas E. and Dick, Jeffrey M.},
+  journal       = {Geochimica et Cosmochimica Acta},
+  title         = {{C}alculation of the standard molal thermodynamic properties of crystalline peptides},
+  year          = {2012},
+  volume        = {80},
+  pages         = {70--91},
+  doi           = {10.1016/j.gca.2011.11.041},
 }
 
 @Article{LH06a,
-  author    = {LaRowe, Douglas E. and Helgeson, Harold C.},
-  journal   = {Geochimica et Cosmochimica Acta},
-  title     = {{B}iomolecules in hydrothermal systems: {C}alculation of the standard molal thermodynamic properties of nucleic-acid bases, nucleosides, and nucleotides at elevated temperatures and pressures},
-  year      = {2006},
-  volume    = {70},
-  number    = {18},
-  pages     = {4680--4724},
-  doi       = {10.1016/j.gca.2006.04.010},
+  author        = {LaRowe, Douglas E. and Helgeson, Harold C.},
+  journal       = {Geochimica et Cosmochimica Acta},
+  title         = {{B}iomolecules in hydrothermal systems: {C}alculation of the standard molal thermodynamic properties of nucleic-acid bases, nucleosides, and nucleotides at elevated temperatures and pressures},
+  year          = {2006},
+  volume        = {70},
+  number        = {18},
+  pages         = {4680--4724},
+  doi           = {10.1016/j.gca.2006.04.010},
 }
 
 @Article{LH06b,
-  author    = {LaRowe, Douglas E. and Helgeson, Harold C.},
-  journal   = {Thermochimica Acta},
-  title     = {{T}he energetics of metabolism in hydrothermal systems: {C}alculation of the standard molal thermodynamic properties of magnesium-complexed adenosine nucleotides and {NAD} and {NADP} at elevated temperatures and pressures},
-  year      = {2006},
-  volume    = {448},
-  number    = {2},
-  pages     = {82--106},
-  doi       = {10.1016/j.tca.2006.06.008},
+  author        = {LaRowe, Douglas E. and Helgeson, Harold C.},
+  journal       = {Thermochimica Acta},
+  title         = {{T}he energetics of metabolism in hydrothermal systems: {C}alculation of the standard molal thermodynamic properties of magnesium-complexed adenosine nucleotides and {NAD} and {NADP} at elevated temperatures and pressures},
+  year          = {2006},
+  volume        = {448},
+  number        = {2},
+  pages         = {82--106},
+  doi           = {10.1016/j.tca.2006.06.008},
 }
 
 @Article{MGN03,
@@ -330,16 +330,16 @@
 }
 
 @Article{MLS+03,
-  author    = {Majzlan, Juraj and Lang, Brian E. and Stevens, Rebecca and Navrotsky, Alexandra and Woodfield, Brian F. and Boerio-Goates, Juliana},
-  journal   = {American Mineralogist},
-  title     = {{T}hermodynamics of {F}e oxides: {P}art {I}. {E}ntropy at standard temperature and pressure and heat capacity of goethite ($\alpha$-{F}e{OOH}), lepidocrocite ($\gamma$-{F}e{OOH}), and maghemite ($\gamma$-{F}e$_2${O}$_3$)},
-  year      = {2003},
-  volume    = {88},
-  number    = {5-6},
-  pages     = {846--854},
-  day       = {JUN},
-  doi       = {10.2138/am-2003-5-613},
-  issn      = {0003-004X},
+  author        = {Majzlan, Juraj and Lang, Brian E. and Stevens, Rebecca and Navrotsky, Alexandra and Woodfield, Brian F. and Boerio-Goates, Juliana},
+  journal       = {American Mineralogist},
+  title         = {{T}hermodynamics of {F}e oxides: {P}art {I}. {E}ntropy at standard temperature and pressure and heat capacity of goethite ($\alpha$-{F}e{OOH}), lepidocrocite ($\gamma$-{F}e{OOH}), and maghemite ($\gamma$-{F}e$_2${O}$_3$)},
+  year          = {2003},
+  volume        = {88},
+  number        = {5-6},
+  pages         = {846--854},
+  day           = {JUN},
+  doi           = {10.2138/am-2003-5-613},
+  issn          = {0003-004X},
 }
 
 @Article{MNM+06,
@@ -535,20 +535,20 @@
 }
 
 @Article{RH98,
-  author    = {Richard, Laurent and Helgeson, Harold C.},
-  journal   = {Geochimica et Cosmochimica Acta},
-  title     = {{C}alculation of the thermodynamic properties at elevated temperatures and pressures of saturated and aromatic high molecular weight solid and liquid hydrocarbons in kerogen, bitumen, petroleum, and other organic matter of biogeochemical interest},
-  year      = {1998},
-  volume    = {62},
-  number    = {23-24},
-  pages     = {3591--3636},
-  doi       = {10.1016/S0016-7037(97)00345-1},
+  author        = {Richard, Laurent and Helgeson, Harold C.},
+  journal       = {Geochimica et Cosmochimica Acta},
+  title         = {{C}alculation of the thermodynamic properties at elevated temperatures and pressures of saturated and aromatic high molecular weight solid and liquid hydrocarbons in kerogen, bitumen, petroleum, and other organic matter of biogeochemical interest},
+  year          = {1998},
+  volume        = {62},
+  number        = {23-24},
+  pages         = {3591--3636},
+  doi           = {10.1016/S0016-7037(97)00345-1},
 }
 
 @Book{RH95,
   author    = {Robie, Richard A. and Hemingway, Bruce S.},
   publisher = {U. S. Geological Survey},
-  title     = {{T}hermodynamic {P}roperties of {M}inerals and {R}elated {S}ubstances at 298.15 {K} and 1 {B}ar ($10^5$ {P}ascals) {P}ressure and at {H}igher {T}emperatures},
+  title     = {{T}hermodynamic {P}roperties of {M}inerals and {R}elated {S}ubstances at 298.15 {K} and 1 {B}ar (10\textsuperscript{5} {P}ascals) {P}ressure and at {H}igher {T}emperatures},
   year      = {1995},
   series    = {Bulletin 2131},
   address   = {Washington, D. C.},
@@ -645,15 +645,15 @@
 }
 
 @Article{Sho95,
-  author     = {Shock, Everett L.},
-  journal    = {American Journal of Science},
-  title      = {{O}rganic acids in hydrothermal solutions: {S}tandard molal thermodynamic properties of carboxylic acids and estimates of dissociation constants at high temperatures and pressures},
-  year       = {1995},
-  volume     = {295},
-  number     = {5},
-  pages      = {496--580},
-  doi        = {10.2475/ajs.295.5.496},
-  size       = {85 p.},
+  author        = {Shock, Everett L.},
+  journal       = {American Journal of Science},
+  title         = {{O}rganic acids in hydrothermal solutions: {S}tandard molal thermodynamic properties of carboxylic acids and estimates of dissociation constants at high temperatures and pressures},
+  year          = {1995},
+  volume        = {295},
+  number        = {5},
+  pages         = {496--580},
+  doi           = {10.2475/ajs.295.5.496},
+  size          = {85 p.},
 }
 
 @Article{Sho09,
@@ -677,14 +677,14 @@
 }
 
 @Article{SH88,
-  author        = {Shock, Everett L. and Helgeson, Harold C.},
-  journal       = {Geochimica et Cosmochimica Acta},
-  title         = {{C}alculation of the thermodynamic and transport properties of aqueous species at high pressures and temperatures: {C}orrelation algorithms for ionic species and equation of state predictions to 5 kb and 1000$^\circ${C}},
-  year          = {1988},
-  volume        = {52},
-  number        = {8},
-  pages         = {2009--2036},
-  doi           = {10.1016/0016-7037(88)90181-0},
+  author    = {Shock, Everett L. and Helgeson, Harold C.},
+  journal   = {Geochimica et Cosmochimica Acta},
+  title     = {{C}alculation of the thermodynamic and transport properties of aqueous species at high pressures and temperatures: {C}orrelation algorithms for ionic species and equation of state predictions to 5 kb and 1000°{C}},
+  year      = {1988},
+  volume    = {52},
+  number    = {8},
+  pages     = {2009--2036},
+  doi       = {10.1016/0016-7037(88)90181-0},
 }
 
 @Article{SH90,
@@ -721,14 +721,14 @@
 }
 
 @Article{SK95,
-  author    = {Shock, Everett L. and Koretsky, Carla M.},
-  journal   = {Geochimica et Cosmochimica Acta},
-  title     = {{M}etal-organic complexes in geochemical processes: {E}stimation of standard partial molal thermodynamic properties of aqueous complexes between metal cations and monovalent organic acid ligands at high pressures and temperatures},
-  year      = {1995},
-  volume    = {59},
-  number    = {8},
-  pages     = {1497--1532},
-  doi       = {10.1016/0016-7037(95)00058-8},
+  author        = {Shock, Everett L. and Koretsky, Carla M.},
+  journal       = {Geochimica et Cosmochimica Acta},
+  title         = {{M}etal-organic complexes in geochemical processes: {E}stimation of standard partial molal thermodynamic properties of aqueous complexes between metal cations and monovalent organic acid ligands at high pressures and temperatures},
+  year          = {1995},
+  volume        = {59},
+  number        = {8},
+  pages         = {1497--1532},
+  doi           = {10.1016/0016-7037(95)00058-8},
 }
 
 @Article{SM93,
@@ -754,14 +754,14 @@
 }
 
 @Article{SSWS97,
-  author    = {Shock, Everett L. and Sassani, David C. and Willis, Marc and Sverjensky, Dimitri A.},
-  journal   = {Geochimica et Cosmochimica Acta},
-  title     = {{I}norganic species in geologic fluids: {C}orrelations among standard molal thermodynamic properties of aqueous ions and hydroxide complexes},
-  year      = {1997},
-  volume    = {61},
-  number    = {5},
-  pages     = {907--950},
-  doi       = {10.1016/S0016-7037(96)00339-0},
+  author        = {Shock, Everett L. and Sassani, David C. and Willis, Marc and Sverjensky, Dimitri A.},
+  journal       = {Geochimica et Cosmochimica Acta},
+  title         = {{I}norganic species in geologic fluids: {C}orrelations among standard molal thermodynamic properties of aqueous ions and hydroxide complexes},
+  year          = {1997},
+  volume        = {61},
+  number        = {5},
+  pages         = {907--950},
+  doi           = {10.1016/S0016-7037(96)00339-0},
 }
 
 @Article{Ste01,
@@ -788,25 +788,25 @@
 }
 
 @Article{SHA14,
-  author        = {Sverjensky, Dimitri A. and Harrison, Brandon and Azzolini, David},
-  journal       = {Geochimica et Cosmochimica Acta},
-  title         = {{W}ater in the deep {E}arth: {T}he dielectric constant and the solubilities of quartz and corundum to 60 kb and 1,200 $^\circ${C}},
-  year          = {2014},
-  volume        = {129},
-  pages         = {125--145},
-  doi           = {10.1016/j.gca.2013.12.019},
-  issn          = {0016-7037},
+  author    = {Sverjensky, Dimitri A. and Harrison, Brandon and Azzolini, David},
+  journal   = {Geochimica et Cosmochimica Acta},
+  title     = {{W}ater in the deep {E}arth: {T}he dielectric constant and the solubilities of quartz and corundum to 60 kb and 1,200 °{C}},
+  year      = {2014},
+  volume    = {129},
+  pages     = {125--145},
+  doi       = {10.1016/j.gca.2013.12.019},
+  issn      = {0016-7037},
 }
 
 @Article{SSH97,
-  author        = {Sverjensky, D. A. and Shock, E. L. and Helgeson, H. C.},
-  journal       = {Geochimica et Cosmochimica Acta},
-  title         = {{P}rediction of the thermodynamic properties of aqueous metal complexes to 1000$^\circ${C} and 5 kb},
-  year          = {1997},
-  volume        = {61},
-  number        = {7},
-  pages         = {1359--1412},
-  doi           = {10.1016/S0016-7037(97)00009-4},
+  author    = {Sverjensky, D. A. and Shock, E. L. and Helgeson, H. C.},
+  journal   = {Geochimica et Cosmochimica Acta},
+  title     = {{P}rediction of the thermodynamic properties of aqueous metal complexes to 1000°{C} and 5 kb},
+  year      = {1997},
+  volume    = {61},
+  number    = {7},
+  pages     = {1359--1412},
+  doi       = {10.1016/S0016-7037(97)00009-4},
 }
 
 @Article{TS01,
@@ -823,7 +823,7 @@
 @Article{TZA97,
   author    = {Tagirov, B. R. and Zotov, A. V. and Akinfiev, N. N.},
   journal   = {Geochimica et Cosmochimica Acta},
-  title     = {{E}xperimental study of dissociation of {HC}l from 350 to 500$^\circ${C} and from 500 to 2500 bars: {T}hermodynamic properties of {HC}l$_\mathrm{(aq)}^\circ$},
+  title     = {{E}xperimental study of dissociation of {HC}l from 350 to 500°{C} and from 500 to 2500 bars: {T}hermodynamic properties of {HC}l°\textsubscript{(aq)}},
   year      = {1997},
   volume    = {61},
   number    = {20},
@@ -865,14 +865,14 @@
 }
 
 @Article{WP02,
-  author    = {Wagner, W. and Pru{\ss}, A.},
-  journal   = {Journal of Physical and Chemical Reference Data},
-  title     = {{T}he {IAPWS} formulation 1995 for the thermodynamic properties of ordinary water substance for general and scientific use},
-  year      = {2002},
-  volume    = {31},
-  number    = {2},
-  pages     = {387--535},
-  doi       = {10.1063/1.1461829},
+  author        = {Wagner, W. and Pru{\ss}, A.},
+  journal       = {Journal of Physical and Chemical Reference Data},
+  title         = {{T}he {IAPWS} formulation 1995 for the thermodynamic properties of ordinary water substance for general and scientific use},
+  year          = {2002},
+  volume        = {31},
+  number        = {2},
+  pages         = {387--535},
+  doi           = {10.1063/1.1461829},
 }
 
 @Article{ZZL+16,
@@ -1000,14 +1000,14 @@
 }
 
 @Article{LCT17,
-  author    = {Alexander R. Lowe and Jenny S. Cox and Peter R. Tremaine},
-  journal   = {Journal of Chemical Thermodynamics},
-  title     = {{T}hermodynamics of aqueous adenine: {S}tandard partial molar volumes and heat capacities of adenine, adeninium chloride, and sodium adeninate from ${T}$ = 278.15 {K} to 393.15 {K}},
-  year      = {2017},
-  volume    = {112},
-  pages     = {129--145},
-  doi       = {10.1016/j.jct.2017.04.005},
-  issn      = {0021-9614},
+  author        = {Alexander R. Lowe and Jenny S. Cox and Peter R. Tremaine},
+  journal       = {Journal of Chemical Thermodynamics},
+  title         = {{T}hermodynamics of aqueous adenine: {S}tandard partial molar volumes and heat capacities of adenine, adeninium chloride, and sodium adeninate from ${T}$ = 278.15 {K} to 393.15 {K}},
+  year          = {2017},
+  volume        = {112},
+  pages         = {129--145},
+  doi           = {10.1016/j.jct.2017.04.005},
+  issn          = {0021-9614},
 }
 
 @Misc{DEW17,
@@ -1032,15 +1032,15 @@
 }
 
 @Article{FDM+14,
-  author    = {Facq, Sébastien and Daniel, Isabelle and Montagnac, Gilles and Cardon, Hervé and Sverjensky, Dimitri A.},
-  journal   = {Geochimica et Cosmochimica Acta},
-  title     = {\emph{In situ} {R}aman study and thermodynamic model of aqueous carbonate speciation in equilibrium with aragonite under subduction zone conditions},
-  year      = {2014},
-  volume    = {132},
-  number    = {Supplement C},
-  pages     = {375--390},
-  doi       = {10.1016/j.gca.2014.01.030},
-  issn      = {0016-7037},
+  author        = {Facq, Sébastien and Daniel, Isabelle and Montagnac, Gilles and Cardon, Hervé and Sverjensky, Dimitri A.},
+  journal       = {Geochimica et Cosmochimica Acta},
+  title         = {\emph{In situ} {R}aman study and thermodynamic model of aqueous carbonate speciation in equilibrium with aragonite under subduction zone conditions},
+  year          = {2014},
+  volume        = {132},
+  number        = {Supplement C},
+  pages         = {375--390},
+  doi           = {10.1016/j.gca.2014.01.030},
+  issn          = {0016-7037},
 }
 
 @Article{HP97,
@@ -1080,14 +1080,14 @@
 }
 
 @Article{SHD91,
-  author    = {Sverjensky, Dimitri A. and Hemley, J. J. and D'Angelo, W. M.},
-  journal   = {Geochimica et Cosmochimica Acta},
-  title     = {{T}hermodynamic assessment of hydrothermal alkali feldspar-mica-aluminosilicate equilibria},
-  year      = {1991},
-  volume    = {55},
-  number    = {4},
-  pages     = {989--1004},
-  doi       = {10.1016/0016-7037(91)90157-Z},
+  author        = {Sverjensky, Dimitri A. and Hemley, J. J. and D'Angelo, W. M.},
+  journal       = {Geochimica et Cosmochimica Acta},
+  title         = {{T}hermodynamic assessment of hydrothermal alkali feldspar-mica-aluminosilicate equilibria},
+  year          = {1991},
+  volume        = {55},
+  number        = {4},
+  pages         = {989--1004},
+  doi           = {10.1016/0016-7037(91)90157-Z},
 }
 
 @Article{Eva90,
@@ -1177,25 +1177,25 @@
 }
 
 @TechReport{AS04,
-  author      = {Apps, J. and Spycher, N.},
-  title       = {{D}ata qualification for thermodynamic data used to support {THC} calculations},
-  institution = {Bechtel SAIC Company, LLC},
-  year        = {2004},
-  number      = {ANL-NBS-HS-000043 REV 00 (DOC.20041118.0004)},
-  address     = {Las Vegas, NV},
-  pages       = {172},
+  author        = {Apps, J. and Spycher, N.},
+  title         = {{D}ata qualification for thermodynamic data used to support {THC} calculations},
+  institution   = {Bechtel SAIC Company, LLC},
+  year          = {2004},
+  number        = {ANL-NBS-HS-000043 REV 00 (DOC.20041118.0004)},
+  address       = {Las Vegas, NV},
+  pages         = {172},
 }
 
 @Incollection{NA03,
-  author    = {Nordstrom, D. Kirk and Archer, Donald G.},
-  booktitle = {Arsenic in Groundwater},
-  publisher = {Springer},
-  title     = {{A}rsenic thermodynamic data and environmental geochemistry},
-  year      = {2003},
-  editor    = {Welch, Alan H. and Stollenwerk, Kenneth G.},
-  pages     = {1--25},
-  address   = {New York},
-  doi       = {10.1007/0-306-47956-7_1},
+  author        = {Nordstrom, D. Kirk and Archer, Donald G.},
+  booktitle     = {Arsenic in Groundwater},
+  publisher     = {Springer},
+  title         = {{A}rsenic thermodynamic data and environmental geochemistry},
+  year          = {2003},
+  editor        = {Welch, Alan H. and Stollenwerk, Kenneth G.},
+  pages         = {1--25},
+  address       = {New York},
+  doi           = {10.1007/0-306-47956-7_1},
 }
 
 @TechReport{BN91,
@@ -1234,16 +1234,16 @@
 }
 
 @Article{HP11,
-  author    = {Holland, T. J. B. and Powell, R.},
-  journal   = {Journal of Metamorphic Geology},
-  title     = {{A}n improved and extended internally consistent thermodynamic dataset for phases of petrological interest, involving a new equation of state for solids},
-  year      = {2011},
-  volume    = {29},
-  number    = {3},
-  pages     = {333--383},
-  doi       = {10.1111/j.1525-1314.2010.00923.x},
-  sn        = {0263-4929},
-  z9        = {2},
+  author        = {Holland, T. J. B. and Powell, R.},
+  journal       = {Journal of Metamorphic Geology},
+  title         = {{A}n improved and extended internally consistent thermodynamic dataset for phases of petrological interest, involving a new equation of state for solids},
+  year          = {2011},
+  volume        = {29},
+  number        = {3},
+  pages         = {333--383},
+  doi           = {10.1111/j.1525-1314.2010.00923.x},
+  sn            = {0263-4929},
+  z9            = {2},
 }
 
 @Article{HRA91,
@@ -1258,15 +1258,15 @@
 }
 
 @Article{BPAH07,
-  author    = {Pascale B\'en\'ezeth and Donald A. Palmer and Lawrence M. Anovitz and Juske Horita},
-  journal   = {Geochimica et Cosmochimica Acta},
-  title     = {{D}awsonite synthesis and reevaluation of its thermodynamic properties from solubility measurements: {I}mplications for mineral trapping of {CO}$_2$},
-  year      = {2007},
-  volume    = {71},
-  number    = {18},
-  pages     = {4438--4455},
-  doi       = {10.1016/j.gca.2007.07.003},
-  issn      = {0016-7037},
+  author        = {Pascale B\'en\'ezeth and Donald A. Palmer and Lawrence M. Anovitz and Juske Horita},
+  journal       = {Geochimica et Cosmochimica Acta},
+  title         = {{D}awsonite synthesis and reevaluation of its thermodynamic properties from solubility measurements: {I}mplications for mineral trapping of {CO}$_2$},
+  year          = {2007},
+  volume        = {71},
+  number        = {18},
+  pages         = {4438--4455},
+  doi           = {10.1016/j.gca.2007.07.003},
+  issn          = {0016-7037},
 }
 
 @Book{FSR76,
@@ -1281,32 +1281,32 @@
 }
 
 @Article{DS10,
-  author    = {Delgado Martín, Jordi and Soler i Gil, Albert},
-  journal   = {European Journal of Mineralogy},
-  title     = {{I}lvaite stability in skarns from the northern contact of the {M}aladeta batholith, {C}entral {P}yrenees ({S}pain)},
-  year      = {2010},
-  volume    = {22},
-  number    = {3},
-  pages     = {363--380},
-  issn      = {0935-1221},
-  url       = {http://www.ingentaconnect.com/content/10.1127/0935-1221/2010/0022-2021},
+  author        = {Delgado Martín, Jordi and Soler i Gil, Albert},
+  journal       = {European Journal of Mineralogy},
+  title         = {{I}lvaite stability in skarns from the northern contact of the {M}aladeta batholith, {C}entral {P}yrenees ({S}pain)},
+  year          = {2010},
+  volume        = {22},
+  number        = {3},
+  pages         = {363--380},
+  doi           = {10.1127/0935-1221/2010/0022-2021},
+  issn          = {0935-1221},
 }
 
 @Article{AKAE19,
-  author    = {M.R. Azadi and A. Karrech and M. Attar and M. Elchalakani},
-  journal   = {Fluid Phase Equilibria},
-  title     = {{D}ata analysis and estimation of thermodynamic properties of aqueous monovalent metal-glycinate complexes},
-  year      = {2019},
-  volume    = {480},
-  pages     = {25--40},
-  doi       = {10.1016/j.fluid.2018.10.002},
-  issn      = {0378-3812},
+  author        = {M.R. Azadi and A. Karrech and M. Attar and M. Elchalakani},
+  journal       = {Fluid Phase Equilibria},
+  title         = {{D}ata analysis and estimation of thermodynamic properties of aqueous monovalent metal-glycinate complexes},
+  year          = {2019},
+  volume        = {480},
+  pages         = {25--40},
+  doi           = {10.1016/j.fluid.2018.10.002},
+  issn          = {0378-3812},
 }
 
 @Article{AZ10,
   author    = {Akinfiev, N. N. and Zotov, A. V.},
   journal   = {Geochemistry International},
-  title     = {{T}hermodynamic description of aqueous species in the system {C}u-{A}g-{A}u-{S}-{O}-{H} at temperatures of 0-600{A} degrees {C} and pressures of 1-3000 bar},
[TRUNCATED]

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    svnlook diff /svnroot/chnosz -r 453


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