[CHNOSZ-commits] r351 - in pkg/CHNOSZ: . R inst inst/extdata/OBIGT man
noreply at r-forge.r-project.org
noreply at r-forge.r-project.org
Fri Dec 21 16:03:58 CET 2018
Author: jedick
Date: 2018-12-21 16:03:57 +0100 (Fri, 21 Dec 2018)
New Revision: 351
Modified:
pkg/CHNOSZ/DESCRIPTION
pkg/CHNOSZ/R/util.expression.R
pkg/CHNOSZ/inst/NEWS
pkg/CHNOSZ/inst/extdata/OBIGT/biotic_aq.csv.xz
pkg/CHNOSZ/inst/extdata/OBIGT/organic_aq.csv.xz
pkg/CHNOSZ/man/util.expression.Rd
Log:
organic_aq.csv: adjust names of dicarboxylic acid anions
Modified: pkg/CHNOSZ/DESCRIPTION
===================================================================
--- pkg/CHNOSZ/DESCRIPTION 2018-11-11 04:55:31 UTC (rev 350)
+++ pkg/CHNOSZ/DESCRIPTION 2018-12-21 15:03:57 UTC (rev 351)
@@ -1,6 +1,6 @@
-Date: 2018-11-11
+Date: 2018-12-21
Package: CHNOSZ
-Version: 1.1.3-58
+Version: 1.1.3-59
Title: Thermodynamic Calculations and Diagrams for Geo(bio)chemistry
Authors at R: c(
person("Jeffrey", "Dick", , "j3ffdick at gmail.com", role = c("aut", "cre"),
Modified: pkg/CHNOSZ/R/util.expression.R
===================================================================
--- pkg/CHNOSZ/R/util.expression.R 2018-11-11 04:55:31 UTC (rev 350)
+++ pkg/CHNOSZ/R/util.expression.R 2018-12-21 15:03:57 UTC (rev 351)
@@ -299,7 +299,7 @@
}
# make formatted text for thermodynamic system 20170217
-syslab <- function(system = c("K2O", "Al2O3", "SiO2", "H2O"), dash="\u2013") {
+syslab <- function(system = c("K2O", "Al2O3", "SiO2", "H2O"), dash="-") {
for(i in seq_along(system)) {
expr <- expr.species(system[i])
# use en dash here
Modified: pkg/CHNOSZ/inst/NEWS
===================================================================
--- pkg/CHNOSZ/inst/NEWS 2018-11-11 04:55:31 UTC (rev 350)
+++ pkg/CHNOSZ/inst/NEWS 2018-12-21 15:03:57 UTC (rev 351)
@@ -1,4 +1,4 @@
-CHANGES IN CHNOSZ 1.1.3-58 (2018-11-11)
+CHANGES IN CHNOSZ 1.1.3-59 (2018-12-21)
---------------------------------------
NEW FEATURES
@@ -87,6 +87,11 @@
- Change abbreviation of grossular to Grs.
+- Make names for dicarboxylic acid anions from Shock, 1995 (in
+ organic_aq.csv) consistent with those used in later papers, e.g.
+ H-succinate and succinate-2 for the -1 and -2 charged ions. Remove
+ duplicated entries for H-succinate and succinate-2 from biotic_aq.csv.
+
DIAGRAMS
- Lines in 1-D diagram()s can optionally be drawn as splines using the
Modified: pkg/CHNOSZ/inst/extdata/OBIGT/biotic_aq.csv.xz
===================================================================
--- pkg/CHNOSZ/inst/extdata/OBIGT/biotic_aq.csv.xz 2018-11-11 04:55:31 UTC (rev 350)
+++ pkg/CHNOSZ/inst/extdata/OBIGT/biotic_aq.csv.xz 2018-12-21 15:03:57 UTC (rev 351)
@@ -1,85 +1,104 @@
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Modified: pkg/CHNOSZ/inst/extdata/OBIGT/organic_aq.csv.xz
===================================================================
--- pkg/CHNOSZ/inst/extdata/OBIGT/organic_aq.csv.xz 2018-11-11 04:55:31 UTC (rev 350)
+++ pkg/CHNOSZ/inst/extdata/OBIGT/organic_aq.csv.xz 2018-12-21 15:03:57 UTC (rev 351)
@@ -1,4 +1,4 @@
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Áy7Xù2Y(ìCýªõ«dÅÊúøiÚB©cJVB§13pßdeó!WùQ3w1XUÖÈ
+õLw<3a¨=rîCPÌ<V ÷
+>ý4ÓV
+ä®æøWWÛ5K²¥7´ö>Aðñ
+ÆÆ%ÄrDwNA[\¿¾ÆÌÍ°\àZºE°à³æ¥d/ôÊÀÉîÔ] ÿã\jìžýÝÂôEØÈUård¬ÛâË0ýA äÂx3g5kH|~ØgþݰÖ?¡¥1^
°ÇFßÂ^ÈGQhe\[äð ¥»@¼Ý,É[(\,a ¼¾z2uûj·³ÚGôµÌ´g}@©
ϸ2]ï+뼦RÞ]5yÈ1Å|åT|ã$ýÖÁííYëHMQ(ãÎûúhioÝ]#Göþ_<ÐѳÜĺ|pu>t*.ù5WáD¶)^-V
+âæî$óìãl,xmKÈ¢LÒ¸>YûÁê:ðh×cÈ:]ýÛÑÆûä³áYDM"wÉ+uXÂÕub^Îz=-(¨è¾Àh¾ÆÓø.g¢'·
[TRUNCATED]
To get the complete diff run:
svnlook diff /svnroot/chnosz -r 351
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