[Biomod-commits] Plot error.

[Damien Georges]

Hi,

In the example you mentioned I guess that myExpl is a raster object.. 
Not a biomod2 one..
what is returned by the following lines of code?

class(myExpl)
myExpl
image(myExpl)

Is it still not working?

Best,
Damien



On 04/03/2013 14:11, J DL wrote:
> Dear all,
>
> I am running biomod and sometimes I got this error when using the function
> "plot"
>
> plot(myExpl)
> Error in as.double(y) :
>    cannot coerce type 'S4' to vector of type 'double'
>
>   sessionInfo()
> R version 2.15.2 (2012-10-26)
> Platform: x86_64-w64-mingw32/x64 (64-bit)
>
> locale:
> [1] LC_COLLATE=English_United Kingdom.1252
> [2] LC_CTYPE=English_United Kingdom.1252
> [3] LC_MONETARY=English_United Kingdom.1252
> [4] LC_NUMERIC=C
> [5] LC_TIME=English_United Kingdom.1252
>
> attached base packages:
> [1] grid      splines   stats     graphics  grDevices
> [6] utils     datasets  methods   base
>
> other attached packages:
>   [1] lme4_0.999999-0    Matrix_1.0-11
>   [3] gdata_2.12.0       rgl_0.93.928
>   [5] maptools_0.8-23    car_2.0-16
>   [7] gclus_1.3.1        cluster_1.14.3
>   [9] ncdf_1.6.6         mgcv_1.7-22
> [11] earth_3.2-3        plotrix_3.4-6
> [13] plotmo_1.3-2       leaps_2.9
> [15] nlme_3.1-108       rgdal_0.8-5
> [17] foreign_0.8-52     Hmisc_3.10-1
> [19] gam_1.06.2         MASS_7.3-23
> [21] biomod2_2.1.7      pROC_1.5.4
> [23] plyr_1.8           rpart_4.1-0
> [25] randomForest_4.6-7 mda_0.4-2
> [27] class_7.3-5        gbm_2.0-8
> [29] lattice_0.20-13    survival_2.37-4
> [31] nnet_7.3-5         raster_2.0-41
> [33] sp_1.0-5           abind_1.4-0
>
> loaded via a namespace (and not attached):
> [1] gtools_2.7.0  stats4_2.15.2 tools_2.15.2
>
> The more strange thing is that the code runs properly sometimes and others
> does not.
>
> Any clue?
>
> Thanks in advance
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