[Biomod-commits] Cannot find rasters for different rules of ensembleForecasting

Josep M Serra diaz pep.bioalerts at gmail.com
Fri Mar 1 15:28:12 CET 2013


Dear BIOMODers,

I have been running bimod2 for my first time (great vignettes, by the way)
and I am struggling to find the rasters/rasterStack that shows different
ensembleForecasting according to different assembly rules  (e.g. em.cv,
em.mean, etc.). So I ended up running the script of the example to check
whether I was confused or I did something wrong.

...and I found that after running the whole example, I cannot load either
this rasterStack.

I mean this part of the code:


###################################################
### code chunk number 19: EnsembleForecasting_loading_res
###################################################
load("Myocastor/proj_t2050/Myocastor_PA1_AllRun_EM.TSS")
Myocastor_PA1_AllRun_EM.TSS


###################################################
### code chunk number 20: EnsembleForecasting_plotting_res
###################################################
plot(Myocastor_PA1_AllRun_EM.TSS)



QUESTIONS:
1. Where can I find these different ensembles projections?
2. The assembly rule (the way the ensemble is done; mean/median/committee)
does not interfere with 'em.by' value in BIOMOD_EnsembleModeling()
function. Is that correct? I mean, we can always ask to ensamble using the
median of the predictions, or committee, but across different subsets (PA,
PA+algo, all, etc.)

Thanks,

pep


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