[Biomod-commits] Project a single model

[Joaquin DL]

Dear all,

I am trying to project a single model using the BIOMOD_Projection and
BIOMOD_LoadModels function.

BIOMOD_LoadModels functions requires a model description as "RF", but i
would like to load a single model like Test_AllData_Run 19_RF.


I am trying like this:

myBiomodProj <- BIOMOD_Projection(
  modeling.output = myBiomodModelOut ,
  new.env = myExpl ,
  proj.name = 'current' ,
  xy.new.env = NULL ,
  selected.models = BIOMOD_LoadModels(myBiomodModelOut,
models='Test_AllData_RUN11_FDA'),
  binary.meth = 'ROC',
  filtered.meth = NULL,
  compress = 'xz', ##‘xz’, ‘gzip’, NULL
  build.clamping.mask = FALSE,
  clamping.mask = FALSE,
  do.stack = FALSE,
  output.format='.img')

and also like this

myBiomodProj <- BIOMOD_Projection(
  modeling.output = myBiomodModelOut ,
  new.env = myExpl ,
  proj.name = 'current' ,
  xy.new.env = NULL ,
  selected.models =
grep('Test_AllData_RUN11_FDA',getModelsBuiltModels(myBiomodModelOut)),
  binary.meth = 'ROC',##'all', c('KAPPA', 'TSS', 'ROC','FAR', 'SR',
'ACCURACY', 'BIAS', 'POD', 'CSI', 'ETS')
  filtered.meth = NULL,
  compress = 'xz', ##‘xz’, ‘gzip’, NULL
  build.clamping.mask = FALSE,
  clamping.mask = FALSE,
  do.stack = FALSE,
  output.format='.img')

But neither of them works.

Any idea how could I do it?

Thank you very much in advance for your help.

Joaquín