[Biomod-commits] RES: Migration()

[Frederico Mestre]

Dear Wilfried,

 

I had already checked the number of dimensions and I had 3 dimensions in
each file, like this:

 

> dim(Total_consensus_current_Bin)

[1] 11926     1     6

> dim(Total_consensus_proj2020A1_Bin)

[1] 11926     1     6

 

Because I thought BIOMOD was giving this error due to the number of
dimensions being different.

 

Am I doing something wrong?

 

Thanks,

 

Frederico

 

De: Wilfried Thuiller [mailto:wilfried.thuiller at ujf-grenoble.fr] 
Enviada em: terça-feira, 2 de Agosto de 2011 06:19
Para: Frederico Mestre
Cc: biomod-commits at r-forge.wu-wien.ac.at
Assunto: Re: [Biomod-commits] Migration()

 

Dear Frederico,

 

Migration(CurrentPred = Total_consensus_current_Bin[,,1], FutureProj =
Total_consensus_proj2020A1_Bin[,,1], X=coordxy[,1], Y=coordxy[,2],
MaxMigr=2*0.6667,

Pred.Save="Future1.Migration2020")  

 

First: do I have to use the consensus file _Bin or can I use the one with
the probabilities?

 

You have to use a binary vector, yes. I could have make it for probabilities
indeed, but this is not the case at the moment. I might get a look to see
how easy it would be to adapt it. 





Second: I’m getting this error “Error in CurrentPred[, 1] : incorrect number
of dimensions”.

 

try

 

dim(Total_consensus_current_Bin)

 

I guess you have 4 dimensions in Total_consensus_current_Bin. You need to
specific the fourth dimension in the squared brackets. 

 

Total_consensus_current_Bin[,,1,1] something like that. 

 

Cheers,

 

Wilfried





 

What might be happening?

 

Thanks,

 

Frederico Mestre

 

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--------------------------

Dr. Wilfried Thuiller

Laboratoire d'Ecologie Alpine, UMR CNRS 5553

Université Joseph Fourier

BP53, 38041 Grenoble cedex 9, France

tel: +33 (0)4 76 51 44 97

fax: +33 (0)4 76 51 42 79

 

Email: wilfried.thuiller at ujf-grenoble.fr
Personal website: http://www.will.chez-alice.fr
<http://www.will.chez-alice.fr/> 
Team website: http://www-leca.ujf-grenoble.fr/equipes/emabio.htm

FP6 European MACIS project: http://www.macis-project.net
<http://www.macis-project.net/> 
FP6 European EcoChange project: http://www.ecochange-project.eu
<http://www.ecochange-project.eu/> 

 

 

 





 

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