[adegenet-forum] functions not found

brian knaus briank.lists at gmail.com
Wed Jun 2 17:50:15 CEST 2021


Hi Anne,

You have not specified _which_ tutorial you are attempting to follow. So
the forum will not understand what you are trying to do. I suggest
tutorials at the following links.

http://adegenet.r-forge.r-project.org

https://grunwaldlab.github.io/Population_Genetics_in_R/

You have also not posted a minimal reproducible example (
https://stackoverflow.com/a/5963610) which means the forum will not
understand your question and therefore will not be able to address the
issue.

If you check the user's manual at the CRAN site (
https://cran.r-project.org/web/packages/adegenet/index.html) you should see
that ```fstat()``` is not a part of adegenet. So this may not be an
appropriate forum for your question. A google search turns up ```fstat()```
as being part of the library ```hierfstat```, although the page I found was
for hierfstat 0.4-22 (
https://www.rdocumentation.org/packages/hierfstat/versions/0.04-22/topics/fstat).
The version at CRAN (0.5-7;  https://CRAN.R-project.org/package=hierfstat
<https://cran.r-project.org/package=hierfstat>) does not appear to include
```fstat()``` so it could be that this function is now legacy code.

Please take a look into some of this and let us know what you find.

Thanks!
Brian

On Mon, May 31, 2021 at 1:51 PM Anne Chenuil <anne.chenuil at imbe.fr> wrote:

> Many *functions are not found* when I call them using commandes from the
> tutorial (for example: fstat, gstat.randtest, pairwjse.fst), although I use
> just installed adegenet package.
>
> *The adegenet version is 2.1.3  (*which requires* R version ≥ 2.14)*
>
> My* R version is 3.6.2.*
>
> Thank you in advance
>
>
>
> _______________________________________________
> adegenet-forum mailing list
> adegenet-forum at lists.r-forge.r-project.org
> https://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/adegenet-forum
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://lists.r-forge.r-project.org/pipermail/adegenet-forum/attachments/20210602/5c89d7dc/attachment.html>


More information about the adegenet-forum mailing list