[adegenet-forum] Regarding input file in R

[Zhian Kamvar]

Hello,

You should be able to import CSV files with read.csv() and then use df2genind() to convert that to a genind object.

Best,
Zhian

> Date: Thu, 26 Mar 2020 08:53:04 +0530
> From: Jiwan Gurung <geminejeevan at gmail.com>
> To: adegenet-forum at lists.r-forge.r-project.org
> Subject: [adegenet-forum] Regarding input file in R
> Message-ID:
> 	<CAM=3txtJfxQXzYfD19v=-x-q-SvwybXmDyKQz6D8VG1mdG_qtQ at mail.gmail.com>
> Content-Type: text/plain; charset="utf-8"
> 
> Respected Sir/Madam
> I have SSP typing allele frequency data and I want to make clusters and
> dendrogram but I have seen only in the archive that only VCF is made as an
> input file for R. Can I make clusters and dendrogram with CSV file? I
> attached the CSV file.
> 
> I hope to hear from you and learn something new.
> 
> Thank you
> 
> -- 
> Jiwan Gurung
> Research Scholar
> Dept. of Zoology
> Sikkim University
> Mobile No-7797888771
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