[adegenet-forum] DAPC with mtDNA data

Jombart, Thibaut t.jombart at imperial.ac.uk
Mon Jun 1 11:44:33 CEST 2015

Hi Francesca,

I think a bunch of emails have been exchanged on this topic on the forum.

See for instance:

To find them, use the search engine on the adegenet website:

If you don't find your answer, please repost here.


Dr Thibaut Jombart
MRC Centre for Outbreak Analysis and Modelling
Department of Infectious Disease Epidemiology
Imperial College - School of Public Health
Norfolk Place, London W2 1PG, UK
Tel. : 0044 (0)20 7594 3658
Twitter: @thibautjombart

From: adegenet-forum-bounces at lists.r-forge.r-project.org [adegenet-forum-bounces at lists.r-forge.r-project.org] on behalf of Francesca Tassi [tssfnc at unife.it]
Sent: 29 May 2015 11:33
To: adegenet-forum at lists.r-forge.r-project.org
Subject: [adegenet-forum] DAPC with mtDNA data


I'm trying to do a DAPC with a sequence matrix of mtDNA.

Which is the best way to run find.cluster procedure and then DAPC analysis?

Many thanks


Francesca Tassi, PhD
Dipartimento di Scienze della Vita e Biotecnologie
Università di Ferrara
via Borsari 46
I-44121 Ferrara
Phone: +39 0532 455951  Fax: +39 0532 249761

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