[adegenet-forum] snpposi.plot with multiple chromosomes

Harriet Hunt hvh22 at cam.ac.uk
Mon Aug 17 16:52:19 CEST 2015


Hello all,

I have a dataset with SNP positions given as base numbers along 
chromosomes, and the number of the chromosome is in a separate column in 
the original data table. Can anyone suggest a way either to easily 
select and plot the SNPs from one particular chromosome using 
snpposi.plot, without having to extract the data for each chromosome 
manually from the original data table? Or even better would be if 
there's a way to use snpposi.plot to show the density plots for all the 
chromosomes in order.

thanks, Harriet




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