[adegenet-forum] creating genetic data from scratch

Jombart, Thibaut t.jombart at imperial.ac.uk
Tue Oct 21 20:31:26 CEST 2014


Not in adegenet, but there are software around to do this - check out easypop for instance, which outputs files compatible with adegenet.

From: adegenet-forum-bounces at lists.r-forge.r-project.org [adegenet-forum-bounces at lists.r-forge.r-project.org] on behalf of Spencer Bruce [goatsrunfaster at gmail.com]
Sent: 21 October 2014 16:28
To: adegenet-forum at lists.r-forge.r-project.org
Subject: [adegenet-forum] creating genetic data from scratch

Hello All,

Im looking to create some micro-satellite data for a simulation study. Is there  a way to create a data set for a number of individuals, with a given number of loci, and neutral alleles at each loci?

Im basically looking to simulate admixture between two pops but the number of individuals i have actual data for is only 20 or so from each, where I need to create a scenario with hundreds of individuals.

any info would be greatly appreciated!


Spencer A Bruce
200 Washington St.
Troy, NY 12180
518 225 0787
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