[adegenet-forum] error "Miss-formed strings in replacement"

Jombart, Thibaut t.jombart at imperial.ac.uk
Fri Feb 8 15:00:27 CET 2013


can you post a (small) toy dataset to reproduce the error?


From: adegenet-forum-bounces at lists.r-forge.r-project.org [adegenet-forum-bounces at lists.r-forge.r-project.org] on behalf of Gabriel Terraz [gabriel.terraz at univ-lyon1.fr]
Sent: 08 February 2013 13:01
To: adegenet-forum at lists.r-forge.r-project.org
Subject: [adegenet-forum] error "Miss-formed strings in replacement"

I am encountering a problem with the fasta2genlight function:
Here is the error it gives me:

Erreur dans `alleles<-`(`*tmp*`, value = list()) :
   Miss-formed strings in replacement (must be e.g. 'c/g')

It seems that the error is due to SNPs absence in the data file.

Does someone already encountered this error ?

Thanks for your help,


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