[adegenet-forum] Seqtrack coercion into graphNEL

[Joseph Hughes]

Hi,

I have been using SeqTrack from the adegenet R package and it has been
working fine but I have recently installed the package as well as
graph, ape and Rgraphviz on a new computer and I am now getting the
following error message:
________________________________________________
res.g <- as(res, "graphNEL")
Error in as(res, "graphNEL") :
 no method or default for coercing "seqTrack" to "graphNEL"
________________________________________________

This is the sessionInfo for the versions of the packages that are installed:
________________________________________________
R version 2.13.1 (2011-07-08)
Platform: i386-apple-darwin9.8.0/i386 (32-bit)

locale:
[1] en_GB.UTF-8/en_GB.UTF-8/C/C/en_GB.UTF-8/en_GB.UTF-8

attached base packages:
[1] grid      stats     graphics  grDevices utils     datasets  methods   base

other attached packages:
[1] Rgraphviz_1.30.1 graph_1.30.0     adegenet_1.3-1   ade4_1.4-17
 MASS_7.3-13      ape_2.7-3

loaded via a namespace (and not attached):
[1] gee_4.13-17     igraph_0.5.5-2  lattice_0.19-30 nlme_3.1-101    tools_2.13.1
________________________________________________

I would very much appreciate any advice that you can give me.

Kind regards,
Joseph