[adegenet-forum] screeplot (spca)excluding some first few egenvalues
Nevil Amos
nevil.amos at gmail.com
Fri Dec 17 14:03:37 CET 2010
As a flow on from my last query, we have mtDNA data with tow "deep"
distinct clades that alone explain most of the variance, however there
are further eigenvalues for structures 2,3,4 that may still stand out in
the absence of the first value which is orders of magnitude greater than
the others.
Is there some way to plot the scree plot for structures 2:n instead of 1:n?
sort of
screeplot (myspca)[2:n]
where n is the number of values?
cheers
Nevil
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