[adegenet-commits] r1229 - www
noreply at r-forge.r-project.org
noreply at r-forge.r-project.org
Tue Aug 9 14:08:58 CEST 2016
Author: jombart
Date: 2016-08-09 14:08:58 +0200 (Tue, 09 Aug 2016)
New Revision: 1229
Modified:
www/documentation.html
Log:
putting material online for Cumbrae
Modified: www/documentation.html
===================================================================
--- www/documentation.html 2016-08-09 11:48:09 UTC (rev 1228)
+++ www/documentation.html 2016-08-09 12:08:58 UTC (rev 1229)
@@ -88,6 +88,7 @@
+
engine</a><span style="font-family: Helvetica,Arial,sans-serif;">.
</span><br style="font-family: Helvetica,Arial,sans-serif;">
<br style="font-family: Helvetica,Arial,sans-serif;">
@@ -108,8 +109,7 @@
<br style="font-family: Helvetica,Arial,sans-serif;">
<br style="font-family: Helvetica,Arial,sans-serif;">
<span style="color: rgb(0, 102, 0); font-weight: bold;
- font-family: Helvetica,Arial,sans-serif;">Tutorials*</span> <img
- alt="new" src="images/new.png" height="37" width="80"><br>
+ font-family: Helvetica,Arial,sans-serif;">Tutorials*</span> <br>
<font face="Helvetica, Arial, sans-serif">Up-to-date tutorials are
now hosted on Github:<br>
<a target="_top"
@@ -122,6 +122,7 @@
+
</font><br>
<span style="font-weight: bold; color: rgb(0, 102, 0);
font-family: Helvetica,Arial,sans-serif;"><br>
@@ -228,6 +229,7 @@
+
Epidemiology</span> / <i>Public Health</i>: <span
style="font-weight: bold;">Introduction to phylogenetics</span>
(last updated on the 15/13/2013)</li>
@@ -286,6 +288,7 @@
+
Epidemiology</span> / <i>Public Health</i>: <span
style="font-weight: bold;">Introduction to multivariate
analysis / bacterial GWAS</span> (last updated on the
@@ -340,6 +343,7 @@
+
</b><b><i>outbreaker</i></b></li>
<ul>
<li><a href="files/GenEpiTalk.1.0.pdf">talk</a></li>
@@ -380,6 +384,7 @@
+
analysis using <span style="font-style: italic;">ape,
adegenet,</span> </span><b>and </b><b><i>outbreaker</i></b></li>
<ul>
@@ -459,6 +464,7 @@
+
all commands</a>]</li>
<li>An introduction to Genome Wise Association Studies (GWAS)
[<a
@@ -482,21 +488,13 @@
</li>
<li>Multivariate analysis of genetic data: an introduction [<a
href="files/Glasgow2015/lecture-MVA.1.0.pdf">lecture</a>,
- <a href="files/Glasgow2015/practical-MVAintro.1.0.pdf">practical</a>,
- <a
- href="files/Glasgow2015/practical-MVAintro-allCmd.1.0.pdf">practical
-
-
-
- with all commands</a>] </li>
+ <a href="files/Glasgow2015/practical-MVAintro.1.0.pdf">practical</a>]
+ </li>
<li>Multivariate analysis of genetic data: exploring group
diversity [<a
href="files/Glasgow2015/lecture-MVAgroups.1.0.pdf">lecture</a>,
- <a href="files/Glasgow2015/practical-MVAgroups.1.0.pdf">practical</a>,
- <a
- href="files/Glasgow2015/practical-MVAgroups.1.0-allCmds.pdf">practical
-
- with all commands</a>]<br>
+ <a href="files/Glasgow2015/practical-MVAgroups.1.0.pdf">practical</a><a
+href="files/Glasgow2015/practical-MVAgroups.1.0-allCmds.pdf"></a>]<br>
</li>
<li>An introduction to Genome Wise Association Studies (GWAS)
[<a
@@ -507,17 +505,19 @@
<li>Multivariate analysis of genetic data: uncovering spatial
structures [<a
href="files/Glasgow2015/lecture-MVAspatial.1.0.pdf">lecture</a>,
- <a href="files/Glasgow2015/practical-MVAspatial.1.0.pdf">practical</a>]</li>
+ <a href="files/Glasgow2015/practical-MVAspatial.1.0.pdf">practical</a>]<br>
+ <br>
+ </li>
</ul>
<li>Workshop "<span style="font-weight: bold;">Exploratory
methods for population genetics using R</span>" - Barcelona
- (October 2015) <img alt="new" src="images/new.png"
- height="37" width="80"></li>
+ (October 2015) </li>
<ul>
<li>Multivariate analysis of genetic data: an introduction [<a
href="file:///home/thibaut/dev/adegenet/www/files/Barcelona2015/lecture-MVA.1.0.pdf">lecture</a>,
<a
href="file:///home/thibaut/dev/adegenet/www/files/Barcelona2015/practical-MVAintro.1.0.pdf">practical</a>]
+
</li>
<li>Multivariate analysis of genetic data: exploring group
diversity [<a
@@ -527,10 +527,42 @@
<li>Multivariate analysis of genetic data: uncovering spatial
structures [<a
href="files/Barcelona2015/lecture-MVAspatial.1.0.pdf">lecture</a>,
- <a href="files/Barcelona2015/practical-MVAspatial.1.0.pdf">practical</a>]</li>
+ <a href="files/Barcelona2015/practical-MVAspatial.1.0.pdf">practical</a>]<br>
+ <br>
+ </li>
</ul>
+ <li>Workshop "<span style="font-weight: bold;">Genetic data
+ analysis with R</span>" - Cumbrae (August 2016) <img
+ alt="new" src="images/new.png" height="37" width="80"></li>
<ul>
+ <li>Introduction to phylogenetics [<a
+ href="files/PRstats/lecture-phylo.1.0.pdf">lecture</a>, <a
+ href="files/PRstats/practical-introphylo.1.0.pdf">practical</a>]
+ </li>
+ <li>R refresher [<a
+ href="files/PRstats/lecture-refresheR.1.2.pdf">lecture</a>]<br>
+ </li>
+ <li>Multivariate analysis of genetic data: an introduction [<a
+ href="files/PRstats/lecture-MVA.1.0.pdf">lecture</a>, <a
+ href="files/PRstats/practical-MVAintro.1.0.pdf">practical</a>,
+ practical with all commands] </li>
+ <li>Multivariate analysis of genetic data: exploring group
+ diversity [<a href="files/PRstats/lecture-MVAgroups.1.0.pdf">lecture</a>,
+ <a href="files/PRstats/practical-MVAgroups.1.0.pdf">practical</a>,
+ practical with all commands]</li>
+ <li>Multivariate analysis of genetic data: uncovering spatial
+ structures [<a
+ href="files/PRstats/lecture-MVAspatial.1.0.pdf">lecture</a>,
+ <a href="files/PRstats/practical-MVAspatial.1.0.pdf">practical</a>]</li>
+ <li>Reproducible science using R [<a
+ href="files/PRstats/lecture-reprosci.1.2.pdf">lecture</a>,
+ <a href="files/PRstats/foo.Rmd">foo.Rmd</a>, <a
+ href="files/PRstats/bar.Rnw">bar.Rnw</a>]</li>
</ul>
+ <ul>
+ </ul>
+ <ul>
+ </ul>
</ul>
<br style="font-family: Helvetica,Arial,sans-serif;">
<span style="font-weight: bold; color: rgb(0, 102, 0);
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