[adegenet-commits] r1154 - www

[noreply at r-forge.r-project.org]

Author: jombart
Date: 2013-10-07 12:44:50 +0200 (Mon, 07 Oct 2013)
New Revision: 1154

Modified:
   www/documentation.html
Log:
Added new section for workshop in Stockholm

Modified: www/documentation.html
===================================================================
--- www/documentation.html	2013-08-09 12:27:14 UTC (rev 1153)
+++ www/documentation.html	2013-10-07 10:44:50 UTC (rev 1154)
@@ -45,6 +45,7 @@
 
 
 
+
         engine</a>. <br>
       <br>
       <br>
@@ -52,6 +53,7 @@
       <span style="font-weight: bold; color: rgb(0, 102, 0);">Manuals</span><br>
       - the adegenet <span style="font-weight: bold;">manual</span> (<a
 href="http://cran.r-project.org/web/packages/adegenet/adegenet.pdf">pdf</a>),
+
       which compiles all the manpages of the package.<br>
       <br>
       <br>
@@ -113,6 +115,7 @@
 
 
 
+
         1</a> [<a href="files/practical-day1.1.2-allcmd.pdf">version
         with all commands</a>]<br>
           > <a href="files/practical-day2.1.3.pdf">practical
@@ -127,6 +130,7 @@
 
 
 
+
         2</a> [<a href="files/practical-day2.1.3-allcmd.pdf">version
         with all commands</a>]<br>
           > <a href="files/practical-day3.1.2.pdf">practical
@@ -141,6 +145,7 @@
 
 
 
+
         3</a><br>
       <br>
       - MRC methodological session: Introduction to phylogenetics:<br>
@@ -159,6 +164,7 @@
         href="files/fakeOutbreak/cases.csv">cases.csv</a>, <a
         href="files/fakeOutbreak/alignment.fa">alignment.fa</a>, <a
         href="files/fakeOutbreak/update.csv">update.csv</a>)<br>
+      <br>
       - Imperial College - Master <span style="font-style: italic;">Modern
 
 
@@ -170,14 +176,14 @@
 
 
 
+
         Epidemiology</span> / <i>Public Health</i>: <span
-        style="font-weight: bold;">Introduction to phylogenetics</span>.<img
-        style=" width: 80px; height: 37px;" alt="new"
-        src="images/new.png" height="37" width="80"><br>
+        style="font-weight: bold;">Introduction to phylogenetics</span>.<br>
       (last updated on the 15/13/2013)<br>
           > <a href="files/MSc-intro-phylo.1.1.pdf">practical</a><br>
           > data (<a href="files/usflu.fasta">usflu.fasta</a>,
       <a href="files/usflu.annot.csv">usflu.annot.csv</a>)<br>
+      <br>
       - Imperial College - Master <span style="font-style: italic;">Modern
 
 
@@ -189,10 +195,10 @@
 
 
 
+
         Epidemiology</span> / <i>Public Health</i>: <span
         style="font-weight: bold;">Introduction to multivariate analysis
-        / bacterial GWAS</span>.<img style=" width: 80px; height: 37px;"
-        alt="new" src="images/new.png" height="37" width="80"><br>
+        / bacterial GWAS</span>.<br>
       (last updated on the 21/13/2013)<br>
           > <a
         href="files/simGWAS/lecture-MSc-MVA.1.2.pdf">lecture</a><br>
@@ -206,8 +212,8 @@
 
 
 
-      </b><b><i>outbreaker</i></b> <img style=" width: 80px; height:
-        37px;" alt="new" src="images/new.png" height="37" width="80"><br>
+
+      </b><b><i>outbreaker</i></b> <br>
           > <a href="files/GenEpiTalk.1.0.pdf">talk</a><br>
           > <a href="files/outbreakPractical.1.3.pdf">practical</a><br>
           > data (<a
@@ -215,8 +221,21 @@
         href="files/fakeOutbreak/alignment.fa">alignment.fa</a>, <a
         href="files/fakeOutbreak/update.csv">update.csv</a>)<br>
       <br>
+      - Molecular Outbreak Epidemiology workshop, Stockholm, Sweden
+      (November 2013) - <span style="font-weight: bold;">Outbreak
+        analysis using <span style="font-style: italic;">ape, adegenet,</span>
+      </span><b>and </b><b><i>outbreaker</i></b> <img style=" width:
+        80px; height: 37px;" alt="new" src="images/new.png" height="37"
+        width="80"><br>
+          > talk<br>
+          > <a href="files/outbreakPractical.1.2.pdf">practical</a><br>
+          > data (<a
+        href="files/fakeOutbreak/cases.csv">cases.csv</a>, <a
+        href="files/fakeOutbreak/alignment.fa">alignment.fa</a>, <a
+        href="files/fakeOutbreak/update.csv">update.csv</a>)<br>
       <br>
       <br>
+      <br>
       <span style="font-weight: bold; color: rgb(0, 102, 0);">Dirty
         hacks useful for teaching</span><br>
       - a small hack for installing R packages on computers without
@@ -228,9 +247,8 @@
 
 
 
-      <a href="files/hackLib/README">README</a> <img style=" width:
-        80px; height: 37px;" alt="new" src="images/new.png" height="37"
-        width="80"><br>
+
+      <a href="files/hackLib/README">README</a> <br>
       <br>
       <br>
       <span style="font-weight: bold; color: rgb(0, 102, 0);">Mailing