[adegenet-commits] r1156 - www
noreply at r-forge.r-project.org
noreply at r-forge.r-project.org
Fri Nov 15 15:18:46 CET 2013
Author: jombart
Date: 2013-11-15 15:18:46 +0100 (Fri, 15 Nov 2013)
New Revision: 1156
Modified:
www/links.html
Log:
added link to R-epi
Modified: www/links.html
===================================================================
--- www/links.html 2013-10-07 12:17:08 UTC (rev 1155)
+++ www/links.html 2013-11-15 14:18:46 UTC (rev 1156)
@@ -1,10 +1,10 @@
-<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN">
+<!DOCTYPE html PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN">
<html>
-<head>
- <meta content="text/html; charset=ISO-8859-1"
- http-equiv="content-type">
- <title>links</title>
- <script type="text/javascript">
+ <head>
+ <meta content="text/html; charset=windows-1252"
+ http-equiv="content-type">
+ <title>links</title>
+ <script type="text/javascript">
var _gaq = _gaq || [];
_gaq.push(['_setAccount', 'UA-20083187-1']);
@@ -17,113 +17,142 @@
})();
</script>
-</head>
-<body>
-<br>
-<br>
-<br>
-<br>
-<div style="margin-left: 40px;"><img alt="" src="images/bullet.png"
- style="width: 10px; height: 10px;"> Thibaut Jombart's <a
- target="_blank" href="http://sites.google.com/site/thibautjombart/">homepage</a>
-or <a href="http://www1.imperial.ac.uk/medicine/people/t.jombart/">webpage</a>
-at the Imperial College.<br>
-<br>
-<img alt="" src="images/bullet.png" style="width: 10px; height: 10px;">
-adegenet is hosted by <a
- href="https://r-forge.r-project.org/projects/adegenet/" target="_top">R-Forge</a>.<br>
-<br>
-<img alt="" src="images/bullet.png" style="width: 10px; height: 10px;">
-R
-official website is <a href="http://www.r-project.org/" target="_top">here</a>.<br>
-<br>
-<img alt="" src="images/bullet.png" style="width: 10px; height: 10px;">
-Other
-related R packages:<br>
-- <a
- href="http://www.math.univ-toulouse.fr/%7Ebiostat/mixOmics/About_us.html">mixOmics</a>,
-a package for the exploratory analysis of omics data<br>
-- <a href="http://openwetware.org/wiki/Polysat">polysat</a>, a package
-for handling and analysing polyploid microsatellites, including mixed
-ploidy samples<br>
-- <a href="http://ape.mpl.ird.fr/pegas/">pegas</a>, Emmanuel Paradis's
-package implementing classical population genetics tools, compatible
-with adegenet.<br>
-- <a href="http://pbil.univ-lyon1.fr/ADE-4/home.php?lang=eng"
- target="_top">ade4</a>,
-a package for multivariate analysis, graphics, phylogeny and spatial
-statistics.<br>
-- <a href="http://ape.mpl.ird.fr/" target="_top">ape</a>, the
-classical package for
-phylogenetics and evolution by Emmanuel Paradis.<br>
-- adephylo, a package dedicated to the exploration of phylogenetic
-signal in biological traits.<br>
-- <a href="https://r-forge.r-project.org/projects/phylobase/"
- target="_top">phylobase</a>,
-a package implementing classes to handle and manipulate comparative
-data (i.e. phylogeny + traits).<br>
-- <a
- href="http://cran.r-project.org/web/packages/adehabitat/index.html"
- target="_top">adehabitat</a>,
-a package for habitat selection analysis.<br>
-- <a target="_top" href="http://bioinf.ucd.ie/people/aedin/R/">made4</a>,
-a
-package
-for microarray analysis using ade4.<br>
-- <a target="_blank"
- href="http://cran.univ-lyon1.fr/web/packages/ade4TkGUI/index.html">ade4TkGUI</a>,
-a
-Tcl/Tk GUI for ade4.<br>
-- <a target="_blank" href="http://ads2r.free.fr/">ads</a>, a R package
-for spatial
-point patterns analysis.<br>
-- <a href="http://cran.r-project.org/web/packages/genetics/index.html"
- target="_top">genetics</a>,
-a R package for genetic analysis (Hardy-Weinberg equilibrium, linkage
-disequilibrium, definition of the class <span
- style="font-style: italic;">genotype</span>).<br>
-- <a href="http://www2.unil.ch/popgen/softwares/hierfstat.htm"
- target="_top">hierfstat</a>,
-a R package to compute and test for genetic structuration at different
-hierarchical levels.<br>
-- <a target="_top" href="http://mefa.r-forge.r-project.org/">mefa</a>,
-a R package for multivariate count data handling in ecology and
-biogeography.<br>
-<br>
-<img alt="" src="images/bullet.png" style="width: 10px; height: 10px;">
-Other
-related softwares:<br>
-- <a
- href="http://www.genetix.univ-montp2.fr/genetix/intro.htm#abstract"
- target="_top">GENETIX</a><br>
-- <a href="http://www2.unil.ch/popgen/softwares/fstat.htm"
- target="_top">Fstat</a><br>
-- <a href="http://genepop.curtin.edu.au/" target="_top">Genepop</a><br>
-<br>
-<img alt="" src="images/bullet.png" style="width: 10px; height: 10px;">
-Miscellanous:<br>
-- <a href="http://pbil.univ-lyon1.fr/R/enseignement.html" target="_top">biostatistical
-ressources</a> using R from Lyon1 University<br>
-- the <a href="http://rgenetics.org/" target="_top">R genetics project</a>
-<br>
-- the CRAN <a href="http://cran.r-project.org/web/views/Genetics.html"
- target="_top">task
-view genetics</a><br>
-- <a href="http://www.ubuntu.com/" target="_top">Ubuntu</a>, the
-accessible linux
-distribution<br>
-- Péter Sólymos's <a
- href="http://www.univet.hu/users/psolymos/personal/" target="_top">homepage</a><br>
-- the <a target="_top"
- href="https://stat.ethz.ch/mailman/listinfo/r-sig-genetics">R-sig-genetics</a>
-mailing list<br>
-- Tom Schneider's <a target="_top"
- href="http://www-lecb.ncifcrf.gov/%7Etoms/latex.html">page on bibtex
-styles</a> for biologists<br>
-<br>
-<br>
-</div>
-<br>
-<br>
-</body>
+ </head>
+ <body>
+ <br>
+ <br>
+ <br>
+ <br>
+ <div style="margin-left: 40px;"><img alt="" src="images/bullet.png"
+ style="width: 10px; height: 10px;"> Thibaut Jombart's <a
+ target="_blank"
+ href="http://sites.google.com/site/thibautjombart/">homepage</a>
+ or <a
+ href="http://www1.imperial.ac.uk/medicine/people/t.jombart/">webpage</a>
+ at the Imperial College.<br>
+ <br>
+ <img alt="" src="images/bullet.png" style="width: 10px; height:
+ 10px;">
+ adegenet is hosted by <a
+ href="https://r-forge.r-project.org/projects/adegenet/"
+ target="_top">R-Forge</a>.<br>
+ <br>
+ <img alt="" src="images/bullet.png" style="width: 10px; height:
+ 10px;">
+ R
+ official website is <a href="http://www.r-project.org/"
+ target="_top">here</a>.<br>
+ <br>
+ <img alt="" src="images/bullet.png" style="width: 10px; height:
+ 10px;">
+ Other
+ related R packages:<br>
+ - <a
+href="http://www.math.univ-toulouse.fr/%7Ebiostat/mixOmics/About_us.html">mixOmics</a>,
+ a package for the exploratory analysis of omics data<br>
+ - <a href="http://openwetware.org/wiki/Polysat">polysat</a>, a
+ package
+ for handling and analysing polyploid microsatellites, including
+ mixed
+ ploidy samples<br>
+ - <a href="http://ape.mpl.ird.fr/pegas/">pegas</a>, Emmanuel
+ Paradis's
+ package implementing classical population genetics tools,
+ compatible
+ with adegenet.<br>
+ - <a href="http://pbil.univ-lyon1.fr/ADE-4/home.php?lang=eng"
+ target="_top">ade4</a>,
+ a package for multivariate analysis, graphics, phylogeny and
+ spatial
+ statistics.<br>
+ - <a href="http://ape.mpl.ird.fr/" target="_top">ape</a>, the
+ classical package for
+ phylogenetics and evolution by Emmanuel Paradis.<br>
+ - adephylo, a package dedicated to the exploration of phylogenetic
+ signal in biological traits.<br>
+ - <a href="https://r-forge.r-project.org/projects/phylobase/"
+ target="_top">phylobase</a>,
+ a package implementing classes to handle and manipulate
+ comparative
+ data (i.e. phylogeny + traits).<br>
+ - <a
+ href="http://cran.r-project.org/web/packages/adehabitat/index.html"
+ target="_top">adehabitat</a>,
+ a package for habitat selection analysis.<br>
+ - <a target="_top" href="http://bioinf.ucd.ie/people/aedin/R/">made4</a>,
+ a
+ package
+ for microarray analysis using ade4.<br>
+ - <a target="_blank"
+ href="http://cran.univ-lyon1.fr/web/packages/ade4TkGUI/index.html">ade4TkGUI</a>,
+ a
+ Tcl/Tk GUI for ade4.<br>
+ - <a target="_blank" href="http://ads2r.free.fr/">ads</a>, a R
+ package
+ for spatial
+ point patterns analysis.<br>
+ - <a
+ href="http://cran.r-project.org/web/packages/genetics/index.html"
+ target="_top">genetics</a>,
+ a R package for genetic analysis (Hardy-Weinberg equilibrium,
+ linkage
+ disequilibrium, definition of the class <span style="font-style:
+ italic;">genotype</span>).<br>
+ - <a href="http://www2.unil.ch/popgen/softwares/hierfstat.htm"
+ target="_top">hierfstat</a>,
+ a R package to compute and test for genetic structuration at
+ different
+ hierarchical levels.<br>
+ - <a target="_top" href="http://mefa.r-forge.r-project.org/">mefa</a>,
+ a R package for multivariate count data handling in ecology and
+ biogeography.<br>
+ <br>
+ <img alt="" src="images/bullet.png" style="width: 10px; height:
+ 10px;">
+ Other
+ related softwares:<br>
+ - <a
+ href="http://www.genetix.univ-montp2.fr/genetix/intro.htm#abstract"
+ target="_top">GENETIX</a><br>
+ - <a href="http://www2.unil.ch/popgen/softwares/fstat.htm"
+ target="_top">Fstat</a><br>
+ - <a href="http://genepop.curtin.edu.au/" target="_top">Genepop</a><br>
+ <br>
+ <img alt="" src="images/bullet.png" style="width: 10px; height:
+ 10px;" height="10" width="10">
+ The R-epi project: <a
+ href="http://sites.google.com/site/therepiproject/">http://sites.google.com/site/therepiproject/</a><br>
+ <br>
+ <img alt="" src="images/bullet.png" style="width: 10px; height:
+ 10px;">
+ Miscellanous:<br>
+ - <a href="http://pbil.univ-lyon1.fr/R/enseignement.html"
+ target="_top">biostatistical
+ ressources</a> using R from Lyon1 University<br>
+ - the <a href="http://rgenetics.org/" target="_top">R genetics
+ project</a>
+ <br>
+ - the CRAN <a
+ href="http://cran.r-project.org/web/views/Genetics.html"
+ target="_top">task
+ view genetics</a><br>
+ - <a href="http://www.ubuntu.com/" target="_top">Ubuntu</a>, the
+ accessible linux
+ distribution<br>
+ - Péter Sólymos's <a
+ href="http://www.univet.hu/users/psolymos/personal/"
+ target="_top">homepage</a><br>
+ - the <a target="_top"
+ href="https://stat.ethz.ch/mailman/listinfo/r-sig-genetics">R-sig-genetics</a>
+ mailing list<br>
+ - Tom Schneider's <a target="_top"
+ href="http://www-lecb.ncifcrf.gov/%7Etoms/latex.html">page on
+ bibtex
+ styles</a> for biologists<br>
+ <br>
+ <br>
+ </div>
+ <br>
+ <br>
+ </body>
</html>
More information about the adegenet-commits
mailing list