[adegenet-commits] r1151 - www

[noreply at r-forge.r-project.org]

Author: jombart
Date: 2013-06-28 17:43:34 +0200 (Fri, 28 Jun 2013)
New Revision: 1151

Modified:
   www/acceuil.html
   www/news.html
Log:
Added Caitlin to developers

Modified: www/acceuil.html
===================================================================
--- www/acceuil.html	2013-06-24 15:54:36 UTC (rev 1150)
+++ www/acceuil.html	2013-06-28 15:43:34 UTC (rev 1151)
@@ -36,7 +36,8 @@
         It is developed on <a href="http://sourceforge.net/p/adegenet">Sourceforge</a>
         by <a href="http://sites.google.com/site/thibautjombart/">Thibaut
 
-          Jombart</a>, Ismail Ahmed, <a
+
+          Jombart</a>, Ismail Ahmed, Caitlin Collins, <a
           href="http://www.federicocalboli.com/">Federico Calboli</a>, <a
           href="http://www1.imperial.ac.uk/medicine/people/a.cori/">Anne
           Cori</a>, Tobias Erik Reiners, and <a
@@ -65,6 +66,7 @@
 
 
 
+
           the bublisher's website</a>]<br>
         <br>
         <br>
@@ -102,6 +104,7 @@
 
 
 
+
         </span>markers<span style="font-weight: bold;"></span>and<span
           style="font-weight: bold;">presence/absence</span> data<span
           style="font-weight: bold;"><br>
@@ -110,11 +113,13 @@
 
 
 
+
           manipulation</span><br>
         - basic <span style="font-weight: bold;">data information </span>(heterozygosity,
 
 
 
+
         numbers of alleles, sample sizes, ...)<br>
         - <span style="font-weight: bold;">HWE</span> and <span
           style="font-weight: bold;">G-statistic</span> <span
@@ -127,6 +132,7 @@
 
 
 
+
           Fst </span><br>
         - simulation of <span style="font-weight: bold;">hybridization<br>
         </span><span style="font-weight: bold;"></span>- methods for <span
@@ -137,6 +143,7 @@
 
 
 
+
           algorithm<br>
         </span>- the <span style="font-style: italic; font-weight:
           bold;">seqTrack</span><span style="font-weight: bold;">algorithm
@@ -144,6 +151,7 @@
 
 
 
+
         </span>for reconstructing genealogies of haplotypes<span
           style="font-weight: bold;"><br>
         </span>- simulation of <span style="font-weight: bold;">genealogies
@@ -151,6 +159,7 @@
 
 
 
+
           of haplotypes</span><br>
         - Discriminant Analysis of Principal Components (<span
           style="font-weight: bold;">DAPC</span>)<span
@@ -172,24 +181,27 @@
 
 
 
+
         Ismaïl Ahmed (<a href="mailto:ismail.ahmed at inserm.fr">ismail.ahmed at inserm.fr</a>),
-Federico
+Caitlin
+        Collins (<a href="mailto:caitiecollins17 at gmail.com">caitiecollins17 at gmail.com</a>),
+        Federico Calboli (<a href="mailto:f.calboli at imperial.ac.uk">f.calboli at imperial.ac.uk</a>),
 
 
-        Calboli (<a href="mailto:f.calboli at imperial.ac.uk">f.calboli at imperial.ac.uk</a>),
 
-
         Anne Cori (<a href="mailto:a.cori at imperial.ac.uk">a.cori at imperial.ac.uk</a>),
 Tobias
 
 
 
 
+
         Erik Reiners (<a href="mailto:Tobias.Reiners at Senckenberg.de">Tobias.Reiners at Senckenberg.de</a>),
 
 
 
 
+
         Péter Sólymos (<a href="mailto:solymos at ualberta.ca">solymos at ualberta.ca</a>)<br>
         <span style="text-decoration: underline;">Contributors
           (datasets/ideas):</span> Christophe Fraser, Katayoun

Modified: www/news.html
===================================================================
--- www/news.html	2013-06-24 15:54:36 UTC (rev 1150)
+++ www/news.html	2013-06-28 15:43:34 UTC (rev 1151)
@@ -44,14 +44,20 @@
       for a list of all modifications.<br>
       <br>
       <br>
+      28/06/2013 <img style=" width: 80px; height: 37px;" alt=""
+        src="file:///home/thibaut/dev/adegenet/www/images/new.png"><br>
+      Caitlin Collins has joined the development team, and will be
+      implementing DAPC-basec feature-selection procedures.<br>
+      <br>
+      <br>
       18/06/2013 <img style=" width: 80px; height: 37px;" alt=""
         src="images/new.png"><br>
       The development of adegenet has now moved on Sourceforge. The
       adegenet website will remain at its current place. More on:<br>
       <a href="https://sourceforge.net/projects/adegenet/">https://sourceforge.net/projects/adegenet/</a><br>
       <br>
-      05/06/2013 <img style=" width: 80px; height: 37px;" alt=""
-        src="images/new.png"><br>
+      <br>
+      05/06/2013 <br>
       <big>New adegenet version (<span style="color: rgb(255, 0, 0);">1.3-9</span>)
         has been released for R-3.0.1!</big> <span style="color:
         rgb(255, 0, 0);"><span style="color: rgb(0, 0, 0);">New features
@@ -118,6 +124,7 @@
 
 
 
+
           with a possibility of visualization using graphs (</span></span><span
         style="color: rgb(255, 0, 0);"><span style="color: rgb(0, 0,
           0);"><span style="color: rgb(255, 0, 0); font-family:
@@ -208,6 +215,7 @@
 
 
 
+
       </span>package seems to be gone for good from CRAN, but the
       documentation shows how to use <span style="color: rgb(255, 0,
         0); font-family: monospace;">Fst</span> from the <span
@@ -446,6 +454,7 @@
 
 
 
+
           time, the tutorial has been updated at the same time as the
           package release!<br>
           <br>
@@ -586,6 +595,7 @@
 
 
 
+
       The function <span style="font-family: monospace; color: rgb(255,
         0, 0);">chooseCN</span> has a new option to return a list of
       spatial weights defined as the inverse of spatial distances, at a
@@ -626,6 +636,7 @@
 
 
 
+
       Principal Component Analysis (Jombart et al, submitted to
       Heredity), two multivariate spatial tests, and new functionalities
       for Monmonier's algorithm.<br>
@@ -644,6 +655,7 @@
 
 
 
+
         manipulation:</span> new function to separate data by
       population. Accessors to genind and genpop object like with
       matrices using 'foo[ chosenGenotypes, chosenAlleles]'.<br>
@@ -692,6 +704,7 @@
 
 
 
+
       using <span style="font-family: monospace; color: rgb(255, 0,
         0);">sim2pop</span><span style="color: rgb(255, 0, 0);"> </span>data.<br>
       <span style="font-weight: bold;"><br>