[adegenet-commits] r1073 - www

Mon Feb 18 16:56:00 CET 2013

Author: jombart
Date: 2013-02-18 16:56:00 +0100 (Mon, 18 Feb 2013)
New Revision: 1073

Modified:
   www/literature.html
Log:
+1 ref

Modified: www/literature.html
===================================================================

--- www/literature.html	2013-02-14 14:32:58 UTC (rev 1072)
+++ www/literature.html	2013-02-18 15:56:00 UTC (rev 1073)
@@ -51,6 +51,7 @@
 to
 
 
+
         the bublisher's website</a><span style="color: rgb(0, 153, 0);">]</span>
       <br style="color: rgb(0, 153, 0);">
       <br>
@@ -71,11 +72,13 @@
 href="http://www.nature.com/hdy/journal/vaop/ncurrent/abs/hdy2008130a.html">free
 
 
+
         abstract</a>]<br>
       <br>
       - the paper presenting the <span style="font-style: italic;">spatial
 
 
+
         principal component analysis</span> (<span style="font-style:
         italic;">sPCA</span>, function <span style="font-family:
         monospace; color: rgb(255, 0, 0);">spca</span>), global and
@@ -84,6 +87,7 @@
         monospace; color: rgb(255, 0, 0);">local.rtest</span>):<br>
       <b>Jombart T, </b>Devillard S, Dufour AB, Pontier D<b></b>(2008)<b></b>Revealing
 
+
       cryptic spatial patterns in genetic variability by a new
       multivariate method.  <span style="font-style: italic;">Heredity</span>
       <span style="font-weight: bold;">101</span>: 92-103. doi:
@@ -93,6 +97,7 @@
 href="http://www.nature.com/hdy/journal/vaop/ncurrent/abs/hdy200834a.html">free
 
 
+
         abstract</a>]<br>
     </div>
     <br>
@@ -104,6 +109,7 @@
 and
 
 
+
       simulations of genealoies of haplotypes (<span style="font-family:
         monospace; color: rgb(255, 0, 0);">haploGen</span>):<br>
       <b>Jombart T, </b>Eggo RM, Dodd PJ, Balloux F (2010)
@@ -115,6 +121,7 @@
 Analysis
 
 
+
         of Principal Components</span> (<span style="font-style:
         italic;">DAPC</span>, functions <span style="font-family:
         monospace;"><span style="color: rgb(255, 0, 0);">find.clusters</span>
@@ -146,6 +153,7 @@
       identification in the rhesus macaque (<em>Macaca mulatta</em>). <span
         class="citation-abbreviation"><span style="font-style: italic;">BMC
 
+
           Genomics</span></span><span class="citation-publication-date"></span><span
         style="font-weight: bold;" class="citation-volume">9</span><span
         class="citation-issue"></span>: 256.<br>
@@ -163,6 +171,7 @@
         AI (2009). Hybridization between escaped domestic and wild
         American mink (<span style="font-style: italic;">Neovison vison</span>).
 
+
         <span style="font-style: italic;">Molecular Ecology</span> <span
           style="font-weight: bold;">18</span>: 1175-1186.<br>
         <br>
@@ -170,8 +179,10 @@
         Age-specific effect of heterozygosity on survival in alpine
         marmots, <span class="i"><span style="font-style: italic;">Marmota
 
+
             marmota</span>.</span><span style="font-style: italic;">Molecular
 
+
           Ecology</span> <span style="font-weight: bold;">18</span>:
         1491-1503.<br>
         <br>
@@ -213,6 +224,7 @@
         (2010) Molecular data provide strong evidence of natural
         hybridization between native and introduced lineages of <i>Phragmites
 
+
           australis</i> in North America. <span style="font-style:
           italic;">Biological Invasions</span>. doi:
         10.1007/s10530-010-9699-6.<br>
@@ -358,12 +370,14 @@
           native mares. <a style="font-style: italic;" title="Biology
             letters.">Biol Lett.</a><span style="font-style: italic;"></span>2010
 
+
           Oct 6. [Epub ahead of print]<br>
         </p>
         <p class="auth_list">[24] SANTOS, H., BURBAN, C., ROUSSELET, J.,
           ROSSI, J.-P., BRANCO, M. and KERDELHUÉ, C. , Incipient
           allochronic speciation in the pine processionary moth (<em>Thaumetopoea
 
+
             pityocampa</em>, Lepidoptera, Notodontidae). <span
             style="font-style: italic;">Journal of Evolutionary Biology</span>,
           no. doi: 10.1111/j.1420-9101.2010.02147.x<br>
@@ -375,10 +389,12 @@
           studies and perspectives. <span style="font-style: italic;">Collect.
 
 
+
             Vol. Sci. Pap. ICCAT</span>, 65(3): 988-995</p>
         <p class="intro">[26] <span class="citation_author">Vandewoestijne
 
 
+
             S, </span> <span class="citation_author">Van Dyck H, </span>
           <span class="citation_date">2010</span> <span
             class="citation_article_title">Population Genetic
@@ -386,6 +402,7 @@
             Recently Colonized Habitat in a Butterfly. </span> <span
             style="font-style: italic;" class="citation_journal_title">PLoS
 
+
             ONE</span><span class="citation_issue">5(11):</span> <span
             class="citation_start_page">e13810.</span> <span
             class="citation_doi">doi:10.1371/journal.pone.0013810<br>
@@ -404,6 +421,7 @@
           (<i>Macaca mulatta</i>). <span style="font-style: italic;">Primates: 
 
 
+
           </span><span class="doi"><span class="label">DOI:</span> <span
               class="value">10.1007/s10329-010-0232-4<br>
             </span></span></p>
@@ -459,6 +477,7 @@
           ecological population connectivity suggests low demands on
           self-recruitment in a tropical inshore marine fish (<em>Eleutheronema
 
+
             tetradactylum</em>: Polynemidae). Molecular Ecology,
           20: no. doi: 10.1111/j.1365-294X.2011.05097.x<br>
         </p>
@@ -472,6 +491,7 @@
             class="citation_article_title">Low Diversity <i>Cryptococcus
 
 
+
               neoformans</i> Variety <i>grubii</i> Multilocus Sequence
             Types from Thailand Are Consistent with an Ancestral African
             Origin.</span> <span class="citation_journal_title">PLoS
@@ -491,6 +511,7 @@
           Bonnabau, F. Collinet, R. Boukhari, D. Blanchet, S. Simon, B.
           Carme, M.-L. Dardé (<span style="font-style: italic;">in
 
+
             press</span>) Human impact on genetic diversity of <span
             style="font-style: italic;">Toxoplasma gondii</span>:
           Example of the anthropized environment from French Guiana. <br>
@@ -513,6 +534,7 @@
           Allozyme Variation in Diploid, Polyploid and Mixed-Ploidy
           Populations of the <span style="font-style: italic;">Pilosella
 
+
             alpicola</span> Group (Asteraceae): Relation to Morphology,
           Origin of Polyploids and Breeding System . Folia Geobotanica:
           1-24. Doi: 10.1007/s12224-011-9102-0<br>
@@ -723,6 +745,7 @@
         GENETICA - <span style="font-style: italic;">Online first. </span>DOI:
 
 
+
         10.1007/s10709-012-9640-2<br>
         <br>
         [76] Samantha Baldwin, Meeghan Pither-Joyce, Kathryn Wright,
@@ -1178,8 +1201,13 @@
           Under-Sampled Sites. PLoS ONE 8(2): e56204.
           doi:10.1371/journal.pone.0056204<br>
         </p>
+        [153]* Valerie De Waele, Frederik Van den Broeck, Tine Huyse,
+        Guy McGrath, Isabella Higgins, Niko Speybroeck, Marco Berzano,
+        Pat Raleigh, Grace M. Mulcahy and Thomas M. Murphy (2013)
+        Panmictic structure of the Cryptosporidium parvum population in
+        Irish calves: Influence of prevalence and host movement. AEM.
+        doi: 10.1128/AEM.03613-12<br>
         <br>
-        <br>
         <p></p>
         <p class="intro">* adegenet not or wrongly cited, but actually
           used in the paper. <br>

