[adegenet-commits] r961 - www
noreply at r-forge.r-project.org
noreply at r-forge.r-project.org
Mon Sep 19 23:22:58 CEST 2011
Author: jombart
Date: 2011-09-19 23:22:57 +0200 (Mon, 19 Sep 2011)
New Revision: 961
Modified:
www/acceuil.html
www/literature.html
Log:
added 2nd ref for adegenet.
Modified: www/acceuil.html
===================================================================
--- www/acceuil.html 2011-09-15 15:12:49 UTC (rev 960)
+++ www/acceuil.html 2011-09-19 21:22:57 UTC (rev 961)
@@ -1,147 +1,176 @@
-<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN">
-<html>
-<head>
- <meta content="text/html; charset=ISO-8859-1"
- http-equiv="content-type">
- <title>adegenet on the web</title>
- <script type="text/javascript">
-
- var _gaq = _gaq || [];
- _gaq.push(['_setAccount', 'UA-20083187-1']);
- _gaq.push(['_trackPageview']);
-
- (function() {
- var ga = document.createElement('script'); ga.type = 'text/javascript'; ga.async = true;
- ga.src = ('https:' == document.location.protocol ? 'https://ssl' : 'http://www') + '.google-analytics.com/ga.js';
- var s = document.getElementsByTagName('script')[0]; s.parentNode.insertBefore(ga, s);
- })();
-
- </script>
-</head>
-<body>
-<div style="margin-left: 40px; text-align: center;"><img
- style="width: 600px; height: 90px;" alt="title" src="images/title.png"><br>
-<br>
-<br>
-<br>
-<div style="text-align: left;"><span style="font-weight: bold;">adegenet</span>
-is an <span style="text-decoration: underline;"><a
- href="http://www.r-project.org/" target="_top"><img alt=""
- src="images/R.png"
- style="border: 0px solid ; width: 30px; height: 23px;"></a></span>
-package dedicated to the exploratory analysis of genetic data. It
-implements a set of tools ranging from multivariate methods to spatial
-genetics and genome-wise SNP data analysis. <br>
-<br>
-It is developed on <a
- href="https://r-forge.r-project.org/projects/adegenet/" target="_top">R-Forge</a>
-by <a href="http://sites.google.com/site/thibautjombart/">Thibaut
-Jombart</a> and Ismail Ahmed, and officially released on <a
- href="http://cran.r-project.org">CRAN</a> periodically.
-<br>
-<br>
-adegenet is described in the following application note:<br>
-<span style="font-style: italic;"></span>Jombart T. (<span
- style="font-style: italic;"></span>2008)<span
- style="font-weight: bold;"> </span>adegenet: a R
-package for the multivariate analysis of genetic markers. <span
- style="font-style: italic;">Bioinformatics</span> <span
- style="font-weight: bold;">24</span>: 1403-1405. doi:
-10.1093/bioinformatics/btn129
-[<a
- href="http://bioinformatics.oxfordjournals.org/cgi/reprint/btn129?ijkey=6sqx5BTXCdYtBZz&keytype=ref">link</a>
-to a free pdf]<br>
-<br>
-<div style="text-align: center;"><img
- style="width: 600px; height: 451px;" alt="" src="images/acceuil.png"><br>
-<br>
-</div>
-<div style="text-align: left;">
-<div style="text-align: center;"><small>sPCA, DAPC, typological
-coherence of markers, Monmonier algorithm, ...<br>
-<br>
-</small></div>
-<small><br>
-</small><span style="text-decoration: underline;">Main features of
-adegenet are:</span><br>
-- data representation (<span style="font-weight: bold;">classes</span>)
-suitable for multivariate analysis<br>
-</div>
-- data <span style="font-weight: bold;">import</span> from GENETIX,
-STRUCTURE, Genepop, Fstat, Easypop, or any dataframe of genotypes<br>
-- data import from <span style="font-weight: bold;">aligned DNA
-sequences</span> to <span style="font-weight: bold;">SNPs</span><br>
-- data import from <span style="font-weight: bold;">aligned protein
-sequences</span> to polymorphic sites<span style="font-weight: bold;"></span>
-<br>
-- data <span style="font-weight: bold;">export</span> to the R
-packages genetics, hierfstat, LDheatmap<br>
-- handling of <span style="font-weight: bold;">different levels of
-ploidy<br>
-</span>- handling of <span style="font-weight: bold;">codominant </span>markers<span
- style="font-weight: bold;"> </span>and<span style="font-weight: bold;">
-presence/absence</span> data<span style="font-weight: bold;"><br>
-</span>- basic and advanced <span style="font-weight: bold;">data
-manipulation</span><br>
-- basic <span style="font-weight: bold;">data information </span>(heterozygosity,
-numbers
-of
-alleles,
-sample
-sizes,
-...)<br>
-- <span style="font-weight: bold;">HWE</span> and <span
- style="font-weight: bold;">G-statistic</span> <span
- style="font-weight: bold;">tests</span>, F statistics implemented for
-adegenet
-objects<br>
-- computation of <span style="font-weight: bold;">genetic</span> <span
- style="font-weight: bold;">distances<br>
-</span>- computation of <span style="font-weight: bold;">pairwise Fst </span><br>
-- simulation of <span style="font-weight: bold;">hybridization<br>
-</span><span style="font-weight: bold;"></span>- methods for <span
- style="font-weight: bold;">spatial
-genetics: sPCA, </span><span style="font-weight: bold;">tests for
-global and local
-structuring, </span><span style="font-weight: bold;">Monmonier
-algorithm<br>
-</span>- the <span style="font-style: italic; font-weight: bold;">seqTrack</span><span
- style="font-weight: bold;">
-algorithm </span>for reconstructing genealogies of haplotypes<span
- style="font-weight: bold;"><br>
-</span>- simulation of <span style="font-weight: bold;">genealogies of
-haplotypes</span><br>
-- Discriminant Analysis of Principal Components (<span
- style="font-weight: bold;">DAPC</span>)<span style="font-weight: bold;">
-</span><br>
-- efficient genome-wise SNP data handling and analysis <img
- style="width: 80px; height: 37px;" alt="" src="images/new.png"><br>
-- extraction of SNP data from genomic alignments <img
- style="width: 80px; height: 37px;" alt="" src="images/new.png"><br>
-<span style="font-weight: bold;"><br>
-<span style="text-decoration: underline; font-weight: bold;">Maintainer</span></span><span
- style="text-decoration: underline; font-weight: bold;">:</span>
-Thibaut
-Jombart
-(<a target="_new" href="http://sites.google.com/site/thibautjombart/">website</a>)<br>
-<span style="text-decoration: underline;">Developers:</span> Thibaut
-Jombart (<a href="mailto:tjombart at imperial.ac.uk">tjombart at imperial.ac.uk</a>),
-Ismaïl
-Ahmed
-(<a href="mailto:ismail.ahmed at inserm.fr">ismail.ahmed at inserm.fr</a>)<br>
-<span style="text-decoration: underline;">Contributors
-(functions/datasets):</span>
-Péter
-Sólymos, Francois Balloux, Katayoun Moazami-Goudarzi & Denis
-Laloë,
-Dominique Pontier, Daniel Maillard<span style="font-weight: bold;"><br>
-<br>
-<br style="font-weight: bold;">
-Suggestions, comments and contributions are most welcome!</span><br>
-<br>
-<br>
-<br>
-<span style="font-weight: bold;"></span></div>
-</div>
-</body>
-</html>
+<!DOCTYPE html PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN">
+<html>
+ <head>
+ <meta content="text/html; charset=ISO-8859-1"
+ http-equiv="content-type">
+ <title>adegenet on the web</title>
+ <script type="text/javascript">
+
+ var _gaq = _gaq || [];
+ _gaq.push(['_setAccount', 'UA-20083187-1']);
+ _gaq.push(['_trackPageview']);
+
+ (function() {
+ var ga = document.createElement('script'); ga.type = 'text/javascript'; ga.async = true;
+ ga.src = ('https:' == document.location.protocol ? 'https://ssl' : 'http://www') + '.google-analytics.com/ga.js';
+ var s = document.getElementsByTagName('script')[0]; s.parentNode.insertBefore(ga, s);
+ })();
+
+ </script>
+ </head>
+ <body>
+ <div style="margin-left: 40px; text-align: center;"><img
+ style="width: 600px; height: 90px;" alt="title"
+ src="images/title.png"><br>
+ <br>
+ <br>
+ <br>
+ <div style="text-align: left;"><span style="font-weight: bold;">adegenet</span>
+ is an <span style="text-decoration: underline;"><a
+ href="http://www.r-project.org/" target="_top"><img alt=""
+ src="images/R.png" style="border: 0px solid ; width: 30px;
+ height: 23px;"></a></span>
+ package dedicated to the exploratory analysis of genetic data.
+ It
+ implements a set of tools ranging from multivariate methods to
+ spatial
+ genetics and genome-wise SNP data analysis. <br>
+ <br>
+ It is developed on <a
+ href="https://r-forge.r-project.org/projects/adegenet/"
+ target="_top">R-Forge</a>
+ by <a href="http://sites.google.com/site/thibautjombart/">Thibaut
+ Jombart</a> and Ismail Ahmed, and officially released on <a
+ href="http://cran.r-project.org">CRAN</a> periodically.
+ <br>
+ <br>
+ adegenet is described in the following application notes:<br>
+ <span style="font-style: italic;"></span>Jombart T. (<span
+ style="font-style: italic;"></span>2008)<span
+ style="font-weight: bold;"> </span>adegenet: a R
+ package for the multivariate analysis of genetic markers. <span
+ style="font-style: italic;">Bioinformatics</span> <span
+ style="font-weight: bold;">24</span>: 1403-1405. doi:
+ 10.1093/bioinformatics/btn129
+ [<a
+href="http://bioinformatics.oxfordjournals.org/cgi/reprint/btn129?ijkey=6sqx5BTXCdYtBZz&keytype=ref">link</a>
+ to a free pdf]<br>
+ <br>
+ Jombart T. and Ahmed I. (2011) <span style="font-style:
+ italic;">adegenet 1.3-1</span>: new tools for the analysis of
+ genome-wide SNP data. <span style="font-style: italic;">Bioinformatics</span>.
+ doi: 10.1093/bioinformatics/btr521 [<a
+href="http://bioinformatics.oxfordjournals.org/content/early/2011/09/16/bioinformatics.btr521">link
+ to the bublisher's website</a>]<br>
+ <br>
+ <br>
+ <div style="text-align: center;"><img style="width: 600px;
+ height: 451px;" alt="" src="images/acceuil.png"><br>
+ <br>
+ </div>
+ <div style="text-align: left;">
+ <div style="text-align: center;"><small>sPCA, DAPC,
+ typological
+ coherence of markers, Monmonier algorithm, ...<br>
+ <br>
+ </small></div>
+ <small><br>
+ </small><span style="text-decoration: underline;">Main
+ features of
+ adegenet are:</span><br>
+ - data representation (<span style="font-weight: bold;">classes</span>)
+ suitable for multivariate analysis<br>
+ </div>
+ - data <span style="font-weight: bold;">import</span> from
+ GENETIX,
+ STRUCTURE, Genepop, Fstat, Easypop, or any dataframe of
+ genotypes<br>
+ - data import from <span style="font-weight: bold;">aligned DNA
+ sequences</span> to <span style="font-weight: bold;">SNPs</span><br>
+ - data import from <span style="font-weight: bold;">aligned
+ protein
+ sequences</span> to polymorphic sites<span style="font-weight:
+ bold;"></span>
+ <br>
+ - data <span style="font-weight: bold;">export</span> to the R
+ packages genetics, hierfstat, LDheatmap<br>
+ - handling of <span style="font-weight: bold;">different levels
+ of
+ ploidy<br>
+ </span>- handling of <span style="font-weight: bold;">codominant
+ </span>markers<span style="font-weight: bold;"> </span>and<span
+ style="font-weight: bold;">
+ presence/absence</span> data<span style="font-weight: bold;"><br>
+ </span>- basic and advanced <span style="font-weight: bold;">data
+ manipulation</span><br>
+ - basic <span style="font-weight: bold;">data information </span>(heterozygosity,
+ numbers
+ of
+ alleles,
+ sample
+ sizes,
+ ...)<br>
+ - <span style="font-weight: bold;">HWE</span> and <span
+ style="font-weight: bold;">G-statistic</span> <span
+ style="font-weight: bold;">tests</span>, F statistics
+ implemented for
+ adegenet
+ objects<br>
+ - computation of <span style="font-weight: bold;">genetic</span>
+ <span style="font-weight: bold;">distances<br>
+ </span>- computation of <span style="font-weight: bold;">pairwise
+ Fst </span><br>
+ - simulation of <span style="font-weight: bold;">hybridization<br>
+ </span><span style="font-weight: bold;"></span>- methods for <span
+ style="font-weight: bold;">spatial
+ genetics: sPCA, </span><span style="font-weight: bold;">tests
+ for
+ global and local
+ structuring, </span><span style="font-weight: bold;">Monmonier
+ algorithm<br>
+ </span>- the <span style="font-style: italic; font-weight:
+ bold;">seqTrack</span><span style="font-weight: bold;">
+ algorithm </span>for reconstructing genealogies of haplotypes<span
+ style="font-weight: bold;"><br>
+ </span>- simulation of <span style="font-weight: bold;">genealogies
+ of
+ haplotypes</span><br>
+ - Discriminant Analysis of Principal Components (<span
+ style="font-weight: bold;">DAPC</span>)<span
+ style="font-weight: bold;">
+ </span><br>
+ - efficient genome-wise SNP data handling and analysis <img
+ style="width: 80px; height: 37px;" alt="" src="images/new.png"><br>
+ - extraction of SNP data from genomic alignments <img
+ style="width: 80px; height: 37px;" alt="" src="images/new.png"><br>
+ <span style="font-weight: bold;"><br>
+ <span style="text-decoration: underline; font-weight: bold;">Maintainer</span></span><span
+ style="text-decoration: underline; font-weight: bold;">:</span>
+ Thibaut
+ Jombart
+ (<a target="_new"
+ href="http://sites.google.com/site/thibautjombart/">website</a>)<br>
+ <span style="text-decoration: underline;">Developers:</span>
+ Thibaut
+ Jombart (<a href="mailto:tjombart at imperial.ac.uk">tjombart at imperial.ac.uk</a>),
+ Ismaïl
+ Ahmed
+ (<a href="mailto:ismail.ahmed at inserm.fr">ismail.ahmed at inserm.fr</a>)<br>
+ <span style="text-decoration: underline;">Contributors
+ (functions/datasets):</span>
+ Péter
+ Sólymos, Francois Balloux, Katayoun Moazami-Goudarzi
+ & Denis
+ Laloë,
+ Dominique Pontier, Daniel Maillard<span style="font-weight:
+ bold;"><br>
+ <br>
+ <br style="font-weight: bold;">
+ Suggestions, comments and contributions are most welcome!</span><br>
+ <br>
+ <br>
+ <br>
+ <span style="font-weight: bold;"></span></div>
+ </div>
+ </body>
+</html>
Modified: www/literature.html
===================================================================
--- www/literature.html 2011-09-15 15:12:49 UTC (rev 960)
+++ www/literature.html 2011-09-19 21:22:57 UTC (rev 961)
@@ -25,21 +25,36 @@
<div style="margin-left: 40px;"><span style="text-decoration:
underline;">To cite adegenet:</span><br>
<br>
- <span style="font-weight: bold; color: rgb(0, 153, 0);">Jombart T.</span><span
- style="color: rgb(0, 153, 0);"> (</span><span style="font-style:
- italic; color: rgb(0, 153, 0);"></span><span style="color:
- rgb(0, 153, 0);">2008)</span><span style="font-weight: bold;
- color: rgb(0, 153, 0);"> </span><span style="color: rgb(0, 153,
- 0);">adegenet: a R package for the multivariate analysis of
- genetic markers. </span><span style="font-style: italic; color:
- rgb(0, 153, 0);">Bioinformatics</span><span style="color: rgb(0,
- 153, 0);"> </span><span style="font-weight: bold; color: rgb(0,
- 153, 0);">24</span><span style="color: rgb(0, 153, 0);">:
- 1403-1405. doi: 10.1093/bioinformatics/btn129 [</span><a
- style="color: rgb(0, 153, 0);"
+ <span style="color: rgb(0, 153, 0);">Jombart T</span><span
+ style="color: rgb(0, 153, 0);">.</span><span style="color:
+ rgb(0, 153, 0);"> (</span><span style="font-style: italic;
+ color: rgb(0, 153, 0);"></span><span style="color: rgb(0, 153,
+ 0);">2008)</span><span style="font-weight: bold; color: rgb(0,
+ 153, 0);"> </span><span style="color: rgb(0, 153, 0);">adegenet:
+ a R package for the multivariate analysis of genetic markers. </span><span
+ style="font-style: italic; color: rgb(0, 153, 0);">Bioinformatics</span><span
+ style="color: rgb(0, 153, 0);"> </span><span
+ style="font-weight: bold; color: rgb(0, 153, 0);">24</span><span
+ style="color: rgb(0, 153, 0);">: 1403-1405. doi:
+ 10.1093/bioinformatics/btn129 [</span><a style="color: rgb(0,
+ 153, 0);"
href="http://bioinformatics.oxfordjournals.org/cgi/reprint/btn129?ijkey=6sqx5BTXCdYtBZz&keytype=ref">link</a><span
- style="color: rgb(0, 153, 0);"> to a free pdf]</span><br
- style="color: rgb(0, 153, 0);">
+ style="color: rgb(0, 153, 0);"> to a free pdf]</span><br>
+ <br>
+ <span style="color: rgb(0, 153, 0);">Jombart T. and Ahmed I.
+ (2011) </span><span style="font-style: italic; color: rgb(0,
+ 153, 0);">adegenet 1.3-1</span><span style="color: rgb(0, 153,
+ 0);">: new tools for the analysis of genome-wide SNP data. </span><span
+ style="font-style: italic; color: rgb(0, 153, 0);">Bioinformatics</span><span
+ style="color: rgb(0, 153, 0);">. doi:
+ 10.1093/bioinformatics/btr521 [</span><a style="color: rgb(0,
+ 153, 0);"
+href="http://bioinformatics.oxfordjournals.org/content/early/2011/09/16/bioinformatics.btr521">link
+
+ to the bublisher's website</a><span style="color: rgb(0, 153,
+ 0);">]</span> <img style="width: 80px; height: 37px;" alt=""
+ src="images/new.png"><br style="color: rgb(0, 153, 0);">
+ <br>
<br style="color: rgb(0, 153, 0);">
<br>
<span style="text-decoration: underline;">Related publications:<br>
@@ -55,11 +70,13 @@
href="http://www.nature.com/hdy/journal/vaop/ncurrent/pdf/hdy2008130a.pdf">link</a>
to the journal's pdf - <a target="_new"
href="http://www.nature.com/hdy/journal/vaop/ncurrent/abs/hdy2008130a.html">free
+
abstract</a>]<br>
<br>
- the paper presenting the <span style="font-style: italic;">spatial
principal
+
component analysis</span> (<span style="font-style: italic;">sPCA</span>,
function <span style="font-family: monospace; color: rgb(255, 0,
@@ -74,6 +91,7 @@
href="http://www.nature.com/hdy/journal/vaop/ncurrent/pdf/hdy200834a.pdf">link</a>
on the journal's website - <a target="_new"
href="http://www.nature.com/hdy/journal/vaop/ncurrent/abs/hdy200834a.html">free
+
abstract</a>]<br>
</div>
@@ -83,6 +101,7 @@
font-weight: bold;"></span>- the paper presenting the <span
style="font-style: italic;">SeqTrack </span>algorithm (<span
style="font-family: monospace; color: rgb(255, 0, 0);">seqTrack</span>),
+
and simulations of genealoies of haplotypes (<span
style="font-family: monospace; color: rgb(255, 0, 0);">haploGen</span>):<br>
@@ -92,6 +111,7 @@
10.1038/hdy.2010.78<br>
<br>
- the paper introducing the <span style="font-style: italic;">Discriminant
+
Analysis of Principal Components</span> (<span
style="font-style: italic;">DAPC</span>, functions <span
@@ -104,11 +124,12 @@
the analysis of genetically structured populations. <i>BMC
Genetics</i> <strong>11</strong><strong>:</strong>94. <span>doi:10.1186/1471-2156-11-94</span>
[<a href="files/DAPCpaper.pdf">free pdf</a>] [<a
- href="http://www.biomedcentral.com/1471-2156/11/94">free
- html version</a>] [<a href="reviewDAPC.html">evaluation by
- Laurent Excoffier on F1000</a>] <br>
+ href="http://www.biomedcentral.com/1471-2156/11/94">free html
+ version</a>] [<a href="reviewDAPC.html">evaluation by Laurent
+ Excoffier on F1000</a>] <br>
<br>
<br>
+ <br>
<span style="text-decoration: underline;">Publications citing
adegenet:</span><br style="text-decoration: underline;">
<br>
@@ -123,6 +144,7 @@
VS, Smith DG (2008) Pyrosequencing as a method for SNP
identification in the rhesus macaque (<em>Macaca mulatta</em>). <span
class="citation-abbreviation"><span style="font-style: italic;">BMC
+
Genomics</span></span><span class="citation-publication-date">
</span><span style="font-weight: bold;" class="citation-volume">9</span><span
@@ -140,6 +162,7 @@
[4] Kidd, AG, Bowman J, Lesbarrères D, Schulte-Hostedde
AI (2009). Hybridization between escaped domestic and wild
American mink (<span style="font-style: italic;">Neovison vison</span>).
+
<span style="font-style: italic;">Molecular Ecology</span> <span
style="font-weight: bold;">18</span>: 1175-1186.<br>
@@ -147,6 +170,7 @@
[5] Cohas E, Bonenfant C, Kempaners B, Allainé D (2009).
Age-specific effect of heterozygosity on survival in alpine
marmots, <span class="i"><span style="font-style: italic;">Marmota
+
marmota</span>.</span><span style="font-style: italic;">
Molecular Ecology</span> <span style="font-weight: bold;">18</span>:
@@ -188,7 +212,8 @@
[11] Jennifer Paul, Nicole Vachon,
Colin J. Garroway and Joanna R. Freeland
(2010) Molecular data provide strong evidence of natural
- hybridization between native and introduced lineages of <i>Phragmites
+ hybridization between native and introduced lineages of <i>Phragmites
+
australis</i> in North America. <span style="font-style:
italic;">Biological Invasions</span>. doi:
10.1007/s10530-010-9699-6.<br>
@@ -285,23 +310,19 @@
</span><span class="authors"><span style="white-space:
nowrap;">[20] Denis Laloë</span>, <span
style="white-space: nowrap;">Katayoun Moazami-Goudarzi</span>,
- <span style="white-space: nowrap;">Johannes
- A. Lenstra</span>, <span style="white-space: nowrap;">Paolo
- Ajmone Marsan</span>, <span style="white-space: nowrap;">Pedro
-
- Azor</span>, <span style="white-space: nowrap;">Roswitha
- Baumung</span>, <span style="white-space: nowrap;">Daniel
- G. Bradley</span>, <span style="white-space: nowrap;">Michael
-
- W. Bruford</span>, <span style="white-space: nowrap;">Javier
-
- Cañón</span>, <span style="white-space:
- nowrap;">Gaudenz Dolf</span>, <span style="white-space:
- nowrap;">Susana Dunner</span>, <span style="white-space:
- nowrap;">Georg Erhardt</span>, <span style="white-space:
- nowrap;">Godfrey Hewitt</span>, <span style="white-space:
- nowrap;">Juha Kantanen</span>, <span style="white-space:
- nowrap;">Gabriela Obexer-Ruff</span>, <span
+ <span style="white-space: nowrap;">Johannes A. Lenstra</span>,
+ <span style="white-space: nowrap;">Paolo Ajmone Marsan</span>,
+ <span style="white-space: nowrap;">Pedro Azor</span>, <span
+ style="white-space: nowrap;">Roswitha Baumung</span>, <span
+ style="white-space: nowrap;">Daniel G. Bradley</span>, <span
+ style="white-space: nowrap;">Michael W. Bruford</span>, <span
+ style="white-space: nowrap;">Javier Cañón</span>,
+ <span style="white-space: nowrap;">Gaudenz Dolf</span>, <span
+ style="white-space: nowrap;">Susana Dunner</span>, <span
+ style="white-space: nowrap;">Georg Erhardt</span>, <span
+ style="white-space: nowrap;">Godfrey Hewitt</span>, <span
+ style="white-space: nowrap;">Juha Kantanen</span>, <span
+ style="white-space: nowrap;">Gabriela Obexer-Ruff</span>, <span
style="white-space: nowrap;">Ingrid Olsaker</span>, <span
style="white-space: nowrap;">Clemen Rodellar</span>, <span
style="white-space: nowrap;">Alessio Valentini</span>, <span
@@ -337,12 +358,14 @@
cosmopolitan maternal heritage of the Thoroughbred racehorse
breed shows a significant contribution from British and Irish
native mares. <a style="font-style: italic;" title="Biology
- letters.">Biol Lett.</a><span style="font-style: italic;"> </span>2010
+ letters.">Biol Lett.</a><span style="font-style: italic;"> </span>2010
+
Oct 6. [Epub ahead of print]<br>
</p>
<p class="auth_list">[24] SANTOS, H., BURBAN, C., ROUSSELET, J.,
ROSSI, J.-P., BRANCO, M. and KERDELHUÉ, C. , Incipient
allochronic speciation in the pine processionary moth (<em>Thaumetopoea
+
pityocampa</em>, Lepidoptera, Notodontidae). <span
style="font-style: italic;">Journal of Evolutionary Biology</span>,
@@ -353,9 +376,11 @@
Piccinetti, FaustoTinti (2010) Fishery genetics of
mediterranean bluefin tuna: review of existing data, on-going
studies and perspectives. <span style="font-style: italic;">Collect.
+
Vol. Sci. Pap. ICCAT</span>, 65(3): 988-995</p>
<p class="intro">[26] <span class="citation_author">Vandewoestijne
+
S, </span> <span class="citation_author">Van Dyck H, </span>
<span class="citation_date">2010</span> <span
@@ -363,6 +388,7 @@
Differences along a Latitudinal Cline between Original and
Recently Colonized Habitat in a Butterfly. </span> <span
style="font-style: italic;" class="citation_journal_title">PLoS
+
ONE</span><span class="citation_issue"> 5(11):</span> <span
class="citation_start_page">e13810.</span> <span
@@ -379,7 +405,8 @@
Venkat S. Malladi and David Glenn Smith.(2011) The effect of
SNP discovery method and sample size on estimation of
population genetic data for Chinese and Indian rhesus macaques
- (<i>Macaca mulatta</i>). <span style="font-style: italic;">Primates:
+ (<i>Macaca mulatta</i>). <span style="font-style: italic;">Primates:
+
</span><span class="doi"><span class="label">DOI:</span> <span
class="value">10.1007/s10329-010-0232-4<br>
</span></span></p>
@@ -433,7 +460,8 @@
<p class="intro">[35] HORNE, J. B., MOMIGLIANO, P., WELCH, D.
J., NEWMAN, S. J. and Van HERWERDEN, L. (2011), Limited
ecological population connectivity suggests low demands on
- self-recruitment in a tropical inshore marine fish (<em>Eleutheronema
+ self-recruitment in a tropical inshore marine fish (<em>Eleutheronema
+
tetradactylum</em>: Polynemidae). Molecular Ecology,
20: no. doi: 10.1111/j.1365-294X.2011.05097.x<br>
</p>
@@ -445,6 +473,7 @@
class="citation_author">et al. </span> <span
class="citation_date">2011</span> <span
class="citation_article_title">Low Diversity <i>Cryptococcus
+
neoformans</i> Variety <i>grubii</i> Multilocus Sequence
Types from Thailand Are Consistent with an Ancestral African
@@ -463,7 +492,8 @@
<p class="intro">[38] A. Mercier, D. Ajzenberg, S.<span
class="hit"> Devillard</span>, M.P. Demar, B. de Thoisy, H.
Bonnabau, F. Collinet, R. Boukhari, D. Blanchet, S. Simon, B.
- Carme, M.-L. Dardé (<span style="font-style: italic;">in
+ Carme, M.-L. Dardé (<span style="font-style: italic;">in
+
press</span>) Human impact on genetic diversity of <span
style="font-style: italic;">Toxoplasma gondii</span>:
Example of the anthropized environment from French Guiana. <br>
@@ -484,7 +514,8 @@
<p class="intro">[41] Šingliarová, Barbora ; Chrtek,
Jindřich ; Plačková, Ivana ;Mráz, Patrik (2001)
Allozyme Variation in Diploid, Polyploid and Mixed-Ploidy
- Populations of the <span style="font-style: italic;">Pilosella
+ Populations of the <span style="font-style: italic;">Pilosella
+
alpicola</span> Group (Asteraceae): Relation to Morphology,
Origin of Polyploids and Breeding System . Folia Geobotanica:
1-24. Doi: 10.1007/s12224-011-9102-0<br>
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