[adegenet-commits] r941 - pkg www www/files

[noreply at r-forge.r-project.org]

Author: jombart
Date: 2011-07-05 12:49:05 +0200 (Tue, 05 Jul 2011)
New Revision: 941

Added:
   www/files/adegenet_1.3-0.tgz
Modified:
   pkg/ChangeLog
   www/download.html
Log:
added binaries for mac 1.3-0
Getting 1.3-1 ready - passes the check, way lighter.


Modified: pkg/ChangeLog
===================================================================
--- pkg/ChangeLog	2011-07-04 20:58:07 UTC (rev 940)
+++ pkg/ChangeLog	2011-07-05 10:49:05 UTC (rev 941)
@@ -1,3 +1,25 @@
+			CHANGES IN ADEGENET VERSION 1.3-1
+
+
+
+BUG FIXES
+
+	o removed all dependency with graph package, which was still
+	causing errors on some systems - whenever Bioconductor was not by
+	default one of the accessible repositories (used to be FAQ #4).
+
+NEW FEATURES
+
+	o legend in scatter.dapc now matches to the type and size of
+	symbols used in the plot.
+
+	o the package has been made smaller (from 20MB to 8.5MB).
+
+	o a warning has been added to read.structure: the function is made
+	for diploid data only.
+
+
+
 			CHANGES IN ADEGENET VERSION 1.3-0
 
 

Modified: www/download.html
===================================================================
--- www/download.html	2011-07-04 20:58:07 UTC (rev 940)
+++ www/download.html	2011-07-05 10:49:05 UTC (rev 941)
@@ -34,7 +34,7 @@
 (adegenet_1.3-0)
 is available as:<br>
 - <a href="files/adegenet_1.3-0.tar.gz">linux/unix sources</a><br>
-- MacOS X binary<br>
+- <a href="files/adegenet_1.3-0.tgz">MacOS X binary</a><br>
 - <a href="files/adegenet_1.3-0.zip">Windows binary<br>
 </a><br>
 <img alt="" src="images/bullet.png" style="width: 10px; height: 10px;">
@@ -68,7 +68,8 @@
 lower)
 fixes
 a
-an issue occuring when trying to
+an
+issue occuring when trying to
 compute frequences in data consisting in a single monomorphic locus.<br>
 <a href="files/patches/export.R"><span style="font-family: monospace;">export.R</span></a>:
 (for
@@ -77,7 +78,8 @@
 lower)
 fixes
 issues
-in data conversion from adegenet
+in
+data conversion from adegenet
 to hierfstat
 (genind2hierfstat); also fixes <span style="font-family: monospace;">fstat</span>
 function.<br>
@@ -88,9 +90,10 @@
 lower)
 implements
 new
-plotting options for dapc scatterplots<span
- style="font-family: monospace;"> (scatter</span> on <span
- style="font-family: monospace;">dapc</span> objects).<br>
+plotting
+options for dapc scatterplots<span style="font-family: monospace;">
+(scatter</span> on <span style="font-family: monospace;">dapc</span>
+objects).<br>
 <a href="files/patches/auxil.R"><span style="font-family: monospace;">auxil.R</span></a>:
 (for
 adegenet_1.2-8
@@ -98,7 +101,8 @@
 lower)
 implements
 useful
-auxiliary functions for plotting data such as <span
+auxiliary
+functions for plotting data such as <span
  style="font-family: monospace;">transp</span> or <span
  style="font-family: monospace;">num2col</span>.<br>
 <br>

Added: www/files/adegenet_1.3-0.tgz
===================================================================
(Binary files differ)


Property changes on: www/files/adegenet_1.3-0.tgz
___________________________________________________________________
Added: svn:mime-type
   + application/octet-stream