[adegenet-commits] r631 - pkg/inst/files

[noreply at r-forge.r-project.org]

Author: jombart
Date: 2010-05-18 11:55:09 +0200 (Tue, 18 May 2010)
New Revision: 631

Added:
   pkg/inst/files/pdH1N1-HA.fasta
   pkg/inst/files/pdH1N1-NA.fasta
   pkg/inst/files/pdH1N1-data.csv
Log:
pdH1N1 data files (forgot to commit these...)


Added: pkg/inst/files/pdH1N1-HA.fasta
===================================================================
--- pkg/inst/files/pdH1N1-HA.fasta	                        (rev 0)
+++ pkg/inst/files/pdH1N1-HA.fasta	2010-05-18 09:55:09 UTC (rev 631)
@@ -0,0 +1,12557 @@
+> GQ243757
+caatactagt agttctgcta tatacatttg caaccgcaaa tgcagacaca ttatgtatag
+gttatcatgc gaacaattca acagacactg tagacacagt actagaaaag aatgtaacag
+taacacactc tgttaacctt ctagaagaca agcataacgg gaaactatgc aaactaagag
+gggtagcccc attgcatttg ggtaaatgta acattgctgg ctggatcctg ggaaatccag
+agtgtgaatc actctccaca gcaagctcat ggtcctacat tgtggaaaca tctagttcag
+acaatggaac gtgttaccca ggagatttca tcgattatga ggagctaaga gagcaattga
+gctcagtgtc atcatttgaa aggtttgaga tattccccaa gacaagttca tggcccaatc
+atgactcgaa caaaggtgta acggcagcat gtcctcatgc tggagcaaaa agcttctaca
+aaaatttaat atggctagtt aaaaaaggaa attcataccc aaagctcagc aaatcctaca
+ttaatgataa agggaaagaa gtcctcgtgc tatggggcat tcaccatcca tctactagtg
+ctgaccaaca aagtctctat cagaatgcag atgcatatgt ttttgtgggg acatcaaaat
+acagcaagaa gttcaagccg gaaatagcaa taagacccaa agtgagggat caagaaggga
+gaatgaacta ttactggaca ctagtagagc cgggagacaa aataacattc gaagcaactg
+gaaatctagt ggtaccgaga tatgcattcg caatggaaag aaatgctgga tctggtatta
+tcatttcaga tacaccagtc cacgattgca atacaacttg tcagacaccc aagggtgcta
+taaacaccag cctcccattt cagaatatac atccgatcac aattggaaaa tgtccaaaat
+atgtaaaaag cacaaaattg agactggcca caggattgag gaatgtcccg tctattcaat
+ctagaggcct atttggggcc attgccggtt tcattgaagg ggggtggaca gggatggtag
+atggatggta cggttatcac catcaaaatg agcaggggtc aggatatgca gccgacctga
+agagcacaca gaatgccatt gacgagatta ctaacaaagt aaattctgtt attgaaaaga
+tgaatacaca gttcacagca gtaggtaaag agttcaacca cctggaaaaa agaatagaga
+atttaaataa aaaaattgat gatggtttcc tggacatttg gacttacaat gccgaactgt
+tggttctatt ggaaaatgaa agaactttgg actaccacga ttcaaatgtg aagaacttat
+atgaaaaggt aagaagccag ttaaaaaaca atgccaagga aattggaaac ggctgctttg
+aattttacca caaatgcgat aacacgtgca tggaaagtgt caaaaatggg acttatgact
+acccaaaata ctcagaggaa gcaaaattaa acagagaaga aatagatggg gtaaagctgg
+aatcaacaag gatttaccag attttggcga tctattcaac tgtcgccagt tcattggtac
+tggtagtctc cctgggggca atcagtttct ggatgtgctc taatgggtct ct
+> GQ160611
+caatactagt agttctgcta tatacatttg caaccgcaaa tgcagacaca ttatgtatag
+gttatcatgc gaacaattca acagacactg tagacacagt actagaaaag aatgtaacag
+taacacactc tgttaacctt ctagaagaca agcataacgg gaaactatgc aaactaagag
+gggtagcccc attgcatttg ggtaaatgta acattgctgg ctggatcctg ggaaatccag
+agtgtgaatc actctccaca gcaagctcat ggtcctacat tgtggaaaca tctagttcag
+acaatggaac gtgttaccca ggagatttca tcgattatga ggagctaaga gagcaattga
+gctcagtgtc atcatttgaa aggtttgaga tattccccaa gacaagttca tggcccaatc
+atgactcgaa caaaggtgta acggcagcat gtcctcatgc tggagcaaaa agcttctaca
+aaaatttaat atggctagtt aaaaaaggaa attcataccc aaagctcagc aaatcctaca
+ttaatgataa agggaaagaa gtcctcgtgc tatggggcat tcaccatcca tctactagtg
+ctgaccaaca aagtctctat cagaatgcag atgcatatgt ttttgtgggg acatcaagat
+acagcaagaa gttcaagccg gaaatagcaa taagacccaa agtgagggat caagaaggga
+gaatgaacta ttactggaca ctagtagagc cgggagacaa aataacattc gaagcaactg
+gaaatctagt ggtaccgaga tatgcattcg caatggaaag aaatgctgga tctggtatta
+tcatttcaga tacaccagtc cacgattgca atacaacttg tcagacaccc aagggtgcta
+taaacaccag cctcccattt cagaatatac atccgatcac aattggaaaa tgtccaaaat
+atgtaaaaag cacaaaattg agactggcca caggattgag gaatgtcccg tctattcaat
+ctagaggcct atttggggcc attgccggtt tcattgaagg ggggtggaca gggatggtag
+atggatggta cggttatcac catcaaaatg agcaggggtc aggatatgca gccgacctga
+agagcacaca gaatgccatt gacgagatta ctaacaaagt aaattctgtt attgaaaaga
+tgaatacaca gttcacagca gtaggtaaag agttcaacca cctggaaaaa agaatagaga
+atttaaataa aaaaattgat gatggtttcc tggacatttg gacttacaat gccgaactgt
+tggttctatt ggaaaatgaa agaactttgg actaccacga ttcaaatgtg aagaacttat
+atgaaaaggt aagaagccag ttaaaaaaca atgccaagga aattggaaac ggctgctttg
+aattttacca caaatgcgat aacacgtgca tggaaagtgt caaaaatggg acttatgact
+acccaaaata ctcagaggaa gcaaaattaa acagagaaga aatagatggg gtaaagctgg
+aatcaacaag gatttaccag attttggcga tctattcaac tgtcgccagt tcattggtac
+tggtagtctc cctgggggca atcagtttct ggatgtgctc taatgggtct ct
+> GQ243751
+caatactagt agttctgcta tatacatttg caaccgcaaa tgcagacaca ttatgtatag
+gttatcatgc gaacaattca acagacactg tagacacagt actagaaaag aatgtaacag
+taacacactc tgttaacctt ctagaagaca agcataacgg gaaactatgc aaactaagag
+gggtagcccc attgcatttg ggtaaatgta acattgctgg ctggatcctg ggaaatccag
+agtgtgaatc actctccaca gcaagctcat ggtcctacat tgtggaaaca tctagttcag
+acaatggaac gtgttaccca ggagatttca tcgattatga ggagctaaga gagcaattga
+gctcagtgtc atcatttgaa aggtttgaga tattccccaa gacaagttca tggcccaatc
+atgactcgaa caaaggtgta acggcagcat gtcctcatgc tggagcaaaa agcttctaca
+aaaatttaat atggctagtt aaaaaaggaa attcataccc aaagctcagc aaatcctaca
+ttaatgataa agggaaagaa gtcctcgtgc tatggggcat tcaccatcca tctactagtg
+ctgaccaaca aagtctctat cagaatgcag atgcatatgt ttttgtgggg acatcaaaat
+acagcaagaa gttcaagccg gaaatagcaa taagacccaa agtgagggat caagaaggga
+gaatgaacta ttactggaca ctagtagagc cgggagacaa aataacattc gaagcaactg
+gaaatctagt ggtaccgaga tatgcattcg caatggaaag aaatgctgga tctggtatta
+tcatttcaga tacaccagtc cacgattgca atacaacttg tcagacaccc aagggtgcta
+taaacaccag cctcccattt cagaatatac atccgatcac aattggaaaa tgtccaaaat
+atgtaaaaag cacaaaattg agactggcca caggattgag gaatgtcccg tctattcaat
+ctagaggcct atttggggcc attgccggtt tcattgaagg ggggtggaca gggatggtag
+atggatggta cggttatcac catcaaaatg agcaggggtc aggatatgca gccgacctga
+agagcacaca gaatgccatt gacgagatta ctaacaaagt aaattctgtt attgaaaaga
+tgaatacaca gttcacagca gtaggtaaag agttcaacca cctggaaaaa agaatagaga
+atttaaataa aaaaattgat gatggtttcc tggacatttg gacttacaat gccgaactgt
+tggttctatt ggaaaatgaa agaactttgg actaccacga ttcaaatgtg aagaacttat
+atgaaaaggt aagaagccag ttaaaaaaca atgccaagga aattggaaac ggctgctttg
+aattttacca caaatgcgat aacacgtgca tggaaagtgt caaaaatggg acttatgact
+acccaaaata ctcagaggaa gcaaaattaa acagagaaga aatagatggg gtaaagctgg
+aatcaacaag gatttaccag attttggcga tctattcaac tgtcgccagt tcattggtac
+tggtagtctc cctgggggca atcagtttct ggatgtgctc taatgggtct ct
+> GQ243761
+caatactagt agttctgcta tatacatttg caaccgcaaa tgcagacaca ttatgtatag
+gttatcatgc gaacaattca acagacactg tagacacagt actagaaaag aatgtaacag
+taacacactc tgttaacctt ctagaagaca agcataacgg gaaactatgc aaactaagag
+gggtagcccc attgcatttg ggtaaatgta acattgctgg ctggatcctg ggaaatccag
+agtgtgaatc actctccaca gcaagctcat ggtcctacat tgtggaaaca tctagttcag
+acaatggaac gtgttaccca ggagatttca tcgattatga ggagctaaga gagcaattga
+gctcagtgtc atcatttgaa aggtttgaga tattccccaa gacaagttca tggcccaatc
+atgactcgaa caaaggtgta acggcagcat gtcctcatgc tggagcaaaa agcttctaca
+aaaatttaat atggctagtt aaaaaaggaa attcataccc aaagctcagc aaatcctaca
+ttaatgataa agggaaagaa gtcctcgtgc tatggggcat tcaccatcca tctactagtg
+ctgaccaaca aagtctctat cagaatgcag atgcatatgt ttttgtgggg acatcaagat
+acagcaagaa gttcaagccg gaaatagcaa taagacccaa agtgagggat caagaaggga
+gaatgaacta ttactggaca ctagtagagc cgggagacaa aataacattc gaagcaactg
+gaaatctagt ggtaccgaga tatgcattcg caatggaaag aaatgctgga tctggtatta
+tcatttcaga tacaccagtc cacgattgca atacaacttg tcagacaccc aagggtgcta
+taaacaccag cctcccattt cagaatatac atccgatcac aattggaaaa tgtccaaaat
+atgtaaaaag cacaaaattg agactggcca caggattgag gaatgtcccg tctattcaat
+ctagaggcct atttggggcc attgccggtt tcattgaagg ggggtggaca gggatggtag
+atggatggta cggttatcac catcaaaatg agcaggggtc aggatatgca gccgacctga
+agagcacaca gaatgccatt gacgagatta ctaacaaagt aaattctgtt attgaaaaga
+tgaatacaca gttcacagca gtaggtaaag agttcaacca cctggaaaaa agaatagaga
+atttaaataa aaaagttgat gatggtttcc tggacatttg gacttacaat gccgaactgt
+tggttctatt ggaaaatgaa agaactttgg actaccacga ttcaaatgtg aagaacttat
+atgaaaaggt aagaagccag ttaaaaaaca atgccaagga aattggaaac ggctgctttg
+aattttacca caaatgcgat aacacgtgca tggaaagtgt caaaaatggg acttatgact
+acccaaaata ctcagaggaa gcaaaattaa acagagaaga aatagatggg gtaaagctgg
+aatcaacaag gatttaccag attttggcga tctattcaac tgtcgccagt tcattggtac
+tggtagtctc cctgggggca atcagtttct ggatgtgctc taatgggtct ct
+> GQ243755
+caatactagt agttctgcta tatacatttg caaccgcaaa tgcagacaca ttatgtatag
+gttatcatgc gaacaattca acagacactg tagacacagt actagaaaag aatgtaacag
+taacacactc tgttaacctt ctagaagaca agcataacgg gaaactatgc aaactaagag
+gggtagcccc attgcatttg ggtaaatgta acattgctgg ctggatcctg ggaaatccag
+agtgtgaatc actctccaca gcaagctcat ggtcctacat tgtggaaaca tctagttcag
+acaatggaac gtgttaccca ggagatttca tcgattatga ggagctaaga gagcaattga
+gctcagtgtc atcatttgaa aggtttgaga tattccccaa gacaagttca tggcccaatc
+atgacacgaa caaaggtgta acggcagcat gtcctcatgc tggagcaaaa agcttctaca
+aaaatttaat atggctagtt aaaaaaggaa attcataccc aaagctcagc aaatcctaca
+ttaatgataa agggaaagaa gtcctcgtgc tatggggcat tcaccatcca tctactagtg
+ctgaccaaca aagtctctat cagaatgcag atgcatatgt ttttgtgggg tcatcaagat
+acagcaagaa gttcaagccg gaaatagcaa taagacccaa agtgagggat caagaaggga
+gaatgaacta ttactggaca ctagtagagc cgggagacaa aataacattc gaagcaactg
+gaaatctagt ggtaccgaga tatgcattcg caatggaaag aaatgctgga tctggtatta
+tcatttcaga tacaccagtc cacgattgca atacaacttg tcagacaccc aagggtgcta
+taaacaccag cctcccattt cagaatatac atccgatcac aattggaaaa tgtccaaaat
+atgtaaaaag cacaaaattg agactggcca caggattgag gaatgtcccg tctattcaat
+ctagaggcct atttggggcc attgccggtt tcattgaagg ggggtggaca gggatggtag
+atggatggta cggttatcac catcaaaatg agcaggggtc aggatatgca gccgacctga
+agagcacaca gaatgccatt gacgagatta ctaacaaagt aaattctgtt attgaaaaga
+tgaatacaca gttcacagca gtaggtaaag agttcaacca cctggaaaaa agaatagaga
+atttaaataa aaaagttgat gatggtttcc tggacatttg gacttacaat gccgaactgt
+tggttctatt ggaaaatgaa agaactttgg actaccacga ttcaaatgtg aagaacttat
+atgaaaaggt aagaagccag ctaaaaaaca atgccaagga aattggaaac ggctgctttg
+aattttacca caaatgcgat aacacgtgca tggaaagtgt caaaaatggg acttatgact
+acccaaaata ctcagaggaa gcaaaattaa acagagaaga aatagatggg gtaaagctgg
+aatcaacaag gatttaccag attttggcga tctattcaac tgtcgccagt tcattggtac
+tggtagtctc cctgggggca atcagtttct ggatgtgctc taatgggtct ct
+> GQ247724
+caatactagt agttctgcta tatacatttg caaccgcaaa tgcagacaca ttatgtatag
+gttatcatgc gaacaattca acagacactg tagacacagt actagaaaag aatgtaacag
+taacacactc tgttaacctt ctagaagaca agcataacgg gaaactatgc aaactaagag
+gggtagcccc attgcatttg ggtaaatgta acattgctgg ctggatcctg ggaaatccag
+agtgtgaatc actctccaca gcaagctcat ggtcctacat tgtggaaaca tctagttcag
+acaatggaac gtgttaccca ggagatttca tcgattatga ggagctaaga gagcaattga
+gctcagtgtc atcatttgaa aggtttgaga tattccccaa gacaagttca tggcccaatc
+atgactcgaa caaaggtgta acggcagcat gtcctcatgc tggagcaaaa agcttctaca
+aaaatttaat atggctagtt aaaaaaggaa attcataccc aaagctcagc aaatcctaca
+ttaatgataa agggaaagaa gtcctcgtgc tatggggcat tcaccatcca tctactagtg
+ctgaccaaca aagtctctat cagaatgcag atgcatatgt ttttgtgggg tcatcaagat
+acagcaagaa gttcaagccg gaaatagcaa taagacccaa agtgagggat caagaaggga
+gaatgaacta ttactggaca ctagtagagc cgggagacaa aataacattc gaagcaactg
+gaaatctagt ggtaccgaga tatgcattcg caatggaaag aaatgctgga tctggtatta
+tcatttcaga tacaccagtc cacgattgca atacaacttg tcagacaccc aagggtgcta
+taaacaccag cctcccattt cagaatatac atccgatcac aattggaaaa tgtccaaaat
+atgtaaaaag cacaaaattg agactggcca caggattgag gaatgtcccg tctattcaat
+ctagaggcct atttggggcc attgccggtt tcattgaagg ggggtggaca gggatggtag
+atggatggta cggttatcac catcaaaatg agcaggggtc aggatatgca gccgacctga
+agagcacaca gaatgccatt gacgagatta ctaacaaagt aaattctgtt attgaaaaga
+tgaatacaca gttcacagca gtaggtaaag agttcaacca cctggaaaaa agaatagaga
+atttaaataa aaaagttgat gatggtttcc tggacatttg gacttacaat gccgaactgt
+tggttctatt ggaaaatgaa agaactttgg actaccacga ttcaaatgtg aagaacttat
+atgaaaaggt aagaagccag ttaaaaaaca atgccaagga aattggaaac ggctgctttg
+aattttacca caaatgcgat aacacgtgca tggaaagtgt caaaaatggg acttatgact
+acccaaaata ctcagaggaa gcaaaattaa acagagaaga aatagatggg gtaaagctgg
+aatcaacaag gatttaccag attttggcga tctattcaac tgtcgccagt tcattggtac
+tggtagtctc cctgggggca atcagtttct ggatgtgctc taatgggtct ct
+> GQ356787
+caatactagt agttctgcta tatacatttg caaccgcaaa tgcagacaca ttatgtatag
+gttatcatgc gaacaattca acagacactg tagacacagt actagaaaag aatgtaacag
+taacacactc tgttaacctt ctagaagaca agcataacgg gaaactatgc aaactaagag
+gggtagcccc attgcatttg ggtaaatgta acattgctgg ctggatcctg ggaaatccag
+agtgtgaatc actctccaca gcaagctcat ggtcctacat tgtggaaaca tctagttcag
+acaatggaac gtgttaccca ggagatttca tcgattatga ggagctaaga gagcaattga
+gctcagtgtc atcatttgaa aggtttgaga tattccccaa gacaagttca tggcccaatc
+atgactcgaa caaaggtgta acggcagcat gtcctcatgc tggagcaaaa agcttctaca
+aaaatttaat atggctagtt aaaaaaggaa attcataccc aaagctcagc aaatcctaca
+ttaatgataa agggaaagaa gtcctcgtgc tatggggcat tcaccatcca tctactagtg
+ctgaccaaca aagtctctat cagaatgcag atgcatatgt ttttgtgggg tcatcaagat
+acagcaagaa gttcaagccg gaaatagcaa taagacccaa agtgagggat caagaaggga
+gaatgaacta ttactggaca ctagtagagc cgggagacaa aataacattc gaagcaactg
+gaaatctagt ggtaccgaga tatgcattcg caatggaaag aaatgctgga tctggtatta
+tcatttcaga tacaccagtc cacgattgca atacaacttg tcagacaccc aagggtgcta
+taaacaccag cctcccattt cagaatatac atccgatcac aattggaaaa tgtccaaaat
+atgtaaaaag cacaaaattg agactggcca caggattgag gaatgtcccg tctattcaat
+ctagaggcct atttggggcc attgccggtt tcattgaagg ggggtggaca gggatggtag
+atggatggta cggttatcac catcaaaatg agcaggggtc aggatatgca gccgacctga
+agagcacaca gaatgccatt gacgagatta ctaacaaagt aaattctgtt attgaaaaga
+tgaatacaca gttcacagca gtaggtaaag agttcaacca cctggaaaaa agaatagaga
+atttaaataa aaaagttgat gatggtttcc tggacatttg gacttacaat gccgaactgt
+tggttctatt ggaaaatgaa agaactttgg actaccacga ttcaaatgtg aagaacttat
+atgaaaaggt aagaaaccag ttaaaaaaca atgccaagga aattggaaac ggctgctttg
+aattttacca caaatgcgat aacacgtgca tggaaagtgt caaaaatggg acttatgact
+acccaaaata ctcagaggaa gcaaaattaa acagagaaga aatagatggg gtaaagctgg
+aatcaacaag gatttaccag attttggcga tctattcaac tgtcgccagt tcattggtac
+tggtagtctc cctgggggca atcagtttct ggatgtgctc taatgggtct ct
+> GQ368667
+caatactagt agttctgcta tatacatttg caaccgcaaa tgcagacaca ttatgtatag
+gttatcatgc gaacaattca acagacactg tagacacagt actagaaaag aatgtaacag
+taacacactc tgttaacctt ctagaagaca agcataacgg gaaactatgc aaactaagag
+gggtagcccc attgcatttg ggtaaatgta acattgctgg ctggatcctg ggaaatccag
+agtgtgaatc actctccaca gcaagctcat ggtcctacat tgtggaaaca tctagttcag
+acaatggaac gtgttaccca ggagatttca tcgattatga ggagctaaga gagcaattga
+gctcagtgtc atcatttgaa aggtttgaga tattccccaa gacaagttca tggcccaatc
+atgactcgaa caaaggtgta acggcagcat gtcctcatgc tggagcaaaa agcttctaca
+aaaatttaat atggctagtt aaaaaaggaa attcataccc aaagctcagc aaatcctaca
+ttaatgataa agggaaagaa gtcctcgtgc tatggggcat tcaccatcca tctactagtg
+ctgaccaaca aagtctctat cagaatgcag atgcatatgt ttttgtgggg acatcaagat
+acagcaagaa gttcaagccg gaaatagcaa taagacccaa agtgagggat caagaaggga
+gaatgaacta ttactggaca ctagtagagc cgggagacaa aataacattc gaagcaactg
+gaaatctagt ggtaccgaga tatgcattcg caatggaaag aaatgctgga tctggtatta
+tcatttcaga tacaccagtc cacgattgca atacaacttg tcagacaccc aagggtgcta
+taaacaccag cctcccattt cagaatatac atccgatcac aattggaaaa tgtccaaaat
+atgtaaaaag cacaaaattg agactggcca caggattgag gaatgtcccg tctattcaat
+ctagaggcct atttggggcc attgccggtt tcattgaagg ggggtggaca gggatggtag
+atggatggta cggttatcac catcaaaatg agcaggggtc aggatatgca gccgacctga
+agagcacaca gaatgccatt gacgagatta ctaacaaagt aaattctgtt attgaaaaga
+tgaatacaca gttcacagca gtaggtaaag agttcaacca cctggaaaaa agaatagaga
+atttaaataa aaaagttgat gatggtttcc tggacatttg gacttacaat gccgaactgt
+tggttctatt ggaaaatgaa agaactttgg actaccacga ttcaaatgtg aagaacttat
+atgaaaaggt aagaagccag ttaaaaaaca atgccaagga aattggaaac ggctgctttg
+aattttacca caaatgcgat aacacgtgca tggaaagtgt caaaaatggg acttatgact
+acccaaaata ctcagaggaa gcaaaattaa acagagaaga aatagatggg gtaaagctgg
+aatcaacaag gatttaccag attttggcga tctattcaac tgtcgccagt tcattggtac
+tggtagtctc cctgggggca atcagtttct ggatgtgctc taatgggtct ct
+> GQ368665
+caatactagt agttctgcta tatacatttg caaccgcaaa tgcagacaca ttatgtatag
+gttatcatgc gaacaattca acagacactg tagacacagt actagaaaag aatgtaacag
+taacacactc tgttaacctt ctagaagaca agcataacgg gaaactatgc aaactaagag
+gggtagcccc attgcatttg ggtaaatgta acattgctgg ctggatcctg ggaaatccag
+agtgtgaatc actctccaca gcaagctcat ggtcctacat tgtggaaaca tctagttcag
+acaatggaac gtgttaccca ggagatttca tcgattatga ggagctaaga gagcaattga
+gctcagtgtc atcatttgaa aggtttgaga tattccccaa gacaagttca tggcccaatc
+atgactcgaa caaaggtgta acggcagcat gtcctcatgc tggagcaaaa agcttctaca
+aaaatttaat atggctagtt aaaaaaggaa attcataccc aaagctcagc aaatcctaca
+ttaatgataa agggaaagaa gtcctcgtgc tatggggcat tcaccatcca tctactagtg
+ctgaccaaca aagtctctat cagaatgcag atgcatatgt ttttgtgggg acatcaagat
+acagcaagaa gttcaagccg gaaatagcaa taagacccaa agtgagggat caagaaggga
+gaatgaacta ttactggaca ctagtagagc cgggagacaa aataacattc gaagcaactg
+gaaatctagt ggtaccgaga tatgcattcg caatggaaag aaatgctgga tctggtatta
+tcatttcaga tacaccagtc cacgattgca atacaacttg tcagacaccc aagggtgcta
+taaacaccag cctcccattt cagaatatac atccgatcac aattggaaaa tgtccaaaat
+atgtaaaaag cacaaaattg agactggcca caggattgag gaatgtcccg tctattcaat
+ctagaggcct atttggggcc attgccggtt tcattgaagg ggggtggaca gggatggtag
+atggatggta cggttatcac catcaaaatg agcaggggtc aggatatgca gccgacctga
+agagcacaca gaatgccatt gacgagatta ctaacaaagt aaattctgtt attgaaaaga
+tgaatacaca gttcacagca gtaggtaaag agttcaacca cctggaaaaa agaatagaga
+atttaaataa aaaagttgat gatggtttcc tggacatttg gacttacaat gccgaactgt
+tggttctatt ggaaaatgaa agaactttgg actaccacga ttcaaatgtg aagaacttat
+atgaaaaggt aagaagccag ttaaaaaaca atgccaagga aattggaaac ggctgctttg
+aattttacca caaatgcgat aacacgtgca tggaaagtgt caaaaatggg acttatgact
+acccaaaata ctcagaggaa gcaaaattaa acagagaaga aatagatggg gtaaagcttg
+aatcaacaag gatttaccag attttggcga tctattcaac tgtcgccagt tcattggtac
+tggtagtctc cctgggggca atcagtttct ggatgtgctc taatgggtct ct
+> FJ998207
+caatactagt agttctgcta tatacatttg caaccgcaaa tgcagacaca ttatgtatag
+gttatcatgc gaacaattca acagacactg tagacacagt actagaaaag aatgtaacag
+taacacactc tgttaacctt ctagaagaca agcataacgg gaaactatgc aaactaagag
+gggtagcccc attgcatttg ggtaaatgta acattgctgg ctggatcctg ggaaatccag
+agtgtgaatc actctccaca gcaagctcat ggtcctacat tgtggaaaca tctagttcag
+acaatggaac gtgttaccca ggagatttca tcgattatga ggagctaaga gagcaattga
+gctcagtgtc atcatttgaa aggtttgaga tattccccaa gacaagttca tggcccaatc
+atgactcgaa caaaggtgta acggcagcat gtcctcatgc tggagcaaaa agcttctaca
+aaaatttaat atggctagtt aaaaaaggaa attcataccc aaagctcagc aaatcctaca
+ttaatgataa agggaaagaa gtcctcgtgc tatggggcat tcaccatcca tctactagtg
+ctgaccaaca aagtctctat cagaatgcag atgcatatgt ttttgtgggg tcatcaagat
+acagcaagaa gttcaagccg gaaatagcaa taagacccaa agtgagggat caagaaggga
+gaatgaacta ttactggaca ctagtagagc cgggagacaa aataacattc gaagcaactg
+gaaatctagt ggtaccgaga tatgcattcg caatggaaag aaatgctggg tctggtatta
+tcatttcaga tacaccagtc cacgattgca atacaacttg tcagacaccc aagggtgcta
+taaacaccag cctcccattt cagaatatac atccgatcac aattggaaaa tgtccaaaat
+atgtaaaaag cacaaaattg agactggcca caggattgag gaatgtcccg tctattcaat
+ctagaggcct atttggggcc attgccggtt tcattgaagg ggggtggaca gggatggtag
+atggatggta cggttatcac catcaaaatg agcaggggtc aggatatgca gccgacctga
+agagcacaca gaatgccatt gacgagatta ctaacaaagt aaattctgtt gttgaaaaga
+tgaatacaca gttcacagca gtaggtaaag agttcaacca cctggaaaaa agaatagaga
+atttaaataa aaaagttgat gatggtttcc tggacatttg gacttacaat gccgaactgt
+tggttctatt ggaaaatgaa agaactttgg actaccacga ttcaaatgtg aagaacttat
+atgaaaaggt aagaagccag ctaaaaaaca atgccaagga aattggaaac ggctgctttg
+aattttacca caaatgcgat aacacgtgca tggaaagtgt caaaaatggg acttatgact
+acccaaaata ctcagaggaa gcaaaattaa acagagaaga aatagatggg gtaaagctgg
+aatcaacaag gatttaccag attttggcga tctattcaac tgtcgccagt tcattggtac
+tggtagtctc cctgggggca atcagtttct ggatgtgctc taatgggtct ct
+> FJ998209
+caatactagt agttctgcta tatacatttg caaccgcaaa tgcagacaca ttatgtatag
+gttatcatgc gaacaattca acagacactg tagacacagt actagaaaag aatgtaacag
+taacacactc tgttaacctt ctagaagaca agcataacgg gaaactatgc aaactaagag
+gggtagcccc attgcatttg ggtaaatgta acattgctgg ctggatcctg ggaaatccag
+agtgtgaatc actctccaca gcaagctcat ggtcctacat tgtggaaaca tctagttcag
+acaatggaac gtgttaccca ggagatttca tcgattatga ggagctaaga gagcaattga
+gctcagtgtc atcatttgaa aggtttgaga tattccccaa gacaagttca tggcccaatc
+atgactcgaa caaaggtgta acggcagcat gtcctcatgc tggagcaaaa agcttctaca
+aaaatttaat atggctagtt aaaaaaggaa attcataccc aaagctcagc aaatcctaca
+ttaatgataa agggaaagaa gtcctcgtgc tatggggcat tcaccatcca tctactagtg
+ctgaccaaca aagtctctat cagaatgcag atgcatatgt ttttgtgggg acatcaagat
+acagcaagaa gttcaagccg gaaatagcaa taagacccaa agtgagggat caagaaggga
+gaatgaacta ttactggaca ctagtagagc cgggagacaa aataacattc gaagcaactg
+gaaatctagt ggtaccgaga tatgcattcg caatggaaag aaatgctgga tctggtatta
+tcatttcaga tacaccagtc cacgattgca atacaacttg tcagacaccc aagggtgcta
+taaacaccag cctcccattt cagaatatac atccgatcac aattggaaaa tgtccaaaat
+atgtaaaaag cacaaaattg agactggcca caggattgag gaatgtcccg tctattcaat
+ctagaggcct atttggggcc attgccggtt tcattgaagg ggggtggaca gggatggtag
+atggatggta cggttatcac catcaaaatg agcaggggtc aggatatgca gccgacctga
+agagcacaca gaatgccatt gacgagatta ctaacaaagt aaattctgtt attgaaaaga
+tgaatacaca gttcacagca gtaggtaaag agttcaacca cctggaaaaa agaatagaga
+atttaaataa aaaagttgat gatggtttcc tggacatttg gacttacaat gccgaactgt
+tggttctatt ggaaaatgaa agaactttgg actaccacga ttcaaatgtg aagaacttat
+atgaaaaggt aagaagccag ttaaaaaaca atgccaagga aattggaaac ggctgctttg
+aattttacca caaatgcgat aacacgtgca tggaaagtgt caaaaatggg acttatgact
+acccaaaata ctcagaggaa gcaaaattaa acagagaaga aatagatggg gtaaagctgg
+aatcaacaag gatttaccag attttggcga tctattcaac tgtcgccagt tcattggtac
+tggtagtctc cctgggggca atcagtttct ggatgtgctc taatgggtct ct
+> GQ465673
+caatactagt agttctgcta tatacatttg caaccgcaaa tgcagacaca ttatgtatag
+gttatcatgc gaacaattca acagacactg tagacacagt actagaaaag aatgtaacag
+taacacactc tgttaacctt ctagaagaca agcataacgg gaaactatgc aaactaagag
+gggtagcccc attgcatttg ggtaaatgta acattgctgg ctggatcctg ggaaatccag
+agtgtgaatc actctccaca gcaagctcat ggtcctacat tgtggaaaca tctagttcag
+acaatggaac gtgttaccca ggagatttca tcgattatga ggagctaaga gagcaattga
+gctcagtgtc atcatttgaa aggtttgaga tattccccaa gacaagttca tggcccaatc
+atgactcgaa caaaggtgta acggcagcat gttctcatgc tggagcaaaa agcttctaca
+aaaatttaat atggctagtt aaaaaaggaa attcataccc aaagctcagc aaatcctaca
+ttaatgataa agggaaagaa gtcctcgtgc tatggggcat tcaccatcca tctactagtg
+ctgaccaaca aagtctctat cagaatgcag atgcatatgt ttttgtgggg acatcaagat
+acagcaagaa gttcaagccg gaaatagcaa taagacccaa agtgagggat caagaaggga
+gaatgaacta ttactggaca ctagtagagc cgggagacaa aataacattc gaagcaactg
+gaaatctagt ggtaccgaga tatgcattcg caatggaaag aaatgctgga tctggtatta
+tcatttcaga tacaccagtc cacgattgca atacaacttg tcagacaccc aagggtgcta
+taaacaccag cctcccattt cagaatatac atccgatcac aattggaaaa tgtccaaaat
+atgtaaaaag cacaaaattg agactggcca caggattgag gaatgtcccg tctattcaat
+ctagaggcct atttggggcc attgccggtt tcattgaagg ggggtggaca gggatggtag
+atggatggta cggttatcac catcaaaatg agcaggggtc aggatatgca gccgacctga
+agagcacaca gaatgccatt gacgagatta ctaacaaagt aaattctgtt attgaaaaga
+tgaatacaca gttcacagca gtaggtaaag agttcaacca cctggaaaaa agaatagaga
+atttaaataa aaaagttgat gatggtttcc tggacatttg gacttacaat gccgaactgt
+tggttctatt ggaaaatgaa agaactttgg actaccacga ttcaaatgtg aagaacttat
+atgaaaaggt aagaagccag ttaaaaaaca atgccaagga aattggaaac ggctgctttg
+aattttacca caaatgcgat aacacgtgca tggaaagtgt caaaaatggg acttatgact
+acccaaaata ctcagaggaa gcaaaattaa acagagaaga aatagatggg gtaaagctgg
+aatcaacaag gatttaccag attttggcga tctattcaac tgtcgccagt tcattggtac
+tggtagtctc cctgggggca atcagtttct ggatgtgctc taatgggtct ct
+> GQ465679
+caatactagt aattatgcta tatacatttg caaccgcaaa tgcagacaca ttatgtatag
+gttatcatgc gaacaattca acagacactg tagacacagt actagaaaag aatgtaacag
+taacacactc tgttaacctt ctagaagaca agcataacgg gaaactatgc aaactaagag
+gggtagcccc attgcatttg ggtaaatgta acattgctgg ctggatcctg ggaaatccag
+agtgtgaatc actctccaca gcaagctcat ggtcctacat tgtggaaaca tctagttcag
+acaatggaac gtgttaccca ggagatttca tcgattatga ggagctaaga gagcaattga
+gctcagtgtc atcatttgaa aggtttgaga tattccccaa gacaagttca tggcccaatc
+atgactcgaa caaaggtgta acggcagcat gtcctcatgc tggagcaaaa agcttctaca
+aaaatttaat atggctagtt aaaaaaggaa attcataccc aaagctcagc aaatcctaca
+ttaatgataa agggaaagaa gtcctcgtgc tatggggcat tcaccatcca tctactagtg
+ctgaccaaca aagtctctat cagaatgcag atgcatatgt ttttgtgggg tcatcaagat
+acagcaagaa gttcaagccg gaaatagcaa taagacccaa agtgagggat caagaaggga
+gaatgaacta ttactggaca ctagtagagc cgggagacaa aataacattc gaagcaactg
+gaaatctagt ggtaccgaga tatgcattcg caatggaaag aaatgctgga tctggtatta
+tcatttcaga tacaccagtc cacgattgca atacaacttg tcagacaccc aagggtgcta
+taaacaccag cctcccattt cagaatatac atccgatcac aattggaaaa tgtccaaaat
+atgtaaaaag cacaaaattg agactggcca caggattgag gaatgtcccg tctattcaat
+ctagaggcct atttggggcc attgccggtt tcattgaagg ggggtggaca gggatggtag
+atggatggta cggttatcac catcaaaatg agcaggggtc aggatatgca gccgacctga
+agagcacaca gaatgccatt gacgagatta ctaacaaagt aaattctgtt attgaaaaga
+tgaatacaca gttcacagca gtaggtaaag agttcaacca cctggaaaaa agaatagaga
+atttaaataa aaaagttgat gatggtttcc tggacatttg gacttacaat gccgaactgt
+tggttctatt ggaaaatgaa agaactttgg actaccacga ttcaaatgtg aagaacttat
+atgaaaaggt aagaagccag ctaaaaaaca atgccaagga aattggaaac ggctgctttg
+aattttacca caaatgcgat aacacgtgca tggaaagtgt caaaaatggg acttatgact
+acccaaaata ctcagaggaa gcaaaattaa acagagaaga aatagatggg gtaaagctgg
+aatcaacaag gatttaccag attttggcga tctattcaac tgtcgccagt tcattggtac
+tggtagtctc cctgggggca atcagtttct ggatgtgctc taatgggtct ct
+> GQ402200
+caatactagt agttctgcta tatacatttg caaccgcaaa tgcagacaca ttatgtatag
+gttatcatgc gaacaattca acagacactg tagacacagt actagaaaag aatgtaacag
+taacacactc tgttaacctt ctagaagaca agcataacgg gaaactatgc aaactaagag
+gggtagcccc attgcatttg ggtaaatgta acattgctgg ctggatcctg ggaaatccag
+agtgtgaatc actctccaca gcaagctcat ggtcctacat tgtggaaaca tctagttcag
+acaatggaac gtgttaccca ggagatttca tcgattatga ggagctaaga gagcaattga
+gctcagtgtc atcatttgaa aggtttgaga tattccccaa gacaagttca tggcccaatc
+atgactcgaa caaaggtgta acggcagcat gtcctcatgc tggagcaaaa agcttctaca
+aaaatttaat atggctagtt aaaaaaggaa attcataccc aaagctcagc aaatcctaca
+ttaatgataa agggaaagaa gtcctcgtgc tatggggcat tcaccatcca tctactagtg
+ctgaccaaca aagtctctat cagaatgcag atgcatatgt ttttgtgggg tcatcaagat
+acagcaagaa gttcaagccg gaaatagcaa taagacccaa agtgagggat caagaaggga
+gaatgaacta ttactggaca ctagtagagc cgggagacaa aataacattc gaagcaactg
+gaaatctagt ggtaccgaga tatgcattcg caatggaaag aaatgctgga tctggtatta
+tcatttcaga tacaccagtc cacgattgca atacaacttg tcagacaccc aagggtgcta
+taaacaccag cctcccattt cakaatatac atccgatcac aattggaaaa tgtccaaaat
+atgtaaaaag cacaaaattg agactggcca caggattgag gaatrtcccg tctattcaat
+ctagaggcct atttggggcc attgccggtt tcattgaagg ggggtggaca gggatggtag
+atggatggta cggttatcac catcaaaatg agcaggggtc aggatatgca gccgacctga
+agagcacaca gaatgccatt gacgagatta ctaacaaagt aaattctgtt attgaaaaga
+tgaatacaca gttcacagca gtaggtaaag agttcaacca cctggaaaca agaatagaga
+atttaaataa aaaagttgat gatggtttcc tggacatttg gacttacaat gccgaactgt
+tggttctatt ggaaaatgaa agaactttgg actaccacga ttcaaatgtg aagaacttat
+atgaaaaggt aagaagccag ttaaaaaaca atgccaagga aattggaaac ggctgctttg
+aattttacca caaatgcgat aacacgtgca tggaaagtgt caaaaatggg acttatgact
+acccaaaata ctcagaggaa gcaaaattaa acagagaaga aatagatggg gtaaagctgg
+aatcaacaag gatttaccag attttggcga tctattcaac tgtcgccagt tcattggtac
+tggtagtctc cctgggggca atcagtttct ggatgtgctc taatgggtct ct
+> GQ402201
+caatactagt agttctgcta tatacatttg caaccgcaaa tgcagacaca ttatgtatag
+gttatcatgc gaacaattca acagacactg tagacacagt actagaaaag aatgtaacag
+taacacactc tgttaacctt ctagaagaca agcataacgg gaaactatgc aaactaagag
+gggtagcccc attgcatttg ggtaaatgta acattgctgg ctggatcctg ggaaatccag
+agtgtgaatc actctccaca gcaagctcat ggtcctacat tgtggaaaca tctagttcag
+acaatggaac gtgttaccca ggagatttca tcgattatga ggagctaaga gagcaattga
+gctcagtgtc atcatttgaa aggtttgaga tattccccaa gacaagttca tggcccaatc
+atgactcgaa caaaggtgta acggcagcat gtcctcatgc tggagcaaaa agcttctaca
+aaaatttaat atggctagtt aaaaaaggaa attcataccc aaagctcagc aaatcctaca
+ttaatgataa agggaaagaa gtcctcgtgc tatggggcat tcaccatcca tctactagtg
+ctgaccaaca aagtctctat cagaatgcag atgcatatgt ttttgtgggg tcatcaagat
+acagcaagaa gttcaagccg gaaatagcaa taagacccaa agtgagggat caagaaggga
+gaatgaacta ttactggaca ctagtagagc cgggagacaa aataacattc gaagcaactg
+gaaatctagt ggtaccgaga tatgcattcg caatggaaag aaatgctgga tctggtatta
+tcatttcaga tacaccagtc cacgattgca atacaacttg tcagacaccc aagggtgcta
+taaacaccag cctcccattt cagaatatac atccgatcac aattggaaaa tgtccaaaat
+atgtaaaaag cacaaaattg agactggcca caggattgag gaatgtcccg tctattcaat
+ctagaggcct atttggggcc attgccggtt tcattgaagg ggggtggaca gggatggtag
+atggatggta cggttatcac catcaaaatg agcaggggtc aggatatgca gccgacctga
+agagcacaca gaatgccatt gacgagatta ctaacaaagt aaattctgtt attgaaaaga
+tgaatacaca gttcacagca gtaggtaaag agttcaacca cctggaaaaa agaatagaga
+atttaaataa aaaagttgat gatggtttcc tggacatttg gacttacaat gccgaactgt
+tggttctatt ggaaaatgaa agaactttgg actaccacga ttcaaatgtg aagaacttat
+atgaaaaggt aagaagccag ctaaaaaaca atgccaagga aattggaaac ggctgctttg
+aattttacca caaatgcgat aacacgtgca tggaaagtgt caaaaatggg acttatgact
+acccaaaata ctcagaggaa gcaaaattaa acagagaaga aatagatggg gtaaagctgg
+aatcaacaag gatttaccag attttggcga tctattcaac tgtcgccagt tcattggtac
+tggtagtctc cctgggggca atcagtttct ggatgtgctc taatgggtct ct
+> GQ402202
+caatactagt agttctgcta tatacatttg caaccgcaaa tgcagacaca ttatgtatag
+gttatcatgc gaacaattca acagacactg tagacacagt actagaaaag aatgtaacag
+taacacactc tgttaacctt ctagaagaca agcataacgg gaaactatgc aaactaagag
+gggtagcccc attgcatttg ggtaaatgta acattgctgg ctggatcctg ggaaatccag
+agtgtgaatc actctccaca gcaagctcat ggtcctacat tgtggaaaca tctagttcag
+acaatggaac gtgttaccca ggagatttca tcgattatga ggagctaaga gagcaattga
+gctcagtgtc atcatttgaa aggtttgaga tattccccaa gacaagttca tggcccaatc
+atgactcgaa caaaggtgta acggcagcat gtcctcatgc tggagcaaaa agcttctaca
+aaaatttaat atggctagtt aaaaaaggaa attcataccc aaagctcagc aaatcctaca
+ttaatgataa agggaaagaa gtcctcgtgc tatggggcat tcaccatcca tctactagtg
+ctgaccaaca aagtctctat cagaatgcag atgcatatgt ttttgtgggg tcatcaagat
+acagcaagaa gttcaagccg gaaatagcaa taagacccaa agtgagggat caagaaggga
+gaatgaacta ttactggaca ctagtagagc cgggagacaa aataacattc gaagcaactg
+gaaatctagt ggtaccgaga tatgcattcg caatggaaag aaatgctgga tctggtatta
+tcatttcaga tacaccagtc cacgattgca atacaacttg tcagacaccc aagggtgcta
+taaacaccag cctcccattt cakaatatac atccgatcac aattggaaaa tgtccaaaat
+atgtaaaaag cacaaaattg agactggcca caggattgag gaatgtcccg tctattcaat
+ctagaggcct atttggggcc attgccggtt tcattgaagg ggggtggaca gggatggtag
+atggatggta cggttatcac catcaaaatg agcaggggtc aggatatgca gccgacctga
+agagcacaca gaatgccatt gacgagatta ctaacaaagt aaattctgtt attgaaaaga
+tgaatacaca gttcacagca gtaggtaaag agttcaacca cctggaaaca agaatagaga
+atttaaataa aaaagttgat gatggtttcc tggacatttg gacttacaat gccgaactgt
+tggttctatt ggaaaatgaa agaactttgg actaccacga ttcaaatgtg aagaacttat
+atgaaaaggt aagaagccag ttaaaaaaca atgccaagga aattggaaac ggctgctttg
+aattttacca caaatgcgat aacacgtgca tggaaagtgt caaaaatggg acttatgact
+acccaaaata ctcagaggaa gcaaaattaa acagagaaga aatagatggg gtaaagctgg
+aatcaacaag gatttaccag attttggcga tctattcaac tgtcgccagt tcattggtac
+tggtagtctc cctgggggca atcagtttct ggatgtgctc taatgggtct ct
+> GQ402203
+caatactagt agttctgcta tatacatttg caaccgcaaa tgcagacaca ttatgtatag
+gttatcatgc gaacaattca acagacactg tagacacagt actagaaaag aatgtaacag
+taacacactc tgttaacctt ctagaagaca agcataacgg gaaactatgc aaactaagag
+gggtagcccc attgcatttg ggtaaatgta acattgctgg ctggatcctg ggaaatccag
+agtgtgaatc actctccaca gcaagctcat ggtcctacat tgtggaaaca tctagttcag
+acaatggaac gtgttaccca ggagatttca tcgattatga ggagctaaga gagcaattga
+gctcagtgtc atcatttgaa aggtttgaga tattccccaa gacaagttca tggcccaatc
+atgactcgaa caaaggtgta acggcagcat gtcctcatgc tggagcaaaa agcttctaca
+aaaatttaat atggctagtt aaaaaaggaa attcataccc aaagctcagc aaatcctaca
+ttaatgataa agggaaagaa gtcctcgtgc tatggggcat tcaccatcca tctactagtg
+ctgaccaaca aagtctctat cagaatgcag atgcatatgt ttttgtgggg tcatcaagat
+acagcaagaa gttcaagccg gaaatagcaa taagacccaa agtgagggat caagaaggga
+gaatgaacta ttactggaca ctagtagagc cgggagacaa aataacattc gaagcaactg
+gaaatctagt ggtaccgaga tatgcattcg caatggaaag aaatgctgga tctggtatta
+tcatttcaga tacaccagtc cacgattgca atacaacttg tcagacaccc aagggtgcta
+taaacaccag cctcccattt cataatatac atccgatcac aattggaaaa tgtccaaaat
+atgtaaaaag cacaaaattg agactggcca caggattgag gaatgtcccg tctattcaat
+ctagaggcct atttggggcc attgccggtt tcattgaagg ggggtggaca gggatggtag
+atggatggta cggttatcac catcaaaatg agcaggggtc aggatatgca gccgacctga
+agagcacaca gaatgccatt gacgagatta ctaacaaagt aaattctgtt attgaaaaga
+tgaatacaca gttcacagca gtaggtaaag agttcaacca cctggaaaca agaatagaga
+atttaaacaa aaaagttgat gatggtttcc tggacatttg gacttacaat gccgaactgt
+tggttctatt ggaaaatgaa agaactttgg actaccacga ttcaaatgtg aagaacttat
+atgaaaaggt aagaagccag ttaaaaaaca atgccaagga aattggaaac ggctgctttg
+aattttacca caaatgcgat aacacgtgca tggaaagtgt caaaaatggg acttatgact
+acccaaaata ctcagaggaa gcaaaattaa acagagaaga aatagatggg gtaaagctgg
+aatcaacaag gatttaccag attttggcga tctattcaac tgtcgccagt tcattggtac
+tggtagtctc cctgggggca atcagtttct ggatgtgctc taatgggtct ct
+> GQ402204
+caatactagt agttctgcta tatacatttg caaccgcaaa tgcagacaca ttatgtatag
+gttatcatgc gaacaattca acagacactg tagacacagt actagaaaag aatgtaacag
+taacacactc tgttaacctt ctagaagaca agcataacgg gaaactatgc aaactaagag
+gggtagcccc attgcatttg ggtaaatgta acattgctgg ctggatcctg ggaaatccag
+agtgtgaatc actctccaca gcaagctcat ggtcctacat tgtggaaaca tctagttcag
+acaatggaac gtgttaccca ggagatttca tcgattatga ggagctaaga gagcaattga
+gctcagtgtc atcatttgaa aggtttgaga tattccccaa gacaagttca tggcccaatc
+atgactcgaa caaaggtgta acggcagcat gtcctcatgc tggagcaaaa agcttctaca
+aaaatttaat atggctagtt aaaaaaggaa attcataccc aaagctcagc aaatcctaca
+ttaatgataa agggaaagaa gtcctcgtgc tatggggcat tcaccatcca tctactagtg
+ctgaccaaca aagtctctat cagaatgcag atgcatatgt ttttgtgggg tcatcaagat
+acagcaagaa gttcaagccg gaaatagcaa taagacccaa agtgagggat caagaaggga
+gaatgaacta ttactggaca ctagtagagc cgggagacaa aataacattc gaagcaactg
+gaaatctagt ggtaccgaga tatgcattcg caatggaaag aaatgctgga tctggtatta
+tcatttcaga tacaccagtc cacgattgca atacaacttg tcagacaccc aagggtgcta
[TRUNCATED]

To get the complete diff run:
    svnlook diff /svnroot/adegenet -r 631