[adegenet-commits] r231 - pkg/man

[noreply at r-forge.r-project.org]

Author: jombart
Date: 2009-01-24 21:31:34 +0100 (Sat, 24 Jan 2009)
New Revision: 231

Modified:
   pkg/man/as.genind.Rd
   pkg/man/as.genpop.Rd
   pkg/man/df2genind.Rd
Log:
doc fixes


Modified: pkg/man/as.genind.Rd
===================================================================
--- pkg/man/as.genind.Rd	2009-01-24 20:03:09 UTC (rev 230)
+++ pkg/man/as.genind.Rd	2009-01-24 20:31:34 UTC (rev 231)
@@ -38,9 +38,9 @@
   \item{prevcall}{call of an object}
   \item{ploidy}{an integer indicating the degree of ploidy of
     the genotypes. Beware: 2 is not an integer, but as.integer(2) is.}
-  \item{\code{type}:}{ a character string indicating the type of
-      marker: 'codom' stands for 'codominant' (e.g. microstallites,
-      allozymes); 'PA' stands for 'presence/absence' (e.g. AFLP).}
+  \item{type}{ a character string indicating the type of
+    marker: 'codom' stands for 'codominant' (e.g. microstallites,
+    allozymes); 'PA' stands for 'presence/absence' (e.g. AFLP).}
   \item{x}{an object}
 }
 \value{

Modified: pkg/man/as.genpop.Rd
===================================================================
--- pkg/man/as.genpop.Rd	2009-01-24 20:03:09 UTC (rev 230)
+++ pkg/man/as.genpop.Rd	2009-01-24 20:31:34 UTC (rev 231)
@@ -20,7 +20,7 @@
 }
 \usage{
 genpop(tab,prevcall=NULL, ploidy=as.integer(2), type=c("codom","domin"))
-as.genpop(tab, type=c("codom","domin"), prevcall=NULL)
+as.genpop(tab, prevcall=NULL, ploidy=as.integer(2), type=c("codom","domin"))
 is.genpop(x)
 }
 \arguments{

Modified: pkg/man/df2genind.Rd
===================================================================
--- pkg/man/df2genind.Rd	2009-01-24 20:03:09 UTC (rev 230)
+++ pkg/man/df2genind.Rd	2009-01-24 20:31:34 UTC (rev 231)
@@ -37,7 +37,7 @@
   \item{pop}{an optional factor giving the population of each individual.}
   \item{missing}{can be NA, 0 or "mean". See details section.}
   \item{ploidy}{an integer indicating the degree of ploidy of the genotypes.}
-  \item{\code{type}:}{ a character string indicating the type of
+  \item{type}{ a character string indicating the type of
       marker: 'codom' stands for 'codominant' (e.g. microstallites,
       allozymes); 'domin' stands for 'dominant' (e.g. AFLP, RAPD).}
   \item{x}{a \linkS4class{genind} object}