[adegenet-commits] r146 - pkg

noreply at r-forge.r-project.org noreply at r-forge.r-project.org
Sun Jun 29 17:45:57 CEST 2008


Author: jombart
Date: 2008-06-29 17:45:57 +0200 (Sun, 29 Jun 2008)
New Revision: 146

Modified:
   pkg/TODO
Log:
Updated TOTO


Modified: pkg/TODO
===================================================================
--- pkg/TODO	2008-06-29 15:42:36 UTC (rev 145)
+++ pkg/TODO	2008-06-29 15:45:57 UTC (rev 146)
@@ -26,7 +26,7 @@
 
 # CODE ISSUES:
 ==============
-* fix missing data indication in summaries
+* fix missing data indication in summaries -- done (TJ)
 
 # DOCUMENTATION ISSUES:
 =======================
@@ -35,11 +35,10 @@
 # NEW IMPLEMENTATIONS:
 =====================
 * implement different levels of ploidy in genind / genpop objects.
-  - put some stop where needed when ploidy!=2 is not handled
+  - put some stop where needed when ploidy!=2 is not handled -- done (TJ)
   - adapt intput functions to different degree of ploidy -- done (TJ)
   - adapt genind2df -- done (TJ)
-  - look for other functions to adapt
-* implement classical Fst sensu Weir 1996
+  - look for other functions to adapt -- done (TJ)
 
 
 # TESTING:
@@ -58,6 +57,11 @@
 * Implement a method to merge different markers for the same individuals
 * Build accessors for marker names, indiv names, pop names, spatial coords, ... -- done in part (nLoc) (TJ)
 * Return a spatial object from monmonier (class sp?)
+* implement classical Fst sensu Weir 1996
+* Implement different levels of ploidy in:
+- hybridize
+- read.structure
+- propShared
 
 
 # LONG TERM



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