[Vegan-commits] r2449 - in pkg/vegan: R man

[noreply at r-forge.r-project.org]

Author: jarioksa
Date: 2013-02-20 08:51:22 +0100 (Wed, 20 Feb 2013)
New Revision: 2449

Modified:
   pkg/vegan/R/metaMDSiter.R
   pkg/vegan/R/print.monoMDS.R
   pkg/vegan/man/monoMDS.Rd
Log:
>, not <

Modified: pkg/vegan/R/metaMDSiter.R
===================================================================
--- pkg/vegan/R/metaMDSiter.R	2013-02-20 07:44:07 UTC (rev 2448)
+++ pkg/vegan/R/metaMDSiter.R	2013-02-20 07:51:22 UTC (rev 2449)
@@ -20,7 +20,7 @@
         lab <- switch(mod$icause,
                       "no. of iterations >= maxit",
                       "stress < smin",
-                      "change of stress < sratmax",
+                      "stress ratio > sratmax",
                       "scale factor of the gradient < sfgrmin")
         cat("   ", mod$iters, "iterations: ", lab, "\n")
     }

Modified: pkg/vegan/R/print.monoMDS.R
===================================================================
--- pkg/vegan/R/print.monoMDS.R	2013-02-20 07:44:07 UTC (rev 2448)
+++ pkg/vegan/R/print.monoMDS.R	2013-02-20 07:51:22 UTC (rev 2449)
@@ -33,7 +33,7 @@
     stoplab <- switch(x$icause,
                       "Maximum number of iterations (maxit) reached",
                       "Stress nearly zero (< smin)",
-                      "Stress nearly unchanged (change < sratmax)",
+                      "Stress nearly unchanged (ratio > sratmax)",
                       "Scale factor of gradient nearly zero (< sfgrmin)")
     cat("Stopped after ", x$iters, " iterations: ", stoplab, "\n", sep="")
     invisible(x)

Modified: pkg/vegan/man/monoMDS.Rd
===================================================================
--- pkg/vegan/man/monoMDS.Rd	2013-02-20 07:44:07 UTC (rev 2448)
+++ pkg/vegan/man/monoMDS.Rd	2013-02-20 07:51:22 UTC (rev 2449)
@@ -56,8 +56,8 @@
 
   \item{smin, sfgrmin, sratmax}{Convergence criteria: iterations stop
     when stress drops below \code{smin}, scale factor of the gradient
-    drops below \code{sfgrmin}, or stress ratio goes over
-    \code{sratmax} (but is still \eqn{< 1}).}
+    drops below \code{sfgrmin}, or stress ratio between two iterations
+    goes over \code{sratmax} (but is still \eqn{< 1}).}
 
   \item{x}{A \code{monoMDS} result.}