[Stacomir-commits] r525 - pkg/stacomir/man
noreply at r-forge.r-project.org
noreply at r-forge.r-project.org
Sun Sep 30 18:51:10 CEST 2018
Author: briand
Date: 2018-09-30 18:51:09 +0200 (Sun, 30 Sep 2018)
New Revision: 525
Added:
pkg/stacomir/man/stacomi_installed.Rd
Modified:
pkg/stacomir/man/barplot-report_annual-method.Rd
pkg/stacomir/man/calcmig.Rd
pkg/stacomir/man/calcule-report_ge_weight-method.Rd
pkg/stacomir/man/calcule-report_mig-method.Rd
pkg/stacomir/man/calcule-report_mig_char-method.Rd
pkg/stacomir/man/calcule-report_mig_env-method.Rd
pkg/stacomir/man/calcule-report_mig_interannual-method.Rd
pkg/stacomir/man/calcule-report_mig_mult-method.Rd
pkg/stacomir/man/calcule-report_sample_char-method.Rd
pkg/stacomir/man/calcule-report_sea_age-method.Rd
pkg/stacomir/man/calcule-report_silver_eel-method.Rd
pkg/stacomir/man/calcule-report_species-method.Rd
pkg/stacomir/man/calcule.Rd
pkg/stacomir/man/charge-ref_checkbox-method.Rd
pkg/stacomir/man/charge-ref_choice-method.Rd
pkg/stacomir/man/charge-ref_coe-method.Rd
pkg/stacomir/man/charge-ref_dc-method.Rd
pkg/stacomir/man/charge-ref_df-method.Rd
pkg/stacomir/man/charge-ref_env-method.Rd
pkg/stacomir/man/charge-ref_list-method.Rd
pkg/stacomir/man/charge-ref_par-method.Rd
pkg/stacomir/man/charge-ref_parqual-method.Rd
pkg/stacomir/man/charge-ref_parquan-method.Rd
pkg/stacomir/man/charge-ref_stage-method.Rd
pkg/stacomir/man/charge-ref_taxa-method.Rd
pkg/stacomir/man/charge-ref_textbox-method.Rd
pkg/stacomir/man/charge-ref_year-method.Rd
pkg/stacomir/man/charge-report_annual-method.Rd
pkg/stacomir/man/charge-report_dc-method.Rd
pkg/stacomir/man/charge-report_df-method.Rd
pkg/stacomir/man/charge-report_env-method.Rd
pkg/stacomir/man/charge-report_ge_weight-method.Rd
pkg/stacomir/man/charge-report_mig-method.Rd
pkg/stacomir/man/charge-report_mig_char-method.Rd
pkg/stacomir/man/charge-report_mig_env-method.Rd
pkg/stacomir/man/charge-report_mig_interannual-method.Rd
pkg/stacomir/man/charge-report_mig_mult-method.Rd
pkg/stacomir/man/charge-report_ope-method.Rd
pkg/stacomir/man/charge-report_sample_char-method.Rd
pkg/stacomir/man/charge-report_sea_age-method.Rd
pkg/stacomir/man/charge-report_silver_eel-method.Rd
pkg/stacomir/man/charge-report_species-method.Rd
pkg/stacomir/man/charge.Rd
pkg/stacomir/man/charge_complement-ref_parqual-method.Rd
pkg/stacomir/man/charge_complement.Rd
pkg/stacomir/man/charge_with_filter-ref_par-method.Rd
pkg/stacomir/man/charge_with_filter-ref_parqual-method.Rd
pkg/stacomir/man/charge_with_filter-ref_parquan-method.Rd
pkg/stacomir/man/charge_with_filter-ref_stage-method.Rd
pkg/stacomir/man/charge_with_filter-ref_taxa-method.Rd
pkg/stacomir/man/charge_with_filter.Rd
pkg/stacomir/man/chargecsv.Rd
pkg/stacomir/man/choice-ref_checkbox-method.Rd
pkg/stacomir/man/choice-ref_choice-method.Rd
pkg/stacomir/man/choice-ref_dc-method.Rd
pkg/stacomir/man/choice-ref_df-method.Rd
pkg/stacomir/man/choice-ref_env-method.Rd
pkg/stacomir/man/choice-ref_horodate-method.Rd
pkg/stacomir/man/choice-ref_list-method.Rd
pkg/stacomir/man/choice-ref_par-method.Rd
pkg/stacomir/man/choice-ref_parqual-method.Rd
pkg/stacomir/man/choice-ref_stage-method.Rd
pkg/stacomir/man/choice-ref_taxa-method.Rd
pkg/stacomir/man/choice-ref_textbox-method.Rd
pkg/stacomir/man/choice-ref_timestep-method.Rd
pkg/stacomir/man/choice-ref_timestep_daily-method.Rd
pkg/stacomir/man/choice-ref_year-method.Rd
pkg/stacomir/man/choice.Rd
pkg/stacomir/man/choice_c-ref_choice-method.Rd
pkg/stacomir/man/choice_c-ref_dc-method.Rd
pkg/stacomir/man/choice_c-ref_df-method.Rd
pkg/stacomir/man/choice_c-ref_env-method.Rd
pkg/stacomir/man/choice_c-ref_horodate-method.Rd
pkg/stacomir/man/choice_c-ref_list-method.Rd
pkg/stacomir/man/choice_c-ref_par-method.Rd
pkg/stacomir/man/choice_c-ref_stage-method.Rd
pkg/stacomir/man/choice_c-ref_taxa-method.Rd
pkg/stacomir/man/choice_c-ref_textbox-method.Rd
pkg/stacomir/man/choice_c-ref_timestep_daily-method.Rd
pkg/stacomir/man/choice_c-ref_year-method.Rd
pkg/stacomir/man/choice_c-report_annual-method.Rd
pkg/stacomir/man/choice_c-report_dc-method.Rd
pkg/stacomir/man/choice_c-report_df-method.Rd
pkg/stacomir/man/choice_c-report_env-method.Rd
pkg/stacomir/man/choice_c-report_ge_weight-method.Rd
pkg/stacomir/man/choice_c-report_mig-method.Rd
pkg/stacomir/man/choice_c-report_mig_char-method.Rd
pkg/stacomir/man/choice_c-report_mig_env-method.Rd
pkg/stacomir/man/choice_c-report_mig_interannual-method.Rd
pkg/stacomir/man/choice_c-report_mig_mult-method.Rd
pkg/stacomir/man/choice_c-report_sample_char-method.Rd
pkg/stacomir/man/choice_c-report_sea_age-method.Rd
pkg/stacomir/man/choice_c-report_silver_eel-method.Rd
pkg/stacomir/man/choice_c-report_species-method.Rd
pkg/stacomir/man/choice_c.Rd
pkg/stacomir/man/choicemult-ref_choice-method.Rd
pkg/stacomir/man/choicemult-ref_dc-method.Rd
pkg/stacomir/man/choicemult-ref_horodate-method.Rd
pkg/stacomir/man/choicemult-ref_par-method.Rd
pkg/stacomir/man/choicemult-ref_parqual-method.Rd
pkg/stacomir/man/choicemult-ref_stage-method.Rd
pkg/stacomir/man/choicemult-ref_taxa-method.Rd
pkg/stacomir/man/choicemult-ref_timestep-method.Rd
pkg/stacomir/man/choicemult.Rd
pkg/stacomir/man/coef_durif.Rd
pkg/stacomir/man/colortable.Rd
pkg/stacomir/man/connect-report_annual-method.Rd
pkg/stacomir/man/connect-report_dc-method.Rd
pkg/stacomir/man/connect-report_df-method.Rd
pkg/stacomir/man/connect-report_env-method.Rd
pkg/stacomir/man/connect-report_ge_weight-method.Rd
pkg/stacomir/man/connect-report_mig-method.Rd
pkg/stacomir/man/connect-report_mig_char-method.Rd
pkg/stacomir/man/connect-report_mig_env-method.Rd
pkg/stacomir/man/connect-report_mig_interannual-method.Rd
pkg/stacomir/man/connect-report_mig_mult-method.Rd
pkg/stacomir/man/connect-report_ope-method.Rd
pkg/stacomir/man/connect-report_sample_char-method.Rd
pkg/stacomir/man/connect-report_sea_age-method.Rd
pkg/stacomir/man/connect-report_silver_eel-method.Rd
pkg/stacomir/man/connect-report_species-method.Rd
pkg/stacomir/man/createmessage.Rd
pkg/stacomir/man/current_end_date-ref_timestep-method.Rd
pkg/stacomir/man/current_end_date.Rd
pkg/stacomir/man/currentstart_date-ref_timestep-method.Rd
pkg/stacomir/man/currentstart_date.Rd
pkg/stacomir/man/end_date-ref_timestep-method.Rd
pkg/stacomir/man/end_date.Rd
pkg/stacomir/man/envir_stacomi.Rd
pkg/stacomir/man/fun_aggreg_for_plot.Rd
pkg/stacomir/man/fun_char_spe.Rd
pkg/stacomir/man/fun_date_extraction.Rd
pkg/stacomir/man/fun_report_mig_interannual.Rd
pkg/stacomir/man/fun_report_mig_mult.Rd
pkg/stacomir/man/fun_report_mig_mult_overlaps.Rd
pkg/stacomir/man/fun_stage_durif.Rd
pkg/stacomir/man/fun_table_per_dis.Rd
pkg/stacomir/man/fun_weight_conversion.Rd
pkg/stacomir/man/fun_write_monthly.Rd
pkg/stacomir/man/funbarchart1DC.Rd
pkg/stacomir/man/funbarchart1DF.Rd
pkg/stacomir/man/funbarchartDC.Rd
pkg/stacomir/man/funbarchartDF.Rd
pkg/stacomir/man/funboxDC.Rd
pkg/stacomir/man/funboxDF.Rd
pkg/stacomir/man/funboxplotreport_sample_char.Rd
pkg/stacomir/man/funchartDC.Rd
pkg/stacomir/man/funchartDF.Rd
pkg/stacomir/man/fundensityreport_sample_char.Rd
pkg/stacomir/man/fungraph.Rd
pkg/stacomir/man/fungraph_glasseel.Rd
pkg/stacomir/man/funout.Rd
pkg/stacomir/man/funplotreport_sea_age.Rd
pkg/stacomir/man/funplotreport_silver_eel.Rd
pkg/stacomir/man/funpointreport_sample_char.Rd
pkg/stacomir/man/funstat.Rd
pkg/stacomir/man/funstat_daily.Rd
pkg/stacomir/man/funtable.Rd
pkg/stacomir/man/funtableDC.Rd
pkg/stacomir/man/funtableDF.Rd
pkg/stacomir/man/funtablereport_ge_weight.Rd
pkg/stacomir/man/funtablereport_sample_char.Rd
pkg/stacomir/man/funtablereport_sea_age.Rd
pkg/stacomir/man/funtablereport_silver_eel.Rd
pkg/stacomir/man/get_step_label-ref_timestep-method.Rd
pkg/stacomir/man/get_step_label.Rd
pkg/stacomir/man/get_year-ref_timestep-method.Rd
pkg/stacomir/man/get_year.Rd
pkg/stacomir/man/getdateDebut-ref_timestep-method.Rd
pkg/stacomir/man/getdateDebut.Rd
pkg/stacomir/man/getdbname.Rd
pkg/stacomir/man/getnocurrent_step-ref_timestep-method.Rd
pkg/stacomir/man/getnocurrent_step.Rd
pkg/stacomir/man/getvalue-ref_period-method.Rd
pkg/stacomir/man/getvalue.Rd
pkg/stacomir/man/graphdate.Rd
pkg/stacomir/man/hTablereport_mig.Rd
pkg/stacomir/man/hTablereport_mig_mult.Rd
pkg/stacomir/man/h_report_dc.Rd
pkg/stacomir/man/h_report_df.Rd
pkg/stacomir/man/h_report_dfdc.Rd
pkg/stacomir/man/h_report_env.Rd
pkg/stacomir/man/h_report_envgraph.Rd
pkg/stacomir/man/h_report_ge_weight.Rd
pkg/stacomir/man/h_report_mig.Rd
pkg/stacomir/man/h_report_mig_annual.Rd
pkg/stacomir/man/h_report_mig_char.Rd
pkg/stacomir/man/h_report_mig_env.Rd
pkg/stacomir/man/h_report_mig_interannual.Rd
pkg/stacomir/man/h_report_mig_mult.Rd
pkg/stacomir/man/h_report_mig_mult_graph.Rd
pkg/stacomir/man/h_report_mig_multcalc.Rd
pkg/stacomir/man/h_report_mig_multgraph2.Rd
pkg/stacomir/man/h_report_mig_multgraph3.Rd
pkg/stacomir/man/h_report_migcalc.Rd
pkg/stacomir/man/h_report_miggraph.Rd
pkg/stacomir/man/h_report_miggraph2.Rd
pkg/stacomir/man/h_report_migwrite.Rd
pkg/stacomir/man/h_report_ope.Rd
pkg/stacomir/man/h_report_pigment_stages.Rd
pkg/stacomir/man/h_report_sample_char.Rd
pkg/stacomir/man/h_report_sea_age.Rd
pkg/stacomir/man/h_report_silver.Rd
pkg/stacomir/man/h_report_size.Rd
pkg/stacomir/man/h_report_species.Rd
pkg/stacomir/man/hbarplotreport_annual.Rd
pkg/stacomir/man/hbilespcalc.Rd
pkg/stacomir/man/hbmCcalc.Rd
pkg/stacomir/man/hbmCplotcrossed.Rd
pkg/stacomir/man/hbmCplotqual.Rd
pkg/stacomir/man/hbmCplotquan.Rd
pkg/stacomir/man/hbmCstat.Rd
pkg/stacomir/man/hbmmCEcalc.Rd
pkg/stacomir/man/hbmmCEgraph.Rd
pkg/stacomir/man/hcalc.Rd
pkg/stacomir/man/hexp.Rd
pkg/stacomir/man/hgraph_report_mig_interannual.Rd
pkg/stacomir/man/hgraph_report_mig_interannual2.Rd
pkg/stacomir/man/hgraph_report_mig_interannual3.Rd
pkg/stacomir/man/hgraph_report_mig_interannual4.Rd
pkg/stacomir/man/hgraph_report_mig_interannual5.Rd
pkg/stacomir/man/hgraph_report_mig_interannual7.Rd
pkg/stacomir/man/houtDC.Rd
pkg/stacomir/man/houtDF.Rd
pkg/stacomir/man/houtreport_mig.Rd
pkg/stacomir/man/houtreport_mig_mult.Rd
pkg/stacomir/man/hplot.Rd
pkg/stacomir/man/hplotbilesp.Rd
pkg/stacomir/man/hplotreport_annual.Rd
pkg/stacomir/man/hreg.Rd
pkg/stacomir/man/hsummarybilesp.Rd
pkg/stacomir/man/hsummaryreport_migInterannuelle.Rd
pkg/stacomir/man/hxtablereport_annual.Rd
pkg/stacomir/man/interface_graphique.Rd
pkg/stacomir/man/interface_report_annual.Rd
pkg/stacomir/man/interface_report_dc.Rd
pkg/stacomir/man/interface_report_df.Rd
pkg/stacomir/man/interface_report_env.Rd
pkg/stacomir/man/interface_report_ge_weight.Rd
pkg/stacomir/man/interface_report_mig.Rd
pkg/stacomir/man/interface_report_mig_char.Rd
pkg/stacomir/man/interface_report_mig_env.Rd
pkg/stacomir/man/interface_report_mig_interannual.Rd
pkg/stacomir/man/interface_report_mig_mult.Rd
pkg/stacomir/man/interface_report_sample_char.Rd
pkg/stacomir/man/interface_report_sea_age.Rd
pkg/stacomir/man/interface_report_silver_eel.Rd
pkg/stacomir/man/interface_report_species.Rd
pkg/stacomir/man/load_stacomi.Rd
pkg/stacomir/man/model-report_ge_weight-method.Rd
pkg/stacomir/man/model.Rd
pkg/stacomir/man/plot-report_annual-missing-method.Rd
pkg/stacomir/man/plot-report_dc-ANY-method.Rd
pkg/stacomir/man/plot-report_df-ANY-method.Rd
pkg/stacomir/man/plot-report_env-missing-method.Rd
pkg/stacomir/man/plot-report_ge_weight-missing-method.Rd
pkg/stacomir/man/plot-report_mig-ANY-method.Rd
pkg/stacomir/man/plot-report_mig_char-missing-method.Rd
pkg/stacomir/man/plot-report_mig_env-missing-method.Rd
pkg/stacomir/man/plot-report_mig_interannual-missing-method.Rd
pkg/stacomir/man/plot-report_mig_mult-missing-method.Rd
pkg/stacomir/man/plot-report_sample_char-missing-method.Rd
pkg/stacomir/man/plot-report_sea_age-missing-method.Rd
pkg/stacomir/man/plot-report_silver_eel-missing-method.Rd
pkg/stacomir/man/plot-report_species-missing-method.Rd
pkg/stacomir/man/print-report_dc-method.Rd
pkg/stacomir/man/print-report_df-method.Rd
pkg/stacomir/man/print-report_mig-method.Rd
pkg/stacomir/man/print-report_mig_mult-method.Rd
pkg/stacomir/man/print-report_sample_char-method.Rd
pkg/stacomir/man/print-report_sea_age-method.Rd
pkg/stacomir/man/print-report_silver_eel-method.Rd
pkg/stacomir/man/progress_bar.Rd
pkg/stacomir/man/quitte.Rd
pkg/stacomir/man/r_ann.Rd
pkg/stacomir/man/r_ann_adour.Rd
pkg/stacomir/man/r_dc.Rd
pkg/stacomir/man/r_df.Rd
pkg/stacomir/man/r_env.Rd
pkg/stacomir/man/r_gew.Rd
pkg/stacomir/man/r_mig.Rd
pkg/stacomir/man/r_mig_char.Rd
pkg/stacomir/man/r_mig_dc.Rd
pkg/stacomir/man/r_mig_df.Rd
pkg/stacomir/man/r_mig_env.Rd
pkg/stacomir/man/r_mig_interannual.Rd
pkg/stacomir/man/r_mig_interannual_vichy.Rd
pkg/stacomir/man/r_mig_mult.Rd
pkg/stacomir/man/r_mig_mult_dc.Rd
pkg/stacomir/man/r_mig_mult_df.Rd
pkg/stacomir/man/r_mig_mult_ope.Rd
pkg/stacomir/man/r_mig_ope.Rd
pkg/stacomir/man/r_sample_char.Rd
pkg/stacomir/man/r_seaa.Rd
pkg/stacomir/man/r_silver.Rd
pkg/stacomir/man/ref_checkbox-class.Rd
pkg/stacomir/man/ref_choice-class.Rd
pkg/stacomir/man/ref_coe-class.Rd
pkg/stacomir/man/ref_dc-class.Rd
pkg/stacomir/man/ref_df-class.Rd
pkg/stacomir/man/ref_env-class.Rd
pkg/stacomir/man/ref_horodate-class.Rd
pkg/stacomir/man/ref_list-class.Rd
pkg/stacomir/man/ref_par-class.Rd
pkg/stacomir/man/ref_parqual-class.Rd
pkg/stacomir/man/ref_parquan-class.Rd
pkg/stacomir/man/ref_period-class.Rd
pkg/stacomir/man/ref_stage-class.Rd
pkg/stacomir/man/ref_taxa-class.Rd
pkg/stacomir/man/ref_textbox-class.Rd
pkg/stacomir/man/ref_timestep-class.Rd
pkg/stacomir/man/ref_timestepChar-class.Rd
pkg/stacomir/man/ref_timestep_daily-class.Rd
pkg/stacomir/man/ref_year-class.Rd
pkg/stacomir/man/report_annual-class.Rd
pkg/stacomir/man/report_dc-class.Rd
pkg/stacomir/man/report_df-class.Rd
pkg/stacomir/man/report_env-class.Rd
pkg/stacomir/man/report_ge_weight-class.Rd
pkg/stacomir/man/report_mig-class.Rd
pkg/stacomir/man/report_mig_char-class.Rd
pkg/stacomir/man/report_mig_env-class.Rd
pkg/stacomir/man/report_mig_interannual-class.Rd
pkg/stacomir/man/report_mig_mult-class.Rd
pkg/stacomir/man/report_ope-class.Rd
pkg/stacomir/man/report_sample_char-class.Rd
pkg/stacomir/man/report_sea_age-class.Rd
pkg/stacomir/man/report_silver_eel-class.Rd
pkg/stacomir/man/report_species-class.Rd
pkg/stacomir/man/set_starting_date-ref_timestep-method.Rd
pkg/stacomir/man/set_starting_date.Rd
pkg/stacomir/man/setasqualitative-report_mig_char-method.Rd
pkg/stacomir/man/setasqualitative.Rd
pkg/stacomir/man/setref_horodate-ref_horodate-method.Rd
pkg/stacomir/man/split_per_day.Rd
pkg/stacomir/man/stacomi.Rd
pkg/stacomir/man/summary-report_dc-method.Rd
pkg/stacomir/man/summary-report_df-method.Rd
pkg/stacomir/man/summary-report_mig-method.Rd
pkg/stacomir/man/summary-report_mig_char-method.Rd
pkg/stacomir/man/summary-report_mig_interannual-method.Rd
pkg/stacomir/man/summary-report_mig_mult-method.Rd
pkg/stacomir/man/summary-report_sample_char-method.Rd
pkg/stacomir/man/summary-report_sea_age-method.Rd
pkg/stacomir/man/summary-report_silver_eel-method.Rd
pkg/stacomir/man/summary-report_species-method.Rd
pkg/stacomir/man/supprime-ref_coe-method.Rd
pkg/stacomir/man/supprime-report_mig_interannual-method.Rd
pkg/stacomir/man/supprime-report_sea_age-method.Rd
pkg/stacomir/man/supprime.Rd
pkg/stacomir/man/validity_ref_horodate.Rd
pkg/stacomir/man/validity_year.Rd
pkg/stacomir/man/vector_to_listsql.Rd
pkg/stacomir/man/write_database-report_ge_weight-method.Rd
pkg/stacomir/man/write_database-report_mig-method.Rd
pkg/stacomir/man/write_database-report_sea_age-method.Rd
pkg/stacomir/man/write_database.Rd
pkg/stacomir/man/xtable-report_annual-method.Rd
pkg/stacomir/man/xtable-report_mig_char-method.Rd
Log:
Modified: pkg/stacomir/man/barplot-report_annual-method.Rd
===================================================================
--- pkg/stacomir/man/barplot-report_annual-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/barplot-report_annual-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -18,10 +18,9 @@
\description{
barplot method for object \link{report_annual-class}
}
-\author{
-Cedric Briand \email{cedric.briand"at"eptb-vilaine.fr}
-}
\seealso{
\link{report_annual-class} for examples
}
-
+\author{
+Cedric Briand \email{cedric.briand"at"eptb-vilaine.fr}
+}
Modified: pkg/stacomir/man/calcmig.Rd
===================================================================
--- pkg/stacomir/man/calcmig.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/calcmig.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -6,7 +6,7 @@
\title{A data frame containing the default connection arguments.
The program will use a file installed in c:/program files/stacomi but
if not found will switch to this default value}
-\format{An object of class \code{data.frame} with 1 rows and 11 columns.}
+\format{An object of class \code{data.frame} with 1 rows and 9 columns.}
\usage{
calcmig
}
@@ -16,4 +16,3 @@
if not found will switch to this default value
}
\keyword{datasets}
-
Modified: pkg/stacomir/man/calcule-report_ge_weight-method.Rd
===================================================================
--- pkg/stacomir/man/calcule-report_ge_weight-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/calcule-report_ge_weight-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -19,4 +19,3 @@
\author{
Cedric Briand \email{cedric.briand"at"eptb-vilaine.fr}
}
-
Modified: pkg/stacomir/man/calcule-report_mig-method.Rd
===================================================================
--- pkg/stacomir/man/calcule-report_mig-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/calcule-report_mig-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -7,7 +7,8 @@
\title{Transforms migration per period to daily migrations, and performs the conversion from weights to number is data
are stored as weights (glass eel).}
\usage{
-\S4method{calcule}{report_mig}(object, negative = FALSE, silent = FALSE)
+\S4method{calcule}{report_mig}(object, negative = FALSE,
+ silent = FALSE)
}
\arguments{
\item{object}{An object of class \code{\link{report_mig-class}}}
@@ -37,4 +38,3 @@
The class report_mig does not handle escapement rates nor
'devenir' i.e. the destination of the fishes.
}
-
Modified: pkg/stacomir/man/calcule-report_mig_char-method.Rd
===================================================================
--- pkg/stacomir/man/calcule-report_mig_char-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/calcule-report_mig_char-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -18,4 +18,3 @@
a single dataframe with one line per qualitative and quantitative pair. This methods allow to
cross one quantity (e.g. length) with a qualitative parameter (e.g. sex).
}
-
Modified: pkg/stacomir/man/calcule-report_mig_env-method.Rd
===================================================================
--- pkg/stacomir/man/calcule-report_mig_env-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/calcule-report_mig_env-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -19,4 +19,3 @@
\description{
Runs the calcule method in \link{report_mig_mult-class}
}
-
Modified: pkg/stacomir/man/calcule-report_mig_interannual-method.Rd
===================================================================
--- pkg/stacomir/man/calcule-report_mig_interannual-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/calcule-report_mig_interannual-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -33,4 +33,3 @@
\author{
Marion Legrand
}
-
Modified: pkg/stacomir/man/calcule-report_mig_mult-method.Rd
===================================================================
--- pkg/stacomir/man/calcule-report_mig_mult-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/calcule-report_mig_mult-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -41,8 +41,4 @@
\note{
The class does not handle escapement rates, though structurally those are present in the database. If you
want to use those you will have to do the calculation manually from the data in \code{report_mig_mult at data}.
-Note also that running the calcule method requires to have a database called test in postgres, and empty
-database in which all sqldf group by queries are run. The user and password for the test database are taken
-from the calcmig.csv configuration file.
}
-
Modified: pkg/stacomir/man/calcule-report_sample_char-method.Rd
===================================================================
--- pkg/stacomir/man/calcule-report_sample_char-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/calcule-report_sample_char-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -19,4 +19,3 @@
\author{
Cedric Briand \email{cedric.briand"at"eptb-vilaine.fr}
}
-
Modified: pkg/stacomir/man/calcule-report_sea_age-method.Rd
===================================================================
--- pkg/stacomir/man/calcule-report_sea_age-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/calcule-report_sea_age-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -26,4 +26,3 @@
\author{
Cedric Briand \email{cedric.briand"at"eptb-vilaine.fr}
}
-
Modified: pkg/stacomir/man/calcule-report_silver_eel-method.Rd
===================================================================
--- pkg/stacomir/man/calcule-report_silver_eel-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/calcule-report_silver_eel-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -25,4 +25,3 @@
\author{
Cedric Briand \email{cedric.briand"at"eptb-vilaine.fr}
}
-
Modified: pkg/stacomir/man/calcule-report_species-method.Rd
===================================================================
--- pkg/stacomir/man/calcule-report_species-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/calcule-report_species-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -21,4 +21,3 @@
per year or month or week. Data from different DC will be grouped. Counts are given per taxa,
unless there are several stages, in which case the counts correspond to taxa + stage.
}
-
Modified: pkg/stacomir/man/calcule.Rd
===================================================================
--- pkg/stacomir/man/calcule.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/calcule.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -17,4 +17,3 @@
\author{
cedric.briand
}
-
Modified: pkg/stacomir/man/charge-ref_checkbox-method.Rd
===================================================================
--- pkg/stacomir/man/charge-ref_checkbox-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/charge-ref_checkbox-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -31,4 +31,3 @@
\author{
Cedric Briand \email{cedric.briand"at"eptb-vilaine.fr}
}
-
Modified: pkg/stacomir/man/charge-ref_choice-method.Rd
===================================================================
--- pkg/stacomir/man/charge-ref_choice-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/charge-ref_choice-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -28,11 +28,8 @@
charge(object,vecteur=c("oui","non"),label="essai",selected=as.integer(1))
}
}
-\author{
-Cedric Briand \email{cedric.briand"at"eptb-vilaine.fr}
-}
\seealso{
-Other referential.objects: \code{\link{ref_checkbox-class}},
+Other referential objects: \code{\link{ref_checkbox-class}},
\code{\link{ref_choice-class}},
\code{\link{ref_coe-class}}, \code{\link{ref_dc-class}},
\code{\link{ref_df-class}},
@@ -46,4 +43,7 @@
\code{\link{ref_taxa-class}},
\code{\link{ref_year-class}}
}
-
+\author{
+Cedric Briand \email{cedric.briand"at"eptb-vilaine.fr}
+}
+\concept{referential objects}
Modified: pkg/stacomir/man/charge-ref_coe-method.Rd
===================================================================
--- pkg/stacomir/man/charge-ref_coe-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/charge-ref_coe-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -27,4 +27,3 @@
\author{
Cedric Briand \email{cedric.briand"at"eptb-vilaine.fr}
}
-
Modified: pkg/stacomir/man/charge-ref_dc-method.Rd
===================================================================
--- pkg/stacomir/man/charge-ref_dc-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/charge-ref_dc-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -19,4 +19,3 @@
\author{
Cedric Briand \email{cedric.briand"at"eptb-vilaine.fr}
}
-
Modified: pkg/stacomir/man/charge-ref_df-method.Rd
===================================================================
--- pkg/stacomir/man/charge-ref_df-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/charge-ref_df-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -25,4 +25,3 @@
\author{
Cedric Briand \email{cedric.briand"at"eptb-vilaine.fr}
}
-
Modified: pkg/stacomir/man/charge-ref_env-method.Rd
===================================================================
--- pkg/stacomir/man/charge-ref_env-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/charge-ref_env-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -25,4 +25,3 @@
\author{
Cedric Briand \email{cedric.briand"at"eptb-vilaine.fr}
}
-
Modified: pkg/stacomir/man/charge-ref_list-method.Rd
===================================================================
--- pkg/stacomir/man/charge-ref_list-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/charge-ref_list-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -29,4 +29,3 @@
\author{
Cedric Briand \email{cedric.briand"at"eptb-vilaine.fr}
}
-
Modified: pkg/stacomir/man/charge-ref_par-method.Rd
===================================================================
--- pkg/stacomir/man/charge-ref_par-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/charge-ref_par-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -25,4 +25,3 @@
\author{
Cedric Briand \email{cedric.briand"at"eptb-vilaine.fr}
}
-
Modified: pkg/stacomir/man/charge-ref_parqual-method.Rd
===================================================================
--- pkg/stacomir/man/charge-ref_parqual-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/charge-ref_parqual-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -25,4 +25,3 @@
\author{
Cedric Briand \email{cedric.briand"at"eptb-vilaine.fr}
}
-
Modified: pkg/stacomir/man/charge-ref_parquan-method.Rd
===================================================================
--- pkg/stacomir/man/charge-ref_parquan-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/charge-ref_parquan-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -25,4 +25,3 @@
\author{
Cedric Briand \email{cedric.briand"at"eptb-vilaine.fr}
}
-
Modified: pkg/stacomir/man/charge-ref_stage-method.Rd
===================================================================
--- pkg/stacomir/man/charge-ref_stage-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/charge-ref_stage-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -25,4 +25,3 @@
\author{
Cedric Briand \email{cedric.briand"at"eptb-vilaine.fr}
}
-
Modified: pkg/stacomir/man/charge-ref_taxa-method.Rd
===================================================================
--- pkg/stacomir/man/charge-ref_taxa-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/charge-ref_taxa-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -24,4 +24,3 @@
\author{
Cedric Briand \email{cedric.briand"at"eptb-vilaine.fr}
}
-
Modified: pkg/stacomir/man/charge-ref_textbox-method.Rd
===================================================================
--- pkg/stacomir/man/charge-ref_textbox-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/charge-ref_textbox-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -29,4 +29,3 @@
\author{
Cedric Briand \email{cedric.briand"at"eptb-vilaine.fr}
}
-
Modified: pkg/stacomir/man/charge-ref_year-method.Rd
===================================================================
--- pkg/stacomir/man/charge-ref_year-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/charge-ref_year-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -30,4 +30,3 @@
\author{
Cedric Briand \email{cedric.briand"at"eptb-vilaine.fr}
}
-
Modified: pkg/stacomir/man/charge-report_annual-method.Rd
===================================================================
--- pkg/stacomir/man/charge-report_annual-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/charge-report_annual-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -18,4 +18,3 @@
been made by the user
}
\keyword{internal}
-
Modified: pkg/stacomir/man/charge-report_dc-method.Rd
===================================================================
--- pkg/stacomir/man/charge-report_dc-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/charge-report_dc-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -21,4 +21,3 @@
assigned to envir_stacomi
}
\keyword{internal}
-
Modified: pkg/stacomir/man/charge-report_df-method.Rd
===================================================================
--- pkg/stacomir/man/charge-report_df-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/charge-report_df-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -21,4 +21,3 @@
assigned to envir_stacomi
}
\keyword{internal}
-
Modified: pkg/stacomir/man/charge-report_env-method.Rd
===================================================================
--- pkg/stacomir/man/charge-report_env-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/charge-report_env-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -20,4 +20,3 @@
Cedric Briand \email{cedric.briand"at"eptb-vilaine.fr}
}
\keyword{internal}
-
Modified: pkg/stacomir/man/charge-report_ge_weight-method.Rd
===================================================================
--- pkg/stacomir/man/charge-report_ge_weight-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/charge-report_ge_weight-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -20,4 +20,3 @@
\author{
Cedric Briand \email{cedric.briand"at"eptb-vilaine.fr}
}
-
Modified: pkg/stacomir/man/charge-report_mig-method.Rd
===================================================================
--- pkg/stacomir/man/charge-report_mig-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/charge-report_mig-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -24,4 +24,3 @@
\author{
Cedric Briand \email{cedric.briand"at"eptb-vilaine.fr}
}
-
Modified: pkg/stacomir/man/charge-report_mig_char-method.Rd
===================================================================
--- pkg/stacomir/man/charge-report_mig_char-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/charge-report_mig_char-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -25,4 +25,3 @@
Cedric Briand \email{cedric.briand"at"eptb-vilaine.fr}
}
\keyword{internal}
-
Modified: pkg/stacomir/man/charge-report_mig_env-method.Rd
===================================================================
--- pkg/stacomir/man/charge-report_mig_env-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/charge-report_mig_env-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -22,4 +22,3 @@
\author{
Cedric Briand \email{cedric.briand"at"eptb-vilaine.fr}
}
-
Modified: pkg/stacomir/man/charge-report_mig_interannual-method.Rd
===================================================================
--- pkg/stacomir/man/charge-report_mig_interannual-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/charge-report_mig_interannual-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -23,4 +23,3 @@
Cedric Briand \email{cedric.briand"at"eptb-vilaine.fr}
}
\keyword{internal}
-
Modified: pkg/stacomir/man/charge-report_mig_mult-method.Rd
===================================================================
--- pkg/stacomir/man/charge-report_mig_mult-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/charge-report_mig_mult-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -25,4 +25,3 @@
\author{
Cedric Briand \email{cedric.briand"at"eptb-vilaine.fr}
}
-
Modified: pkg/stacomir/man/charge-report_ope-method.Rd
===================================================================
--- pkg/stacomir/man/charge-report_ope-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/charge-report_ope-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -24,4 +24,3 @@
cedric.briand
}
\keyword{internal}
-
Modified: pkg/stacomir/man/charge-report_sample_char-method.Rd
===================================================================
--- pkg/stacomir/man/charge-report_sample_char-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/charge-report_sample_char-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -24,4 +24,3 @@
Cedric Briand \email{cedric.briand"at"eptb-vilaine.fr}
}
\keyword{internal}
-
Modified: pkg/stacomir/man/charge-report_sea_age-method.Rd
===================================================================
--- pkg/stacomir/man/charge-report_sea_age-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/charge-report_sea_age-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -25,4 +25,3 @@
Cedric Briand \email{cedric.briand"at"eptb-vilaine.fr}
}
\keyword{internal}
-
Modified: pkg/stacomir/man/charge-report_silver_eel-method.Rd
===================================================================
--- pkg/stacomir/man/charge-report_silver_eel-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/charge-report_silver_eel-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -27,4 +27,3 @@
Cedric Briand \email{cedric.briand"at"eptb-vilaine.fr}
}
\keyword{internal}
-
Modified: pkg/stacomir/man/charge-report_species-method.Rd
===================================================================
--- pkg/stacomir/man/charge-report_species-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/charge-report_species-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -24,4 +24,3 @@
Cedric Briand \email{cedric.briand"at"eptb-vilaine.fr}
}
\keyword{internal}
-
Modified: pkg/stacomir/man/charge.Rd
===================================================================
--- pkg/stacomir/man/charge.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/charge.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -17,4 +17,3 @@
\author{
cedric.briand
}
-
Modified: pkg/stacomir/man/charge_complement-ref_parqual-method.Rd
===================================================================
--- pkg/stacomir/man/charge_complement-ref_parqual-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/charge_complement-ref_parqual-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -31,4 +31,3 @@
\author{
Cedric Briand \email{cedric.briand"at"eptb-vilaine.fr}
}
-
Modified: pkg/stacomir/man/charge_complement.Rd
===================================================================
--- pkg/stacomir/man/charge_complement.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/charge_complement.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -17,4 +17,3 @@
\author{
cedric.briand
}
-
Modified: pkg/stacomir/man/charge_with_filter-ref_par-method.Rd
===================================================================
--- pkg/stacomir/man/charge_with_filter-ref_par-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/charge_with_filter-ref_par-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -5,8 +5,8 @@
\alias{charge_with_filter,ref_par-method}
\title{Loading method for Repar referential objects searching only those parameters existing for a DC, a Taxa, and a stage}
\usage{
-\S4method{charge_with_filter}{ref_par}(object, dc_selectionne, taxa_selectionne,
- stage_selectionne)
+\S4method{charge_with_filter}{ref_par}(object, dc_selectionne,
+ taxa_selectionne, stage_selectionne)
}
\arguments{
\item{object}{An object of class \link{ref_par-class}}
@@ -32,4 +32,3 @@
\author{
Cedric Briand \email{cedric.briand"at"eptb-vilaine.fr}
}
-
Modified: pkg/stacomir/man/charge_with_filter-ref_parqual-method.Rd
===================================================================
--- pkg/stacomir/man/charge_with_filter-ref_parqual-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/charge_with_filter-ref_parqual-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -35,4 +35,3 @@
\author{
Cedric Briand \email{cedric.briand"at"eptb-vilaine.fr}
}
-
Modified: pkg/stacomir/man/charge_with_filter-ref_parquan-method.Rd
===================================================================
--- pkg/stacomir/man/charge_with_filter-ref_parquan-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/charge_with_filter-ref_parquan-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -35,4 +35,3 @@
\author{
Cedric Briand \email{cedric.briand"at"eptb-vilaine.fr}
}
-
Modified: pkg/stacomir/man/charge_with_filter-ref_stage-method.Rd
===================================================================
--- pkg/stacomir/man/charge_with_filter-ref_stage-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/charge_with_filter-ref_stage-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -32,4 +32,3 @@
\author{
Cedric Briand \email{cedric.briand"at"eptb-vilaine.fr}
}
-
Modified: pkg/stacomir/man/charge_with_filter-ref_taxa-method.Rd
===================================================================
--- pkg/stacomir/man/charge_with_filter-ref_taxa-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/charge_with_filter-ref_taxa-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -27,4 +27,3 @@
\author{
Cedric Briand \email{cedric.briand"at"eptb-vilaine.fr}
}
-
Modified: pkg/stacomir/man/charge_with_filter.Rd
===================================================================
--- pkg/stacomir/man/charge_with_filter.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/charge_with_filter.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -18,4 +18,3 @@
cedric.briand
}
\keyword{internal}
-
Modified: pkg/stacomir/man/chargecsv.Rd
===================================================================
--- pkg/stacomir/man/chargecsv.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/chargecsv.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -33,4 +33,3 @@
Cedric Briand \email{cedric.briand"at"eptb-vilaine.fr}
}
\keyword{internal}
-
Modified: pkg/stacomir/man/choice-ref_checkbox-method.Rd
===================================================================
--- pkg/stacomir/man/choice-ref_checkbox-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/choice-ref_checkbox-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -27,4 +27,3 @@
Cedric Briand \email{cedric.briand"at"eptb-vilaine.fr}
}
\keyword{internal}
-
Modified: pkg/stacomir/man/choice-ref_choice-method.Rd
===================================================================
--- pkg/stacomir/man/choice-ref_choice-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/choice-ref_choice-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -26,4 +26,3 @@
Cedric Briand \email{cedric.briand"at"eptb-vilaine.fr}
}
\keyword{internal}
-
Modified: pkg/stacomir/man/choice-ref_dc-method.Rd
===================================================================
--- pkg/stacomir/man/choice-ref_dc-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/choice-ref_dc-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -5,7 +5,8 @@
\alias{choice,ref_dc-method}
\title{Graphical method to choose a fishway through the interface}
\usage{
-\S4method{choice}{ref_dc}(object, objectreport = NULL, is.enabled = TRUE)
+\S4method{choice}{ref_dc}(object, objectreport = NULL,
+ is.enabled = TRUE)
}
\arguments{
\item{object}{An object of class \link{ref_dc-class}}
@@ -39,4 +40,3 @@
Cedric Briand \email{cedric.briand"at"eptb-vilaine.fr}
}
\keyword{internal}
-
Modified: pkg/stacomir/man/choice-ref_df-method.Rd
===================================================================
--- pkg/stacomir/man/choice-ref_df-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/choice-ref_df-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -30,4 +30,3 @@
Cedric Briand \email{cedric.briand"at"eptb-vilaine.fr}
}
\keyword{internal}
-
Modified: pkg/stacomir/man/choice-ref_env-method.Rd
===================================================================
--- pkg/stacomir/man/choice-ref_env-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/choice-ref_env-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -6,7 +6,8 @@
\title{Choice method for ref_env referential object}
\usage{
\S4method{choice}{ref_env}(object, is.enabled = TRUE,
- title = gettext("Monitoring stations selection", domain = "R-stacomiR"))
+ title = gettext("Monitoring stations selection", domain =
+ "R-stacomiR"))
}
\arguments{
\item{object}{An object of class \link{ref_env-class}}
@@ -32,4 +33,3 @@
Cedric Briand \email{cedric.briand"at"eptb-vilaine.fr}
}
\keyword{internal}
-
Modified: pkg/stacomir/man/choice-ref_horodate-method.Rd
===================================================================
--- pkg/stacomir/man/choice-ref_horodate-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/choice-ref_horodate-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -27,4 +27,3 @@
Graphical interface
}
\keyword{internal}
-
Modified: pkg/stacomir/man/choice-ref_list-method.Rd
===================================================================
--- pkg/stacomir/man/choice-ref_list-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/choice-ref_list-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -32,4 +32,3 @@
Cedric Briand \email{cedric.briand"at"eptb-vilaine.fr}
}
\keyword{internal}
-
Modified: pkg/stacomir/man/choice-ref_par-method.Rd
===================================================================
--- pkg/stacomir/man/choice-ref_par-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/choice-ref_par-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -44,4 +44,3 @@
Cedric Briand \email{cedric.briand"at"eptb-vilaine.fr}
}
\keyword{internal}
-
Modified: pkg/stacomir/man/choice-ref_parqual-method.Rd
===================================================================
--- pkg/stacomir/man/choice-ref_parqual-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/choice-ref_parqual-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -6,8 +6,9 @@
\title{Choice method for ref_parqual referential objects, internal use}
\usage{
\S4method{choice}{ref_parqual}(object,
- label = gettext("Choice of a sample characteristic", domain = "R-stacomiR"),
- nomassign = "ref_parqual", frameassign = "frame_par", is.enabled = TRUE)
+ label = gettext("Choice of a sample characteristic", domain =
+ "R-stacomiR"), nomassign = "ref_parqual", frameassign = "frame_par",
+ is.enabled = TRUE)
}
\arguments{
\item{object}{An object of class \link{ref_parqual-class}}
@@ -42,4 +43,3 @@
Cedric Briand \email{cedric.briand"at"eptb-vilaine.fr}
}
\keyword{internal}
-
Modified: pkg/stacomir/man/choice-ref_stage-method.Rd
===================================================================
--- pkg/stacomir/man/choice-ref_stage-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/choice-ref_stage-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -5,7 +5,8 @@
\alias{choice,ref_stage-method}
\title{Choice method for ref_stage referential objects}
\usage{
-\S4method{choice}{ref_stage}(object, objectreport = NULL, is.enabled = TRUE)
+\S4method{choice}{ref_stage}(object, objectreport = NULL,
+ is.enabled = TRUE)
}
\arguments{
\item{object}{An object of class \link{ref_stage-class}}
@@ -35,4 +36,3 @@
Cedric Briand \email{cedric.briand"at"eptb-vilaine.fr}
}
\keyword{internal}
-
Modified: pkg/stacomir/man/choice-ref_taxa-method.Rd
===================================================================
--- pkg/stacomir/man/choice-ref_taxa-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/choice-ref_taxa-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -5,7 +5,8 @@
\alias{choice,ref_taxa-method}
\title{Choice method for reftaxa referential objects with only one taxa selected}
\usage{
-\S4method{choice}{ref_taxa}(object, objectreport = NULL, is.enabled = TRUE)
+\S4method{choice}{ref_taxa}(object, objectreport = NULL,
+ is.enabled = TRUE)
}
\arguments{
\item{object}{An object of class \link{ref_taxa-class}}
@@ -31,4 +32,3 @@
Cedric Briand \email{cedric.briand"at"eptb-vilaine.fr}
}
\keyword{internal}
-
Modified: pkg/stacomir/man/choice-ref_textbox-method.Rd
===================================================================
--- pkg/stacomir/man/choice-ref_textbox-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/choice-ref_textbox-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -29,4 +29,3 @@
Cedric Briand \email{cedric.briand"at"eptb-vilaine.fr}
}
\keyword{internal}
-
Modified: pkg/stacomir/man/choice-ref_timestep-method.Rd
===================================================================
--- pkg/stacomir/man/choice-ref_timestep-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/choice-ref_timestep-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -14,4 +14,3 @@
Method to select timesteps from the graphical interface
}
\keyword{internal}
-
Modified: pkg/stacomir/man/choice-ref_timestep_daily-method.Rd
===================================================================
--- pkg/stacomir/man/choice-ref_timestep_daily-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/choice-ref_timestep_daily-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -14,4 +14,3 @@
Method to select timesteps from the graphical interface
}
\keyword{internal}
-
Modified: pkg/stacomir/man/choice-ref_year-method.Rd
===================================================================
--- pkg/stacomir/man/choice-ref_year-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/choice-ref_year-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -7,7 +7,8 @@
\usage{
\S4method{choice}{ref_year}(object, nomassign = "ref_year",
funoutlabel = gettext("Year selected\\n", domain = "R-stacomiR"),
- titleFrame = gettext("Year choice", domain = "R-stacomiR"), preselect = 1)
+ titleFrame = gettext("Year choice", domain = "R-stacomiR"),
+ preselect = 1)
}
\arguments{
\item{object}{An object of class \link{ref_year-class}}
@@ -38,4 +39,3 @@
Cedric Briand \email{cedric.briand"at"eptb-vilaine.fr}
}
\keyword{internal}
-
Modified: pkg/stacomir/man/choice.Rd
===================================================================
--- pkg/stacomir/man/choice.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/choice.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -18,4 +18,3 @@
cedric.briand
}
\keyword{internal}
-
Modified: pkg/stacomir/man/choice_c-ref_choice-method.Rd
===================================================================
--- pkg/stacomir/man/choice_c-ref_choice-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/choice_c-ref_choice-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -26,4 +26,3 @@
\author{
Cedric Briand \email{cedric.briand"at"eptb-vilaine.fr}
}
-
Modified: pkg/stacomir/man/choice_c-ref_dc-method.Rd
===================================================================
--- pkg/stacomir/man/choice_c-ref_dc-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/choice_c-ref_dc-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -32,4 +32,3 @@
\author{
Cedric Briand \email{cedric.briand"at"eptb-vilaine.fr}
}
-
Modified: pkg/stacomir/man/choice_c-ref_df-method.Rd
===================================================================
--- pkg/stacomir/man/choice_c-ref_df-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/choice_c-ref_df-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -32,4 +32,3 @@
\author{
Cedric Briand \email{cedric.briand"at"eptb-vilaine.fr}
}
-
Modified: pkg/stacomir/man/choice_c-ref_env-method.Rd
===================================================================
--- pkg/stacomir/man/choice_c-ref_env-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/choice_c-ref_env-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -19,4 +19,3 @@
\author{
Cedric Briand \email{cedric.briand"at"eptb-vilaine.fr}
}
-
Modified: pkg/stacomir/man/choice_c-ref_horodate-method.Rd
===================================================================
--- pkg/stacomir/man/choice_c-ref_horodate-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/choice_c-ref_horodate-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -29,4 +29,3 @@
\description{
Command line
}
-
Modified: pkg/stacomir/man/choice_c-ref_list-method.Rd
===================================================================
--- pkg/stacomir/man/choice_c-ref_list-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/choice_c-ref_list-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -29,4 +29,3 @@
\author{
Cedric Briand \email{cedric.briand"at"eptb-vilaine.fr}
}
-
Modified: pkg/stacomir/man/choice_c-ref_par-method.Rd
===================================================================
--- pkg/stacomir/man/choice_c-ref_par-method.Rd 2018-09-28 19:38:53 UTC (rev 524)
+++ pkg/stacomir/man/choice_c-ref_par-method.Rd 2018-09-30 16:51:09 UTC (rev 525)
@@ -25,4 +25,3 @@
\author{
Cedric Briand \email{cedric.briand"at"eptb-vilaine.fr}
}
-
Modified: pkg/stacomir/man/choice_c-ref_stage-method.Rd
===================================================================
[TRUNCATED]
To get the complete diff run:
svnlook diff /svnroot/stacomir -r 525
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