[Seqinr-commits] r1851 - www/src/mainmatter

[noreply at r-forge.r-project.org]

Author: jeanlobry
Date: 2016-06-01 14:36:46 +0200 (Wed, 01 Jun 2016)
New Revision: 1851

Modified:
   www/src/mainmatter/getseqacnuc.rnw
   www/src/mainmatter/getseqacnuc.tex
Log:
showing closure issue

Modified: www/src/mainmatter/getseqacnuc.rnw
===================================================================
--- www/src/mainmatter/getseqacnuc.rnw	2016-05-31 19:31:19 UTC (rev 1850)
+++ www/src/mainmatter/getseqacnuc.rnw	2016-06-01 12:36:46 UTC (rev 1851)
@@ -136,7 +136,8 @@
 }
 names(ntaxa) <- banks
 @ 
-<<plottaxaperbank,fig=T,eval=T,width=6,height=8>>=
+
+<<plotpb,fig=T,eval=T,width=6,height=8>>=
 ntaxa <- ntaxa[!is.na(ntaxa)]
 dotchart(log10(ntaxa[order(ntaxa)]), pch = 19,
 main = "Number of taxa in available databases",
@@ -473,7 +474,7 @@
 @ 
 
 There is no stop codon here because the sequence is partial.
-If you are experiencing a strong closure issue problem here,
+If you are experiencing a strong closure issue here,
 just close the bank:
 
 <<closebanembltp,fig=F,echo=T>>=

Modified: www/src/mainmatter/getseqacnuc.tex
===================================================================
--- www/src/mainmatter/getseqacnuc.tex	2016-05-31 19:31:19 UTC (rev 1850)
+++ www/src/mainmatter/getseqacnuc.tex	2016-06-01 12:36:46 UTC (rev 1851)
@@ -229,6 +229,7 @@
  names(ntaxa) <- banks
 \end{Sinput}
 \end{Schunk}
+
 \begin{Schunk}
 \begin{Sinput}
  ntaxa <- ntaxa[!is.na(ntaxa)]
@@ -237,7 +238,7 @@
  xlab = "Log10(number of taxa)")
 \end{Sinput}
 \end{Schunk}
-\includegraphics{../figs/getseqacnuc-plottaxaperbank}
+\includegraphics{../figs/getseqacnuc-plotpb}
 
 \section{Make your query}
 
@@ -812,7 +813,7 @@
 \end{Schunk}
 
 There is no stop codon here because the sequence is partial.
-If you are experiencing a strong closure issue problem here,
+If you are experiencing a strong closure issue here,
 just close the bank:
 
 \begin{Schunk}
@@ -844,7 +845,7 @@
 There were two compilation steps:
 
 \begin{itemize}
-  \item \Rlogo{} compilation time was: Tue May 31 21:23:09 2016
+  \item \Rlogo{} compilation time was: Wed Jun  1 14:33:37 2016
   \item \LaTeX{} compilation time was: \today
 \end{itemize}