[Seqinr-commits] r1637 - pkg/man

[noreply at r-forge.r-project.org]

Author: lobry
Date: 2009-09-03 14:24:56 +0200 (Thu, 03 Sep 2009)
New Revision: 1637

Added:
   pkg/man/plotPanels.Rd
Log:
 

Added: pkg/man/plotPanels.Rd
===================================================================
--- pkg/man/plotPanels.Rd	                        (rev 0)
+++ pkg/man/plotPanels.Rd	2009-09-03 12:24:56 UTC (rev 1637)
@@ -0,0 +1,26 @@
+\name{plotPanels}
+\alias{plotPanels}
+\title{Representation of Amplicon Size Ranges of a STR kit.}
+\description{Plot amplicon size ranges grouped by dye color.}
+\usage{plotPanels(kitname, data, xlim = NULL, cex = 0.75, alpha = 0.5)}
+\arguments{
+  \item{kitname}{string of characters for the kit name.}
+  \item{data}{an output from the \code{\link{readPanels}} function.}
+  \item{xlim}{x-axis range.}
+  \item{cex}{character expansion factor.}
+  \item{alpha}{alpha transparency chanel for colors.}
+}
+\value{none}
+\author{J.R. Lobry}
+
+\seealso{ \code{\link{readPanels}}.}
+
+\examples{
+path1 <- system.file("abif/AmpFLSTR_Panels_v1.txt", package = "seqinr")
+res1 <- readPanels(path1)
+
+par(mfrow = c(2,1))
+plotPanels("Identifiler_v1", res1)
+plotPanels("SEfiler_v1", res1)
+
+}