From kammon101 at hotmail.ca  Fri May  8 06:14:38 2015
From: kammon101 at hotmail.ca (kam kammon)
Date: Fri, 8 May 2015 00:14:38 -0400
Subject: [Rcppoctave-user] Cannot install rcppoctave
Message-ID: <BAY174-W81A49CD0C4E766B9A9B3897DE0@phx.gbl>

Hi, 

I have having the same errors installing RcppOctave as reported back in Nov 11 2014.

Ran install.packages('RcppOctave') in R and got 

"Error : /tmp/RtmpV72mPb/R.INSTALL8bb4108467/RcppOctave/man/o_addpath.Rd:40: .onLoad failed in loadNamespace() for 'RcppOctave', details:
  call: lapply(X = X, FUN = FUN, ...)
  error: object 'dlibs' not found" "

The development version for RcppOctave installed without a problem.

This time R version is 3.2.0 on a clean install of Ubuntu 15.04 64 bits. Octave version is 3.8.2 but this time is complied with  the ./configure options --with-hdf5-includedir=/usr/include/hdf5/serial --with-hdf5-libdir=/usr/lib/x86_64-linux-gnu/hdf5/serial 

Ubuntu 15.04  now allows installing both the serial and openmpi versions for hdf5 they are installed in the subdirectories .../hdf5/serial and ../hdf5/openmpi respectively. Octave seems to have a problem picking up  hdf5 in the openmpi subdirectory so  I used the serial version.

Thanks.
 		 	   		  
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From renaud at mancala.cbio.uct.ac.za  Wed May 13 11:42:21 2015
From: renaud at mancala.cbio.uct.ac.za (Renaud Gaujoux)
Date: Wed, 13 May 2015 11:42:21 +0200
Subject: [Rcppoctave-user] Cannot install rcppoctave
In-Reply-To: <BAY174-W81A49CD0C4E766B9A9B3897DE0@phx.gbl>
References: <BAY174-W81A49CD0C4E766B9A9B3897DE0@phx.gbl>
Message-ID: <CAHavPHEv1fuvye+sjMoTjdkJHwFY_V2pJgFVx=zmPBj26o2wBQ@mail.gmail.com>

Hi,

yes I need to push out a release of the development version.
>From which github branch did you install: master or develop?

Thanks.

Renaud

On 8 May 2015 at 06:14, kam kammon <kammon101 at hotmail.ca> wrote:

> Hi,
>
> I have having the same errors installing RcppOctave as reported back in
> Nov 11 2014.
>
> Ran install.packages('RcppOctave') in R and got
>
> "Error :
> /tmp/RtmpV72mPb/R.INSTALL8bb4108467/RcppOctave/man/o_addpath.Rd:40: .onLoad
> failed in loadNamespace() for 'RcppOctave', details:
>   call: lapply(X = X, FUN = FUN, ...)
>   error: object 'dlibs' not found" "
>
> The development version for RcppOctave installed without a problem.
>
> This time R version is 3.2.0 on a clean install of Ubuntu 15.04 64 bits.
> Octave version is 3.8.2 but this time is complied with  the ./configure
> options --with-hdf5-includedir=/usr/include/hdf5/serial
> --with-hdf5-libdir=/usr/lib/x86_64-linux-gnu/hdf5/serial
>
> Ubuntu 15.04  now allows installing both the serial and openmpi versions
> for hdf5 they are installed in the subdirectories .../hdf5/serial and
> ../hdf5/openmpi respectively. Octave seems to have a problem picking up
> hdf5 in the openmpi subdirectory so  I used the serial version.
>
> Thanks.
>
> _______________________________________________
> Rcppoctave-user mailing list
> Rcppoctave-user at lists.r-forge.r-project.org
> http://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/rcppoctave-user
>
>
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From kammon101 at hotmail.ca  Thu May 14 00:39:51 2015
From: kammon101 at hotmail.ca (kam kammon)
Date: Wed, 13 May 2015 18:39:51 -0400
Subject: [Rcppoctave-user] Cannot install rcppoctave
In-Reply-To: <CAHavPHEv1fuvye+sjMoTjdkJHwFY_V2pJgFVx=zmPBj26o2wBQ@mail.gmail.com>
References: <BAY174-W81A49CD0C4E766B9A9B3897DE0@phx.gbl>,
 <CAHavPHEv1fuvye+sjMoTjdkJHwFY_V2pJgFVx=zmPBj26o2wBQ@mail.gmail.com>
Message-ID: <BAY174-W1BC0AE0189EA7EDB7813B97D90@phx.gbl>

Hi, 

I installed the development version in R with the command 

devtools::install_github('renozao/RcppOctave', ref = 'develop')

I suppose it is the develop branch since the master of github apparently hasn't been updated for a year
https://github.com/renozao/RcppOctave

Thanks.


Date: Wed, 13 May 2015 11:42:21 +0200
Subject: Re: [Rcppoctave-user] Cannot install rcppoctave
From: renaud at mancala.cbio.uct.ac.za
To: kammon101 at hotmail.ca
CC: rcppoctave-user at lists.r-forge.r-project.org

Hi,
yes I need to push out a release of the development version.From which github branch did you install: master or develop?
Thanks.
Renaud
On 8 May 2015 at 06:14, kam kammon <kammon101 at hotmail.ca> wrote:



Hi, 

I have having the same errors installing RcppOctave as reported back in Nov 11 2014.

Ran install.packages('RcppOctave') in R and got 

"Error : /tmp/RtmpV72mPb/R.INSTALL8bb4108467/RcppOctave/man/o_addpath.Rd:40: .onLoad failed in loadNamespace() for 'RcppOctave', details:
  call: lapply(X = X, FUN = FUN, ...)
  error: object 'dlibs' not found" "

The development version for RcppOctave installed without a problem.

This time R version is 3.2.0 on a clean install of Ubuntu 15.04 64 bits. Octave version is 3.8.2 but this time is complied with  the ./configure options --with-hdf5-includedir=/usr/include/hdf5/serial --with-hdf5-libdir=/usr/lib/x86_64-linux-gnu/hdf5/serial 

Ubuntu 15.04  now allows installing both the serial and openmpi versions for hdf5 they are installed in the subdirectories .../hdf5/serial and ../hdf5/openmpi respectively. Octave seems to have a problem picking up  hdf5 in the openmpi subdirectory so  I used the serial version.

Thanks.
 		 	   		  

_______________________________________________

Rcppoctave-user mailing list

Rcppoctave-user at lists.r-forge.r-project.org

http://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/rcppoctave-user



 		 	   		  
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From kammon101 at hotmail.ca  Sat May 30 12:20:20 2015
From: kammon101 at hotmail.ca (kam kammon)
Date: Sat, 30 May 2015 06:20:20 -0400
Subject: [Rcppoctave-user] Cannot install rcppoctave
In-Reply-To: <BAY174-W1BC0AE0189EA7EDB7813B97D90@phx.gbl>
References: <BAY174-W81A49CD0C4E766B9A9B3897DE0@phx.gbl>, ,
 <CAHavPHEv1fuvye+sjMoTjdkJHwFY_V2pJgFVx=zmPBj26o2wBQ@mail.gmail.com>,
 <BAY174-W1BC0AE0189EA7EDB7813B97D90@phx.gbl>
Message-ID: <BAY174-W264270B1FD7449A2DE5C4C97C80@phx.gbl>

Hi, 

RcppOctave no longer works for Octave 4.0.0 which was just released.
Tried reinstall (from develop branch) and got the errors

Error : /tmp/Rtmpk5fzV0/devtools441847599d4d/renozao-RcppOctave-44ada3d/man/o_addpath.Rd:40: .onLoad failed in loadNamespace() for 'RcppOctave', details:
  call: FUN(X[[i]], ...)
  error: RcppOctave - error in Octave function `octave_config_info`:
  octave_config_info: invalid parameter 'CC_VERSION'

ERROR: installing Rd objects failed for package ?RcppOctave?
* removing ?/usr/lib/R/library/RcppOctave?
Warning: namespace ?RcppOctave? is not available and has been replaced
by .GlobalEnv when processing object ??
Error: Command failed (1)

Thanks.

From: kammon101 at hotmail.ca
To: renaud at mancala.cbio.uct.ac.za
Date: Wed, 13 May 2015 18:39:51 -0400
CC: rcppoctave-user at lists.r-forge.r-project.org
Subject: Re: [Rcppoctave-user] Cannot install rcppoctave




Hi, 

I installed the development version in R with the command 

devtools::install_github('renozao/RcppOctave', ref = 'develop')

I suppose it is the develop branch since the master of github apparently hasn't been updated for a year
https://github.com/renozao/RcppOctave

Thanks.


Date: Wed, 13 May 2015 11:42:21 +0200
Subject: Re: [Rcppoctave-user] Cannot install rcppoctave
From: renaud at mancala.cbio.uct.ac.za
To: kammon101 at hotmail.ca
CC: rcppoctave-user at lists.r-forge.r-project.org

Hi,
yes I need to push out a release of the development version.From which github branch did you install: master or develop?
Thanks.
Renaud
On 8 May 2015 at 06:14, kam kammon <kammon101 at hotmail.ca> wrote:



Hi, 

I have having the same errors installing RcppOctave as reported back in Nov 11 2014.

Ran install.packages('RcppOctave') in R and got 

"Error : /tmp/RtmpV72mPb/R.INSTALL8bb4108467/RcppOctave/man/o_addpath.Rd:40: .onLoad failed in loadNamespace() for 'RcppOctave', details:
  call: lapply(X = X, FUN = FUN, ...)
  error: object 'dlibs' not found" "

The development version for RcppOctave installed without a problem.

This time R version is 3.2.0 on a clean install of Ubuntu 15.04 64 bits. Octave version is 3.8.2 but this time is complied with  the ./configure options --with-hdf5-includedir=/usr/include/hdf5/serial --with-hdf5-libdir=/usr/lib/x86_64-linux-gnu/hdf5/serial 

Ubuntu 15.04  now allows installing both the serial and openmpi versions for hdf5 they are installed in the subdirectories .../hdf5/serial and ../hdf5/openmpi respectively. Octave seems to have a problem picking up  hdf5 in the openmpi subdirectory so  I used the serial version.

Thanks.
 		 	   		  

_______________________________________________

Rcppoctave-user mailing list

Rcppoctave-user at lists.r-forge.r-project.org

http://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/rcppoctave-user



 		 	   		  

_______________________________________________
Rcppoctave-user mailing list
Rcppoctave-user at lists.r-forge.r-project.org
http://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/rcppoctave-user 		 	   		  
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