<div dir="ltr">

<span style="color:rgb(36,39,41);font-family:Arial,"Helvetica Neue",Helvetica,sans-serif;font-size:15px;font-style:normal;font-variant-ligatures:normal;font-variant-caps:normal;font-weight:400;letter-spacing:normal;text-align:left;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px;background-color:rgb(255,255,255);text-decoration-style:initial;text-decoration-color:initial;float:none;display:inline">As a part of utilizing network data drawn at random before further processing, I am trying to call a couple of functions from the<span> </span></span><code style="margin:0px;padding:1px 5px;border:0px;font-style:normal;font-variant-ligatures:normal;font-variant-caps:normal;font-variant-numeric:inherit;font-variant-east-asian:inherit;font-weight:400;font-stretch:inherit;font-size:13px;line-height:inherit;font-family:Consolas,Menlo,Monaco,"Lucida Console","Liberation Mono","DejaVu Sans Mono","Bitstream Vera Sans Mono","Courier New",monospace,sans-serif;vertical-align:baseline;box-sizing:inherit;background-color:rgb(239,240,241);white-space:pre-wrap;color:rgb(36,39,41);letter-spacing:normal;text-align:left;text-indent:0px;text-transform:none;word-spacing:0px;text-decoration-style:initial;text-decoration-color:initial">igraph</code><span style="color:rgb(36,39,41);font-family:Arial,"Helvetica Neue",Helvetica,sans-serif;font-size:15px;font-style:normal;font-variant-ligatures:normal;font-variant-caps:normal;font-weight:400;letter-spacing:normal;text-align:left;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px;background-color:rgb(255,255,255);text-decoration-style:initial;text-decoration-color:initial;float:none;display:inline"><span> </span>package at the beginning of each iteration. The code I use is as follows:</span>

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<pre class="gmail-lang-r gmail-prettyprint gmail-prettyprinted" style="margin:0px 0px 1em;padding:5px;border:0px;font-style:normal;font-variant-ligatures:normal;font-variant-caps:normal;font-variant-numeric:inherit;font-variant-east-asian:inherit;font-weight:400;font-stretch:inherit;font-size:13px;line-height:inherit;font-family:Consolas,Menlo,Monaco,"Lucida Console","Liberation Mono","DejaVu Sans Mono","Bitstream Vera Sans Mono","Courier New",monospace,sans-serif;vertical-align:baseline;box-sizing:inherit;width:auto;max-height:600px;overflow:auto;background-color:rgb(239,240,241);display:block;color:rgb(57,51,24);word-wrap:normal;letter-spacing:normal;text-align:left;text-indent:0px;text-transform:none;word-spacing:0px;text-decoration-style:initial;text-decoration-color:initial"><code style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:13px;line-height:inherit;font-family:Consolas,Menlo,Monaco,"Lucida Console","Liberation Mono","DejaVu Sans Mono","Bitstream Vera Sans Mono","Courier New",monospace,sans-serif;vertical-align:baseline;box-sizing:inherit;background-color:rgb(239,240,241);white-space:inherit"><span class="gmail-com" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(133,140,147)">#define ARMA_64BIT_WORD</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">
</span><span class="gmail-com" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(133,140,147)">#include <RcppArmadillo.h></span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">

</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">//</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)"> </span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">[[</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">Rcpp</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">::</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">depends</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">(</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">RcppArmadillo</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">)]]</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">
</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">//</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)"> </span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">[[</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">Rcpp</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">::</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">plugins</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">(</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">cpp11</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">)]]</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">
using namespace Rcpp</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">;</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">

using arma</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">::</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">sp_mat</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">;</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">

</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">//</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)"> </span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">[[</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">Rcpp</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">::</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">export</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">]]</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">
sp_mat adj_mat</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">(</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">int n</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">,</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)"> double p</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">)</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)"> </span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">{</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">

  Environment igraph</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">(</span><span class="gmail-str" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(125,39,39)">"package:igraph"</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">);</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">
  Function game_er </span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">=</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)"> igraph</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">[</span><span class="gmail-str" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(125,39,39)">"erdos.renyi.game"</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">];</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">
  Function get_adjacency </span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">=</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)"> igraph</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">[</span><span class="gmail-str" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(125,39,39)">"get.adjacency"</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">];</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">

  List g </span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">=</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)"> game_er</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">(</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">Named</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">(</span><span class="gmail-str" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(125,39,39)">"n"</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">,</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)"> n</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">),</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)"> Named</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">(</span><span class="gmail-str" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(125,39,39)">"p"</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">,</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)"> p</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">));</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">

  NumericMatrix A_m </span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">=</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)"> get_adjacency</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">(</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">Named</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">(</span><span class="gmail-str" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(125,39,39)">"g"</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">,</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)"> g</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">));</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">

  sp_mat A </span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">=</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)"> as</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)"><</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">sp_mat</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">>(</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">A_m</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">);</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">

  </span><span class="gmail-kwd" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(16,16,148)">return</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)"> A</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">;</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">
</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">}</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">
</span></code></pre><br class="gmail-Apple-interchange-newline">



<pre class="gmail-lang-r gmail-prettyprint gmail-prettyprinted" style="margin:0px 0px 1em;padding:5px;border:0px;font-style:normal;font-variant-ligatures:normal;font-variant-caps:normal;font-variant-numeric:inherit;font-variant-east-asian:inherit;font-weight:400;font-stretch:inherit;font-size:13px;line-height:inherit;font-family:Consolas,Menlo,Monaco,"Lucida Console","Liberation Mono","DejaVu Sans Mono","Bitstream Vera Sans Mono","Courier New",monospace,sans-serif;vertical-align:baseline;box-sizing:inherit;width:auto;max-height:600px;overflow:auto;background-color:rgb(239,240,241);display:block;color:rgb(57,51,24);word-wrap:normal;letter-spacing:normal;text-align:left;text-indent:0px;text-transform:none;word-spacing:0px;text-decoration-style:initial;text-decoration-color:initial"><code style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:13px;line-height:inherit;font-family:Consolas,Menlo,Monaco,"Lucida Console","Liberation Mono","DejaVu Sans Mono","Bitstream Vera Sans Mono","Courier New",monospace,sans-serif;vertical-align:baseline;box-sizing:inherit;background-color:rgb(239,240,241);white-space:inherit"><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">/***</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)"> R
set.seed</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">(</span><span class="gmail-lit" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(125,39,39)">20130810</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">)</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">
library</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">(</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">igraph</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">)</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">

adj_mat</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">(</span><span class="gmail-lit" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(125,39,39)">100</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">,</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)"> </span><span class="gmail-lit" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(125,39,39)">0.5</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">)</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">
</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">*/</span></code></pre><pre class="gmail-lang-r gmail-prettyprint gmail-prettyprinted" style="margin:0px 0px 1em;padding:5px;border:0px;font-style:normal;font-variant-ligatures:normal;font-variant-caps:normal;font-variant-numeric:inherit;font-variant-east-asian:inherit;font-weight:400;font-stretch:inherit;font-size:13px;line-height:inherit;font-family:Consolas,Menlo,Monaco,"Lucida Console","Liberation Mono","DejaVu Sans Mono","Bitstream Vera Sans Mono","Courier New",monospace,sans-serif;vertical-align:baseline;box-sizing:inherit;width:auto;max-height:600px;overflow:auto;background-color:rgb(239,240,241);display:block;color:rgb(57,51,24);word-wrap:normal;letter-spacing:normal;text-align:left;text-indent:0px;text-transform:none;word-spacing:0px;text-decoration-style:initial;text-decoration-color:initial"><code style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:13px;line-height:inherit;font-family:Consolas,Menlo,Monaco,"Lucida Console","Liberation Mono","DejaVu Sans Mono","Bitstream Vera Sans Mono","Courier New",monospace,sans-serif;vertical-align:baseline;box-sizing:inherit;background-color:rgb(239,240,241);white-space:inherit"><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)"><br></span></code></pre><pre class="gmail-lang-r gmail-prettyprint gmail-prettyprinted" style="margin:0px 0px 1em;padding:5px;border:0px;font-style:normal;font-variant-ligatures:normal;font-variant-caps:normal;font-variant-numeric:inherit;font-variant-east-asian:inherit;font-weight:400;font-stretch:inherit;font-size:13px;line-height:inherit;font-family:Consolas,Menlo,Monaco,"Lucida Console","Liberation Mono","DejaVu Sans Mono","Bitstream Vera Sans Mono","Courier New",monospace,sans-serif;vertical-align:baseline;box-sizing:inherit;width:auto;max-height:600px;overflow:auto;background-color:rgb(239,240,241);display:block;color:rgb(57,51,24);word-wrap:normal;letter-spacing:normal;text-align:left;text-indent:0px;text-transform:none;word-spacing:0px;text-decoration-style:initial;text-decoration-color:initial"><code style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:13px;line-height:inherit;font-family:Consolas,Menlo,Monaco,"Lucida Console","Liberation Mono","DejaVu Sans Mono","Bitstream Vera Sans Mono","Courier New",monospace,sans-serif;vertical-align:baseline;box-sizing:inherit;background-color:rgb(239,240,241);white-space:inherit"><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">

<p style="margin:0px 0px 1em;padding:0px;border:0px;font-style:normal;font-variant-ligatures:normal;font-variant-caps:normal;font-variant-numeric:inherit;font-variant-east-asian:inherit;font-weight:400;font-stretch:inherit;font-size:15px;line-height:inherit;font-family:Arial,"Helvetica Neue",Helvetica,sans-serif;vertical-align:baseline;box-sizing:inherit;clear:both;color:rgb(36,39,41);letter-spacing:normal;text-align:left;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px;background-color:rgb(255,255,255);text-decoration-style:initial;text-decoration-color:initial">So, while the C++ compiles without warnings, the following error is thrown:</p><pre class="gmail-lang-r gmail-prettyprint gmail-prettyprinted" style="margin:0px 0px 1em;padding:5px;border:0px;font-style:normal;font-variant-ligatures:normal;font-variant-caps:normal;font-variant-numeric:inherit;font-variant-east-asian:inherit;font-weight:400;font-stretch:inherit;font-size:13px;line-height:inherit;font-family:Consolas,Menlo,Monaco,"Lucida Console","Liberation Mono","DejaVu Sans Mono","Bitstream Vera Sans Mono","Courier New",monospace,sans-serif;vertical-align:baseline;box-sizing:inherit;width:auto;max-height:600px;overflow:auto;background-color:rgb(239,240,241);display:block;color:rgb(57,51,24);word-wrap:normal;letter-spacing:normal;text-align:left;text-indent:0px;text-transform:none;word-spacing:0px;text-decoration-style:initial;text-decoration-color:initial"><code style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:13px;line-height:inherit;font-family:Consolas,Menlo,Monaco,"Lucida Console","Liberation Mono","DejaVu Sans Mono","Bitstream Vera Sans Mono","Courier New",monospace,sans-serif;vertical-align:baseline;box-sizing:inherit;background-color:rgb(239,240,241);white-space:inherit"><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">></span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)"> sourceCpp</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">(</span><span class="gmail-str" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(125,39,39)">"Hooking-R-in-cpp.cpp"</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">)</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">

</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">></span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)"> set.seed</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">(</span><span class="gmail-lit" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(125,39,39)">20130810</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">)</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">

</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">></span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)"> library</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">(</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">igraph</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">)</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">

</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">></span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)"> adj_mat</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">(</span><span class="gmail-lit" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(125,39,39)">100</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">,</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)"> </span><span class="gmail-lit" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(125,39,39)">0.5</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">)</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">
Error </span><span class="gmail-kwd" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(16,16,148)">in</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)"> adj_mat</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">(</span><span class="gmail-lit" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(125,39,39)">100</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">,</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)"> </span><span class="gmail-lit" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(125,39,39)">0.5</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">)</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)"> </span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">:</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)"> 
  Not compatible with requested type</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">:</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)"> </span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">[</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">type</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">=</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">S4</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">;</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)"> target</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">=</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">double</span><span class="gmail-pun" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">]</span><span class="gmail-pln" style="margin:0px;padding:0px;border:0px;font-style:inherit;font-variant:inherit;font-weight:inherit;font-stretch:inherit;font-size:inherit;line-height:inherit;font-family:inherit;vertical-align:baseline;box-sizing:inherit;color:rgb(48,51,54)">.</span></code></pre><p style="margin:0px 0px 1em;padding:0px;border:0px;font-style:normal;font-variant-ligatures:normal;font-variant-caps:normal;font-variant-numeric:inherit;font-variant-east-asian:inherit;font-weight:400;font-stretch:inherit;font-size:15px;line-height:inherit;font-family:Arial,"Helvetica Neue",Helvetica,sans-serif;vertical-align:baseline;box-sizing:inherit;clear:both;color:rgb(36,39,41);letter-spacing:normal;text-align:left;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px;background-color:rgb(255,255,255);text-decoration-style:initial;text-decoration-color:initial">From the error it looks like I am passing a S4 class to a double? Where is the error?</p>

<br></span></code></pre>

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