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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D">For OS X install instructions see:<br>
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</span><a href="http://www.thecoatlessprofessor.com/programming/rcpp-rcpparmadillo-and-os-x-mavericks-lgfortran-and-lquadmath-error">http://www.thecoatlessprofessor.com/programming/rcpp-rcpparmadillo-and-os-x-mavericks-lgfortran-and-lquadmath-error</a><o:p></o:p></p>
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<p class="MsoNormal"><b><span style="font-size:11.0pt;font-family:"Calibri",sans-serif">From:</span></b><span style="font-size:11.0pt;font-family:"Calibri",sans-serif"> rcpp-devel-bounces@lists.r-forge.r-project.org [mailto:rcpp-devel-bounces@lists.r-forge.r-project.org]
<b>On Behalf Of </b>Yue Li<br>
<b>Sent:</b> Friday, May 08, 2015 11:47 AM<br>
<b>To:</b> rcpp-devel@lists.r-forge.r-project.org<br>
<b>Subject:</b> [Rcpp-devel] build error on a starter package made from RcppArmadillo.package.skeleton<o:p></o:p></span></p>
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<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal">Dear List,<o:p></o:p></p>
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<p class="MsoNormal">I’m new to Rcpp and RcppArmadillo and testing out the skeleton on RcppArmadillo. I have the following error when trying to build it.<o:p></o:p></p>
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<p class="MsoNormal"><o:p> </o:p></p>
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<p class="MsoNormal">I’m using OS 10.10.3 on a Macbook Pro. It seems there is some missing library. Any suggestion would be greatly appreciated.<o:p></o:p></p>
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<p class="MsoNormal"><o:p> </o:p></p>
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<p class="MsoNormal">Thanks much,<o:p></o:p></p>
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<p class="MsoNormal">Yue<o:p></o:p></p>
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<p class="MsoNormal"><o:p> </o:p></p>
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<p class="MsoNormal"><o:p> </o:p></p>
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<p class="MsoNormal">In R:<o:p></o:p></p>
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<p class="MsoNormal">RcppArmadillo.package.skeleton( "armadilloTestpkg" )<o:p></o:p></p>
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<p class="MsoNormal"><o:p> </o:p></p>
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<p class="MsoNormal"><o:p> </o:p></p>
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<p class="MsoNormal">In Unix:<o:p></o:p></p>
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<p class="MsoNormal"><o:p> </o:p></p>
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<p class="MsoNormal" style="background:#F1F1F1"><span style="font-size:10.5pt;font-family:"Bitstream Vera Sans Mono"">~/Desktop> R CMD build armadilloTestpkg<o:p></o:p></span></p>
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<p class="MsoNormal" style="background:#F1F1F1"><span style="font-size:10.5pt;font-family:"Bitstream Vera Sans Mono"">* checking for file ‘armadilloTestpkg/DESCRIPTION’ ... OK<o:p></o:p></span></p>
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<p class="MsoNormal" style="background:#F1F1F1"><span style="font-size:10.5pt;font-family:"Bitstream Vera Sans Mono"">* preparing ‘armadilloTestpkg’:<o:p></o:p></span></p>
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<p class="MsoNormal" style="background:#F1F1F1"><span style="font-size:10.5pt;font-family:"Bitstream Vera Sans Mono"">* checking DESCRIPTION meta-information ... OK<o:p></o:p></span></p>
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<p class="MsoNormal" style="background:#F1F1F1"><span style="font-size:10.5pt;font-family:"Bitstream Vera Sans Mono"">* cleaning src<o:p></o:p></span></p>
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<p class="MsoNormal" style="background:#F1F1F1"><span style="font-size:10.5pt;font-family:"Bitstream Vera Sans Mono"">* installing the package to process help pages<o:p></o:p></span></p>
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<p class="MsoNormal" style="background:#F1F1F1"><span style="font-size:10.5pt;font-family:"Bitstream Vera Sans Mono""> -----------------------------------<o:p></o:p></span></p>
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<p class="MsoNormal" style="background:#F1F1F1"><span style="font-size:10.5pt;font-family:"Bitstream Vera Sans Mono"">* installing *source* package ‘armadilloTestpkg’ ...<o:p></o:p></span></p>
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<p class="MsoNormal" style="background:#F1F1F1"><span style="font-size:10.5pt;font-family:"Bitstream Vera Sans Mono"">** libs<o:p></o:p></span></p>
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<p class="MsoNormal" style="background:#F1F1F1"><span style="font-size:10.5pt;font-family:"Bitstream Vera Sans Mono"">clang++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include
-I"/Library/Frameworks/R.framework/Versions/3.2/Resources/library/Rcpp/include" -I"/Library/Frameworks/R.framework/Versions/3.2/Resources/library/RcppArmadillo/include" -fPIC -Wall -mtune=core2 -g -O2 -c RcppExports.cpp -o RcppExports.o<o:p></o:p></span></p>
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<p class="MsoNormal" style="background:#F1F1F1"><span style="font-size:10.5pt;font-family:"Bitstream Vera Sans Mono"">clang++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include
-I"/Library/Frameworks/R.framework/Versions/3.2/Resources/library/Rcpp/include" -I"/Library/Frameworks/R.framework/Versions/3.2/Resources/library/RcppArmadillo/include" -fPIC -Wall -mtune=core2 -g -O2 -c rcpparma_hello_world.cpp -o rcpparma_hello_world.o<o:p></o:p></span></p>
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<p class="MsoNormal" style="background:#F1F1F1"><span style="font-size:10.5pt;font-family:"Bitstream Vera Sans Mono"">clang++ -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib
-L/usr/local/lib -o armadilloTestpkg.so RcppExports.o rcpparma_hello_world.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/lib/gcc/x86_64-apple-darwin13.0.0/4.8.2 -lgfortran -lquadmath
-lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation<o:p></o:p></span></p>
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<p class="MsoNormal" style="background:#F1F1F1"><span style="font-size:10.5pt;font-family:"Bitstream Vera Sans Mono"">ld: warning: directory not found for option '-L/usr/local/lib/gcc/x86_64-apple-darwin13.0.0/4.8.2'<o:p></o:p></span></p>
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<p class="MsoNormal" style="background:#F1F1F1"><span style="font-size:10.5pt;font-family:"Bitstream Vera Sans Mono"">ld: library not found for -lquadmath<o:p></o:p></span></p>
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<p class="MsoNormal" style="background:#F1F1F1"><span style="font-size:10.5pt;font-family:"Bitstream Vera Sans Mono"">clang: error: linker command failed with exit code 1 (use -v to see invocation)<o:p></o:p></span></p>
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<p class="MsoNormal" style="background:#F1F1F1"><span style="font-size:10.5pt;font-family:"Bitstream Vera Sans Mono"">make: *** [armadilloTestpkg.so] Error 1<o:p></o:p></span></p>
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<p class="MsoNormal" style="background:#F1F1F1"><span style="font-size:10.5pt;font-family:"Bitstream Vera Sans Mono"">ERROR: compilation failed for package ‘armadilloTestpkg’<o:p></o:p></span></p>
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<p class="MsoNormal" style="background:#F1F1F1"><span style="font-size:10.5pt;font-family:"Bitstream Vera Sans Mono"">* removing ‘/private/var/folders/dn/xwnc_tvd4bs6cv_9fdt1cc400000gn/T/RtmpJm6sfM/Rinst9b44f7bf1f3/armadilloTestpkg’<o:p></o:p></span></p>
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<p class="MsoNormal" style="background:#F1F1F1"><span style="font-size:10.5pt;font-family:"Bitstream Vera Sans Mono"">ERROR: package installation failed<o:p></o:p></span></p>
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