Success! The snag was installing both packages from their source packages, not the binary OSX ones. <div><br></div><div>I appreciate your guys time, too bad installation from CRAN didn't "just work". For me there is a lot of potential for this library. I use R for all my data analysis, but I have a set of c++ libraries used for generating the data (my application is protein design), it would be great to fuse the two.</div>
<div><br></div><div>One question, does RInside allow you to load installed packages ( library("RSvgDevice") ) ?</div><div><br></div><div>Thanks again,</div><div>Dan</div><div><br></div><div><br><div class="gmail_quote">
On Tue, Apr 6, 2010 at 9:36 AM, Dirk Eddelbuettel <span dir="ltr"><<a href="mailto:edd@debian.org">edd@debian.org</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex;">
<div class="im"><br>
On 6 April 2010 at 09:22, Dan Kulp wrote:<br>
| Sorry about that, I thought you had figured out the CRAN version numbers....<br>
|<br>
| Rcpp : 0.7.11<br>
| RInside: 0.2.2<br>
|<br>
| I also tried installing the package as you recommend .. doesn't help,<br>
| clearly because I already have 0.7.11<br>
|<br>
| Any more suggestions?<br>
<br>
</div>Not at this point given the somewhat incomplete information you provided.<br>
<br>
See below for a log from my Linux box.<br>
<br>
Dirk<br>
<br>
edd@ron:~/svn/rcpp> R CMD INSTALL pkg/Rcpp_0.7.11.tar.gz<br>
* installing to library ‘/usr/local/lib/R/site-library’<br>
* installing *source* package ‘Rcpp’ ...<br>
** libs<br>
g++ -I/usr/share/R/include -I. -fpic -O3 -Wall -pipe -c Dimension.cpp -o Dimension.o<br>
g++ -I/usr/share/R/include -I. -fpic -O3 -Wall -pipe -c DottedPair.cpp -o DottedPair.o<br>
g++ -I/usr/share/R/include -I. -fpic -O3 -Wall -pipe -c Environment.cpp -o Environment.o<br>
g++ -I/usr/share/R/include -I. -fpic -O3 -Wall -pipe -c Evaluator.cpp -o Evaluator.o<br>
g++ -I/usr/share/R/include -I. -fpic -O3 -Wall -pipe -c Function.cpp -o Function.o<br>
g++ -I/usr/share/R/include -I. -fpic -O3 -Wall -pipe -c Language.cpp -o Language.o<br>
g++ -I/usr/share/R/include -I. -fpic -O3 -Wall -pipe -c Pairlist.cpp -o Pairlist.o<br>
g++ -I/usr/share/R/include -I. -fpic -O3 -Wall -pipe -c Promise.cpp -o Promise.o<br>
g++ -I/usr/share/R/include -I. -fpic -O3 -Wall -pipe -c RObject.cpp -o RObject.o<br>
g++ -I/usr/share/R/include -I. -fpic -O3 -Wall -pipe -c RcppCommon.cpp -o RcppCommon.o<br>
g++ -I/usr/share/R/include -I. -fpic -O3 -Wall -pipe -c RcppDate.cpp -o RcppDate.o<br>
g++ -I/usr/share/R/include -I. -fpic -O3 -Wall -pipe -c RcppDateVector.cpp -o RcppDateVector.o<br>
g++ -I/usr/share/R/include -I. -fpic -O3 -Wall -pipe -c RcppDatetime.cpp -o RcppDatetime.o<br>
g++ -I/usr/share/R/include -I. -fpic -O3 -Wall -pipe -c RcppDatetimeVector.cpp -o RcppDatetimeVector.o<br>
g++ -I/usr/share/R/include -I. -fpic -O3 -Wall -pipe -c RcppFrame.cpp -o RcppFrame.o<br>
g++ -I/usr/share/R/include -I. -fpic -O3 -Wall -pipe -c RcppFunction.cpp -o RcppFunction.o<br>
g++ -I/usr/share/R/include -I. -fpic -O3 -Wall -pipe -c RcppList.cpp -o RcppList.o<br>
g++ -I/usr/share/R/include -I. -fpic -O3 -Wall -pipe -c RcppMatrix.cpp -o RcppMatrix.o<br>
g++ -I/usr/share/R/include -I. -fpic -O3 -Wall -pipe -c RcppMatrixView.cpp -o RcppMatrixView.o<br>
g++ -I/usr/share/R/include -I. -fpic -O3 -Wall -pipe -c RcppNumList.cpp -o RcppNumList.o<br>
g++ -I/usr/share/R/include -I. -fpic -O3 -Wall -pipe -c RcppParams.cpp -o RcppParams.o<br>
g++ -I/usr/share/R/include -I. -fpic -O3 -Wall -pipe -c RcppResultSet.cpp -o RcppResultSet.o<br>
g++ -I/usr/share/R/include -I. -fpic -O3 -Wall -pipe -c RcppStringVector.cpp -o RcppStringVector.o<br>
g++ -I/usr/share/R/include -I. -fpic -O3 -Wall -pipe -c RcppStringVectorView.cpp -o RcppStringVectorView.o<br>
g++ -I/usr/share/R/include -I. -fpic -O3 -Wall -pipe -c RcppVector.cpp -o RcppVector.o<br>
g++ -I/usr/share/R/include -I. -fpic -O3 -Wall -pipe -c RcppVectorView.cpp -o RcppVectorView.o<br>
g++ -I/usr/share/R/include -I. -fpic -O3 -Wall -pipe -c S4.cpp -o S4.o<br>
g++ -I/usr/share/R/include -I. -fpic -O3 -Wall -pipe -c Symbol.cpp -o Symbol.o<br>
g++ -I/usr/share/R/include -I. -fpic -O3 -Wall -pipe -c WeakReference.cpp -o WeakReference.o<br>
g++ -I/usr/share/R/include -I. -fpic -O3 -Wall -pipe -c clone.cpp -o clone.o<br>
g++ -I/usr/share/R/include -I. -fpic -O3 -Wall -pipe -c coerce.cpp -o coerce.o<br>
g++ -I/usr/share/R/include -I. -fpic -O3 -Wall -pipe -c debugging.cpp -o debugging.o<br>
g++ -I/usr/share/R/include -I. -fpic -O3 -Wall -pipe -c exceptions.cpp -o exceptions.o<br>
g++ -I/usr/share/R/include -I. -fpic -O3 -Wall -pipe -c r_cast.cpp -o r_cast.o<br>
g++ -shared -o Rcpp.so Dimension.o DottedPair.o Environment.o Evaluator.o Function.o Language.o Pairlist.o Promise.o RObject.o RcppCommon.o RcppDate.o RcppDateVector.o RcppDatetime.o RcppDatetimeVector.o RcppFrame.o RcppFunction.o RcppList.o RcppMatrix.o RcppMatrixView.o RcppNumList.o RcppParams.o RcppResultSet.o RcppStringVector.o RcppStringVectorView.o RcppVector.o RcppVectorView.o S4.o Symbol.o WeakReference.o clone.o coerce.o debugging.o exceptions.o r_cast.o -L/usr/lib/R/lib -lR<br>
g++ -o libRcpp.so Dimension.o DottedPair.o Environment.o Evaluator.o Function.o Language.o Pairlist.o Promise.o RObject.o RcppCommon.o RcppDate.o RcppDateVector.o RcppDatetime.o RcppDatetimeVector.o RcppFrame.o RcppFunction.o RcppList.o RcppMatrix.o RcppMatrixView.o RcppNumList.o RcppParams.o RcppResultSet.o RcppStringVector.o RcppStringVectorView.o RcppVector.o RcppVectorView.o S4.o Symbol.o WeakReference.o clone.o coerce.o debugging.o exceptions.o r_cast.o -shared -L/usr/lib/R/lib -lR<br>
ar qc libRcpp.a Dimension.o DottedPair.o Environment.o Evaluator.o Function.o Language.o Pairlist.o Promise.o RObject.o RcppCommon.o RcppDate.o RcppDateVector.o RcppDatetime.o RcppDatetimeVector.o RcppFrame.o RcppFunction.o RcppList.o RcppMatrix.o RcppMatrixView.o RcppNumList.o RcppParams.o RcppResultSet.o RcppStringVector.o RcppStringVectorView.o RcppVector.o RcppVectorView.o S4.o Symbol.o WeakReference.o clone.o coerce.o debugging.o exceptions.o r_cast.o<br>
cp libRcpp.so ../inst/lib<br>
cp Rcpp*.h ../inst/lib<br>
cp Rcpp/*.h ../inst/lib/Rcpp<br>
cp Rcpp/internal/*.h ../inst/lib/Rcpp/internal<br>
cp Rcpp/traits/*.h ../inst/lib/Rcpp/traits<br>
cp libRcpp.a ../inst/lib<br>
rm libRcpp.so libRcpp.a<br>
installing to /usr/local/lib/R/site-library/Rcpp/libs<br>
** R<br>
** inst<br>
** preparing package for lazy loading<br>
** help<br>
*** installing help indices<br>
** building package indices ...<br>
** testing if installed package can be loaded<br>
<br>
* DONE (Rcpp)<br>
edd@ron:~/svn/rcpp> R CMD INSTALL ../rinside/RInside_0.2.2.tar.gz<br>
* installing to library ‘/usr/local/lib/R/site-library’<br>
* installing *source* package ‘RInside’ ...<br>
** libs<br>
** arch -<br>
/usr/lib/R/bin/R --vanilla --slave < tools/RInsideEnvVars.r > RInsideEnvVars.h<br>
/usr/lib/R/bin/R --vanilla --slave < tools/RInsideAutoloads.r > RInsideAutoloads.h<br>
g++ -I/usr/share/R/include -Wall -I/usr/share/R/include -I/usr/local/lib/R/site-library/Rcpp/lib -fpic -O3 -Wall -pipe -c MemBuf.cpp -o MemBuf.o<br>
g++ -I/usr/share/R/include -Wall -I/usr/share/R/include -I/usr/local/lib/R/site-library/Rcpp/lib -fpic -O3 -Wall -pipe -c RInside.cpp -o RInside.o<br>
g++ -o libRInside.so MemBuf.o RInside.o -shared -L/usr/lib/R/lib -lR<br>
ar qc libRInside.a MemBuf.o RInside.o<br>
cp libRInside.so ../inst/lib<br>
cp RInside.h MemBuf.h ../inst/lib<br>
cp libRInside.a ../inst/lib<br>
rm libRInside.so libRInside.a<br>
** R<br>
** inst<br>
** preparing package for lazy loading<br>
** help<br>
*** installing help indices<br>
** building package indices ...<br>
** testing if installed package can be loaded<br>
<br>
* DONE (RInside)<br>
edd@ron:~/svn/rcpp> cd ../rinside/pkg/inst/examples/standard/<br>
edd@ron:~/svn/rinside/pkg/inst/examples/standard> rm rinside_sample0; make rinside_sample0<br>
g++ -I/usr/share/R/include -I/usr/local/lib/R/site-library/Rcpp/lib -I/usr/local/lib/R/site-library/RInside/lib -g -O2 -Wall rinside_sample0.cpp -L/usr/lib/R/lib -lR -lblas -llapack -L/usr/local/lib/R/site-library/Rcpp/lib -lRcpp -Wl,-rpath,/usr/local/lib/R/site-library/Rcpp/lib -L/usr/local/lib/R/site-library/RInside/lib -lRInside -Wl,-rpath,/usr/local/lib/R/site-library/RInside/lib -o rinside_sample0<br>
edd@ron:~/svn/rinside/pkg/inst/examples/standard> ./rinside_sample0<br>
Hello, world!<br>
edd@ron:~/svn/rinside/pkg/inst/examples/standard><br>
<font color="#888888"><br>
--<br>
</font><div><div></div><div class="h5"> Registration is open for the 2nd International conference R / Finance 2010<br>
See <a href="http://www.RinFinance.com" target="_blank">http://www.RinFinance.com</a> for details, and see you in Chicago in April!<br>
</div></div></blockquote></div><br><br clear="all"><br>-- <br>Dan Kulp, PhD<br>Postdoctoral Fellow<br>Biosciences Division, B-9<br>Los Alamos National Laboratory<br>Los Alamos,NM 87545<br>
</div>