[Rcpp-devel] Manual Rcpp installation failure

Alain Forget aforget at cmu.edu
Thu Jul 16 23:20:59 CEST 2015


Hi all,

I need to manually download and install Rcpp for R-3.1.2 on CentOS. I downloaded Rcpp from the "Package source" link here:

https://cran.r-project.org/web/packages/Rcpp/index.html

I then unpacked the tar.gz, and ran the following command to install the package, which resulted in the errors below:

$ R CMD INSTALL Rcpp -l  my/R/packages/directory
* installing *source* package 'Rcpp' ...
** package 'Rcpp' successfully unpacked and MD5 sums checked
** libs
Warning: R include directory is empty -- perhaps need to install R-devel.rpm or similar
g++ -m64 -I/usr/include/R -DNDEBUG -I../inst/include/ -I/usr/local/include    -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic  -c Date.cpp -o Date.o
In file included from ../inst/include/RcppCommon.h:29,
                 from ../inst/include/Rcpp.h:27,
                 from Date.cpp:31:
../inst/include/Rcpp/r/headers.h:52:15: error: R.h: No such file or directory
../inst/include/Rcpp/r/headers.h:53:24: error: Rinternals.h: No such file or directory
../inst/include/Rcpp/r/headers.h:54:27: error: R_ext/Complex.h: No such file or directory
../inst/include/Rcpp/r/headers.h:55:25: error: R_ext/Parse.h: No such file or directory
../inst/include/Rcpp/r/headers.h:56:28: error: R_ext/Rdynload.h: No such file or directory
../inst/include/Rcpp/r/headers.h:57:22: error: Rversion.h: No such file or directory
In file included from ../inst/include/Rcpp.h:27,
                 from Date.cpp:31:
../inst/include/RcppCommon.h:67:29: error: R_ext/Callbacks.h: No such file or directory
../inst/include/RcppCommon.h:68:30: error: R_ext/Visibility.h: No such file or directory
../inst/include/RcppCommon.h:71:19: error: Rmath.h: No such file or directory
In file included from ../inst/include/RcppCommon.h:132,
                 from ../inst/include/Rcpp.h:27,
                 from Date.cpp:31:
../inst/include/Rcpp/Interrupt.h:25:34: error: R_ext/GraphicsEngine.h: No such file or directory
In file included from ../inst/include/Rcpp.h:73,
                 from Date.cpp:31:
../inst/include/Rcpp/Rmath.h:134:27: error: missing binary operator before token "("
In file included from ../inst/include/Rcpp.h:27,
                 from Date.cpp:31:
../inst/include/RcppCommon.h:76: error: 'SEXP' does not name a type
../inst/include/RcppCommon.h:83: error: 'SEXP' does not name a type
../inst/include/RcppCommon.h:90: error: variable or field 'Rcpp_ReleaseObject' declared void
../inst/include/RcppCommon.h:90: error: 'SEXP' was not declared in this scope
Date.cpp:1276: error: expected '}' at end of input
make: *** [Date.o] Error 1

I'm guessing there's something basic I am not aware of? Any suggestions or assistance in manually installing Rcpp would be greatly appreciated, since so many other packages depend on Rcpp, so we're rather stuck until this works.

Thank you,
Alain




More information about the Rcpp-devel mailing list