[Rcpp-devel] RcppArmadillo compilation failure

Dirk Eddelbuettel edd at debian.org
Thu Nov 13 14:32:58 CET 2014


On 13 November 2014 at 13:24, Jon Clayden wrote:
| Dear all,
| 
| After recently updating to OS X 10.10, "Yosemite", and recompiling R
| 3.1.2, I'm reinstalling various packages, but running into trouble
| with RcppArmadillo.
| 
| I configured R with
| 
| ./configure --with-blas="-framework Accelerate" --with-lapack
| --enable-memory-profiling --with-system-zlib --without-internal-tzcode
| CC=clang CXX=clang++ OBJC=clang F77=gfortran-4.9 FC=gfortran-4.9
| CFLAGS="-mtune=native -g -O2" CXXFLAGS="-mtune=native -g -O2"
| FFLAGS="-mtune=native -g -O2" FCFLAGS="-mtune=native -g -O2"
| 
| The output from trying to install Rcpp and RcppArmadillo is at the
| bottom of this email.
| 
| My only thought is that it might be an issue with Accelerate on
| Yosemite, but I'm not sure where the "_wrapper_ddot_" symbol is
| expected to be found. Ideas welcome.

Beats me, and it is a first report of the issue.

I do not see wrapper_ddot in either R, Rcpp or RcppArmadillo

  edd at max:~/svn/r-devel$ ag wrapper_ddot
  edd at max:~/svn/r-devel$ cd ~/git/rcpparmadillo
  edd at max:~/git/rcpparmadillo(master)$ ag wrapper_ddot
  edd at max:~/git/rcpparmadillo(master)$ cd ../rcpp
  edd at max:~/git/rcpp(master)$ ag wrapper_ddot
  edd at max:~/git/rcpp(master)$ 

  (ag is a very fast and smart recursive grep; h/t to Kevin)

Maybe try r-sig-mac ?

Dirk

-- 
http://dirk.eddelbuettel.com | @eddelbuettel | edd at debian.org


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