[Rcpp-devel] Rcpp on R 2.12.0 / windows / gcc 4.5
Romain Francois
romain at r-enthusiasts.com
Thu Sep 30 21:46:16 CEST 2010
If I replace unit tests with this simple one:
test.dummy2 <- function(){
fx <- cxxfunction( , 'return R_NilValue ; ', plugin = "Rcpp", verbose =
TRUE )
fx()
}
I get this problem:
Executing test function test.dummy2 ... >> setting environment variables:
PKG_LIBS = C:/Users/romain/svn/rcpp/pkg/Rcpp.Rcheck/Rcpp/lib/x64/libRcpp.a
>> LinkingTo : Rcpp
CLINK_CPPFLAGS = -I"C:/Users/romain/svn/rcpp/pkg/Rcpp.Rcheck/Rcpp/include"
>> Program source :
1 : // includes from the plugin
2 :
3 : #include <Rcpp.h>
4 :
5 :
6 : #ifndef BEGIN_RCPP
7 : #define BEGIN_RCPP
8 : #endif
9 :
10 : #ifndef END_RCPP
11 : #define END_RCPP
12 : #endif
13 :
14 : using namespace Rcpp;
15 :
16 :
17 : // user includes
18 :
19 :
20 : // declaration
21 : extern "C" {
22 : SEXP file652d570b( ) ;
23 : }
24 :
25 : // definition
26 :
27 : SEXP file652d570b( ){
28 : BEGIN_RCPP
29 : return R_NilValue ;
30 : END_RCPP
31 : }
32 :
33 :
Compilation argument:
c:\R\R-212~1.0AL/bin/x64/R CMD SHLIB file652d570b.cpp 2>
file652d570b.cpp.err.txt
g++ -I"c:/R/R-212~1.0AL/include"
-I"C:/Users/romain/svn/rcpp/pkg/Rcpp.Rcheck/Rcpp/include" -O2 -Wall
-c file652d570b.cpp -o file652d570b.o
g++ -shared -s -static-libgcc -o file652d570b.dll tmp.def file652d570b.o
C:/Users/romain/svn/rcpp/pkg/Rcpp.Rcheck/Rcpp/lib/x64/libRcpp.a
-Lc:/R/R-212~1.0AL/bin/i386 -lR
Timing stopped at: 0 0.02 2.41
Error in inDL(x, as.logical(local), as.logical(now), ...) :
unable to load shared object
'C:/Users/romain/AppData/Local/Temp/Rtmp5Bzbzb/file652d570b.dll':
LoadLibrary failure: %1 n’est pas une application Win32 valide.
If I run this from R --arch 64 it works fine:
$ R --arch 64
R version 2.12.0 alpha (2010-09-29 r53067)
Copyright (C) 2010 The R Foundation for Statistical Computing
ISBN 3-900051-07-0
Platform: x86_64-pc-mingw32/x64 (64-bit)
R est un logiciel libre livré sans AUCUNE GARANTIE.
Vous pouvez le redistribuer sous certaines conditions.
Tapez 'license()' ou 'licence()' pour plus de détails.
R est un projet collaboratif avec de nombreux contributeurs.
Tapez 'contributors()' pour plus d'information et
'citation()' pour la façon de le citer dans les publications.
Tapez 'demo()' pour des démonstrations, 'help()' pour l'aide
en ligne ou 'help.start()' pour obtenir l'aide au format HTML.
Tapez 'q()' pour quitter R.
> fx <- cxxfunction( , 'return R_NilValue ; ', plugin = "Rcpp", verbose
= TRUE$
Erreur : impossible de trouver la fonction "cxxfunction"
> fx()
Erreur : impossible de trouver la fonction "fx"
> require( Rcpp )
Le chargement a nécessité le package : Rcpp
> require( inline )
Le chargement a nécessité le package : inline
>
> fx <- cxxfunction( , 'return R_NilValue ; ', plugin = "Rcpp", verbose
= TRUE$
>> setting environment variables:
PKG_LIBS = c:/R/R-2.12.0alpha/library/Rcpp/lib/x64/libRcpp.a
>> LinkingTo : Rcpp
CLINK_CPPFLAGS = -I"c:/R/R-2.12.0alpha/library/Rcpp/include"
>> Program source :
1 : // includes from the plugin
2 :
3 : #include <Rcpp.h>
4 :
5 :
6 : #ifndef BEGIN_RCPP
7 : #define BEGIN_RCPP
8 : #endif
9 :
10 : #ifndef END_RCPP
11 : #define END_RCPP
12 : #endif
13 :
14 : using namespace Rcpp;
15 :
16 :
17 : // user includes
18 :
19 :
20 : // declaration
21 : extern "C" {
22 : SEXP file14357889( ) ;
23 : }
24 :
25 : // definition
26 :
27 : SEXP file14357889( ){
28 : BEGIN_RCPP
29 : return R_NilValue ;
30 : END_RCPP
31 : }
32 :
33 :
Compilation argument:
c:\R\R-2.12.0alpha/bin/x64/R CMD SHLIB file14357889.cpp 2>
file14357889.cpp.err.txt
x86_64-w64-mingw32-g++ -I"c:/R/R-212~1.0AL/include"
-I"c:/R/R-2.12.0alpha/library/Rcpp/include" -O2 -Wall -c fil
e14357889.cpp -o file14357889.o
x86_64-w64-mingw32-g++ -shared -s -static-libgcc -o file14357889.dll
tmp.def file14357889.o c:/R/R-2.12.0alpha/library/R
cpp/lib/x64/libRcpp.a -Lc:/R/R-212~1.0AL/bin/x64 -lR
Not sure what my next move is.
Romain
Le 30/09/10 21:21, Romain Francois a écrit :
> I tried now with the newer R alpha (rev 53067) and I'm afraid I still
> get the same errors.
>
>
> When however I run the tests manually, everything goes fine:
>
>
> $ R --arch 64
> > require( Rcpp )
> > require( inline )
> > require( RUnit )
> # for example
> > runTestFile( "Rcpp/inst/unitTests/runit.sugar.R" )
>
>
> Executing test function test.sugar.abs ... done successfully.
>
>
>
> Executing test function test.sugar.all.equal ... done successfully.
>
>
>
> Executing test function test.sugar.all.greater ... done successfully.
>
>
>
> Executing test function test.sugar.all.greater.or.equal ... done
> successfully.
>
>
>
> Executing test function test.sugar.all.less ... done successfully.
>
>
>
> Executing test function test.sugar.all.less.or.equal ... done successfully.
>
>
>
> Executing test function test.sugar.all.not.equal ... done successfully.
>
>
>
> Executing test function test.sugar.all.one.equal ... done successfully.
>
>
>
> Executing test function test.sugar.all.one.greater ... done successfully.
>
>
>
> Executing test function test.sugar.all.one.greater.or.equal ... done
> successfully.
>
>
>
> Executing test function test.sugar.all.one.less ... done successfully.
>
>
>
> Executing test function test.sugar.all.one.less.or.equal ... done
> successfully.
>
>
>
> Executing test function test.sugar.all.one.not.equal ... done successfully.
>
>
>
> Executing test function test.sugar.any.equal ... done successfully.
>
>
>
> Executing test function test.sugar.any.equal.not ... done successfully.
>
>
>
> Executing test function test.sugar.any.greater ... done successfully.
>
>
>
> Executing test function test.sugar.any.greater.or.equal ... done
> successfully.
>
>
>
> Executing test function test.sugar.any.isna ... done successfully.
>
>
>
> Executing test function test.sugar.any.less ... done successfully.
>
>
>
> Executing test function test.sugar.any.less.or.equal ... done successfully.
>
>
>
> Executing test function test.sugar.any.not.equal ... done successfully.
>
>
>
> Executing test function test.sugar.assignment ... done successfully.
>
>
>
> Executing test function test.sugar.beta ... done successfully.
>
>
>
> Executing test function test.sugar.ceil ... done successfully.
>
>
>
> Executing test function test.sugar.choose ... done successfully.
>
>
>
> Executing test function test.sugar.complex ... done successfully.
>
>
>
> Executing test function test.sugar.constructor ... done successfully.
>
>
>
> Executing test function test.sugar.diag ... done successfully.
>
>
>
> Executing test function test.sugar.diff ... done successfully.
>
>
>
> Executing test function test.sugar.divides ... done successfully.
>
>
>
> Executing test function test.sugar.exp ... done successfully.
>
>
>
> Executing test function test.sugar.floor ... done successfully.
>
>
>
> Executing test function test.sugar.gamma ... done successfully.
>
>
>
> Executing test function test.sugar.head ... done successfully.
>
>
>
> Executing test function test.sugar.ifelse ... done successfully.
>
>
>
> Executing test function test.sugar.isna ... done successfully.
>
>
>
> Executing test function test.sugar.isna.isna ... done successfully.
>
>
>
> Executing test function test.sugar.lapply ... done successfully.
>
>
>
> Executing test function test.sugar.lbeta ... done successfully.
>
>
>
> Executing test function test.sugar.lchoose ... done successfully.
>
>
>
> Executing test function test.sugar.log1p ... done successfully.
>
>
>
> Executing test function test.sugar.matrix.outer ... done successfully.
>
>
>
> Executing test function test.sugar.matrix.row ... done successfully.
>
>
>
> Executing test function test.sugar.minus ... done successfully.
>
>
>
> Executing test function test.sugar.plus ... done successfully.
>
>
>
> Executing test function test.sugar.plus.all ... done successfully.
>
>
>
> Executing test function test.sugar.plus.seqlen ... done successfully.
>
>
>
> Executing test function test.sugar.pmax ... done successfully.
>
>
>
> Executing test function test.sugar.pmax.one ... done successfully.
>
>
>
> Executing test function test.sugar.pmin ... done successfully.
>
>
>
> Executing test function test.sugar.pmin.one ... done successfully.
>
>
>
> Executing test function test.sugar.pow ... done successfully.
>
>
>
> Executing test function test.sugar.psigamma ... done successfully.
>
>
>
> Executing test function test.sugar.Range ... done successfully.
>
>
>
> Executing test function test.sugar.rep ... done successfully.
>
>
>
> Executing test function test.sugar.rev ... done successfully.
>
>
>
> Executing test function test.sugar.sapply ... done successfully.
>
>
>
> Executing test function test.sugar.sapply.list ... done successfully.
>
>
>
> Executing test function test.sugar.sapply.rawfun ... done successfully.
>
>
>
> Executing test function test.sugar.sapply.square ... done successfully.
>
>
>
> Executing test function test.sugar.seqlaong ... done successfully.
>
>
>
> Executing test function test.sugar.seqlen ... done successfully.
>
>
>
> Executing test function test.sugar.sign ... done successfully.
>
>
>
> Executing test function test.sugar.tail ... done successfully.
>
>
>
> Executing test function test.sugar.times ... done successfully.
>
>
>
> Executing test function test.sugar.unary.minus ... done successfully.
>
>
>
> Executing test function test.sugar.wrap ... done successfully.
>
> Number of test functions: 67
> Number of errors: 0
> Number of failures: 0
>
> > .Platform
> $OS.type
> [1] "windows"
>
> $file.sep
> [1] "/"
>
> $dynlib.ext
> [1] ".dll"
>
> $GUI
> [1] "RTerm"
>
> $endian
> [1] "little"
>
> $pkgType
> [1] "win.binary"
>
> $path.sep
> [1] ";"
>
> $r_arch
> [1] "x64"
>
>
> Romain
>
> Le 30/09/10 15:04, Uwe Ligges a écrit :
>>
>>
>> On 30.09.2010 14:17, Romain Francois wrote:
>>> Hmm. This failed on win builder.
>>>
>>>> Dear package maintainer,
>>>>
>>>> this notification has been generated automatically.
>>>> Your package Rcpp_0.8.6.3.tar.gz has been built (if working) and
>>>> checked for Windows.
>>>> Please check the log files and (if working) the binary package at:
>>>> http://win-builder.r-project.org/7zee4m5kHIjB
>>>> The files will be removed after roughly 72 hours.
>>>> Installation time in seconds: 87
>>>> Check time in seconds: 2385
>>>> Check result: ERROR
>>>> R version 2.12.0 alpha (2010-09-27 r53048) (32+64-bit)
>>>
>>> I initially tested it with
>>>
>>> $ Rscript --arch 64 -e "Rcpp:::test()"
>>>
>>> which worked fine.
>>
>> Brian just said he fixed it. Can you try with the very recent svn from
>> minutes (or few hours) ago?
>>
>> Best,
>> Uwe
>>
>>
>>> R CMD check gives me the same failures as win builder... more work
>>> required then :-(
>>>
>>>
>>> Le 30/09/10 13:45, Romain Francois a écrit :
>>>> Hello,
>>>>
>>>> I spent some of my time this morning tweaking Rcpp so that it builds
>>>> and
>>>> checks on the R 2.12.0 alpha (the latest snapshot) on windows with the
>>>> latest Rtools on both archs.
>>>>
>>>> It appears to work fine at the latest svn revision (rev 2259).
>>>>
>>>> I've sent it to the R-devel branch of win builder and posted a tarball
>>>> here: http://addictedtor.free.fr/misc/rcpp/Rcpp_0.8.6.3.tar.gz
>>>> I'd appreciate if other people would also try it, I'm always a bit
>>>> insecure when it comes to windows.
>>>>
>>>> Our aim is to synchronize release of Rcpp 0.8.7 with the release of R
>>>> 2.12.0
>>>>
>>>>
>>>> Issues were:
>>>> - the hello function in the module that is part of the testRcppmodule
>>>> package:
>>>>
>>>> std::string hello() {
>>>> throw std::range_error( "boom" ) ;
>>>> }
>>>>
>>>> This makes windows (or gcc 4.5, or something else) unhappy. This is
>>>> probably an issue with throw declarations, exceptions accross
>>>> translation unites, etc ... as we have seen before. For now, I
>>>> commented
>>>> it out. This is low priority.
>>>>
>>>> - fast indexing, i.e. as provided by the Rcpp::Fast class makes windows
>>>> unhappy, so I am only using Fast on other platforms. See the #ifndef
>>>> WIN32 in the Extractor.h file. This seems like a good enough workaround
>>>> for now. People who want faster indexing on windows are welcome to
>>>> submit a (((tested))) patch. Note that this is possible that the newer
>>>> compiler produces better code, so the need for the Rcpp::Fast trick
>>>> might not be needed at all.
>>>>
>>>> Romain
>
>
--
Romain Francois
Professional R Enthusiast
+33(0) 6 28 91 30 30
http://romainfrancois.blog.free.fr
|- http://bit.ly/cCmbgg : Rcpp 0.8.6
|- http://bit.ly/bzoWrs : Rcpp svn revision 2000
`- http://bit.ly/b8VNE2 : Rcpp at LondonR, oct 5th
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