[Pomp-commits] r966 - pkg pkg/pomp/inst www/vignettes

[noreply at r-forge.r-project.org]

Author: kingaa
Date: 2014-05-24 17:59:19 +0200 (Sat, 24 May 2014)
New Revision: 966

Modified:
   pkg/Makefile
   pkg/pomp/inst/NEWS
   www/vignettes/pomp.pdf
Log:
- finish updating

Modified: pkg/Makefile
===================================================================
--- pkg/Makefile	2014-05-24 15:59:16 UTC (rev 965)
+++ pkg/Makefile	2014-05-24 15:59:19 UTC (rev 966)
@@ -38,14 +38,11 @@
 %.vignettes %.data: export R_LIBS=$(CURDIR)/library
 %.bin %.check %.qcheck %.qqcheck %.xcheck %.crancheck %.upload %.publish %.clean %.install %.win: PKG = $*_$(shell perl -ne 'print $$1 if /Version:\s+(\d+\.\d+-\d+)/;' $*/DESCRIPTION)
 
-../www.vignettes: pomp.install pomp.manual
+pomp.vignettes: pomp.install pomp.manual
 	(cd ../www/vignettes; make)
 	cp pomp.pdf ../www/vignettes
 	$(RCMD) Rdconv -t html pomp/inst/NEWS.Rd -o ../www/content/NEWS.html
 
-%.vignettes: %.install
-	cd $*/vignettes; make 
-
 %.data: %.install
 	cd $*/inst/data-R; make
 

Modified: pkg/pomp/inst/NEWS
===================================================================
--- pkg/pomp/inst/NEWS	2014-05-24 15:59:16 UTC (rev 965)
+++ pkg/pomp/inst/NEWS	2014-05-24 15:59:19 UTC (rev 966)
@@ -1,5 +1,20 @@
 _N_e_w_s _f_o_r _p_a_c_k_a_g_e '_p_o_m_p'
 
+_C_h_a_n_g_e_s _i_n '_p_o_m_p' _v_e_r_s_i_o_n _0._5_1-_1:
+
+        • Package 'coda' is now a dependency of 'pomp'.  This package
+          provides various generic MCMC diagnostics.
+
+        • Features that facilitate multiple PMCMC chains have been
+          added.  There is a 'c' method to combine 'pmcmc' objects into
+          a 'pmcmcList' object.  Running 'conv.rec' on a 'pmcmc' or
+          'pmcmcList' object now produces 'coda' 'mcmc' and 'mcmc.list'
+          objects, respectively.  Diagnostic plots are produced by
+          running 'plot' on such objects.
+
+        • The 'compare.pmcmc' and 'compare.abc' methods have been
+          removed.  They are superceded by these diagnostic plots.
+
 _C_h_a_n_g_e_s _i_n '_p_o_m_p' _v_e_r_s_i_o_n _0._5_0-_9:
 
         • Fix bug in ‘compare.pmcmc’.

Modified: www/vignettes/pomp.pdf
===================================================================
(Binary files differ)