[Phylobase-devl] failed mac build

Ben Bolker bolker at zoo.ufl.edu
Sun Mar 23 23:47:26 CET 2008


   PS -- now that we have this 'fixed' (if not diagnosed)
on all the machines we know of, can we take this up
with the r-forge admins?

Marguerite Butler wrote:
> Hi Everyone,
> 
> We are having build errors on macs still. This has prevented the r-forge mac 
> binaries from being produced, and I get build errors on some of my machines but 
> not others (even with the same OS! Mac OS 10.4.11
> 
> There is probably an error in our config file. Unfortunately, I do not know how 
> to debug the config file. Does anyone have experience at this? Below is the 
> build log from the failed build. 
> 
> After updating my phylobase directory, I cd into it and run the following command:
> 
> 
> R CMD build pkg > buildinfo.txt
> 
> Here is the file buildinfo.txt
> 
> 
> ------------------------------------------------------------------------
> 
> 
> Some additional error messages (that got dumped at the end):
> 
> ...
> cpe-66-8-198-127:~/phylobase marguerite$ R CMD build pkg > buildinfo.txt
> Loading required package: ape
> Loading required package: gee
> Loading required package: nlme
> Loading required package: lattice
> Error in parse(n = -1, file = file) : unexpected input at
> 69: 
> 70: <<
> Calls: <Anonymous> -> code2LazyLoadDB -> sys.source -> parse
> Execution halted
> ERROR: lazy loading failed for package 'phylobase'
> 
> 
> Marguerite
> ____________________________________________
> Marguerite A. Butler
> Department of Zoology
> University of Hawaii
> 2538 McCarthy Mall, Edmondson 259
> Honolulu, HI  96822
> 
> Phone: 808-956-4713
> FAX:   808-956-9812
> Dept: 808-956-8617
> http://www2.hawaii.edu/~mbutler
> http://www.hawaii.edu/zoology/
> 
> 
> 
> ------------------------------------------------------------------------
> 
> _______________________________________________
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