<html><head><meta http-equiv="Content-Type" content="text/html charset=iso-8859-1"></head><body style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space;"><div><div><div>Hi all,</div><div><br></div><div>Thanks Dr. Bruna and Sean by your answers about the CI of lambda. I did this using the objects of IPMpack: sampleVitalRateObj, sampleIPM and sampleIPMOutput.</div><div><br></div><div>Best wishes,</div><div>Iván</div></div><div><br></div><div><div>
<div><font color="#333333" face="tahoma, sans-serif" style="font-size: 13px; background-color: rgb(255, 255, 255); "><b>Iván Alejandro Ortiz Rodríguez</b></font><div style="color: rgb(136, 136, 136); font-family: arial, sans-serif; font-size: 13px; background-color: rgb(255, 255, 255); "><font color="#333333" face="tahoma, sans-serif">Posgrado en Ciencias Biológicas, </font></div><div style="color: rgb(136, 136, 136); font-family: arial, sans-serif; font-size: 13px; background-color: rgb(255, 255, 255); "><font color="#333333" face="tahoma, sans-serif">Lab. de Ecología de Poblaciones y Comunidades Tropicales</font></div><div style="color: rgb(136, 136, 136); font-family: arial, sans-serif; font-size: 13px; background-color: rgb(255, 255, 255); "><font color="#333333" face="tahoma, sans-serif">Centro de Investigaciones en Ecosistemas, UNAM-Campus Morelia</font></div><div style="color: rgb(136, 136, 136); font-family: arial, sans-serif; font-size: 13px; background-color: rgb(255, 255, 255); "><font color="#333333" face="tahoma, sans-serif">Página web: <a href="http://www.oikos.unam.mx/LECT/index.php/miembros/9-perfiles/36-ivan" target="_blank" style="color: rgb(17, 85, 204); ">http://www.oikos.unam.mx/<wbr>LECT/index.php/miembros/9-<wbr>perfiles/36-ivan</a></font></div></div>
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<div><br><div>Inicio del mensaje reenviado:</div><br class="Apple-interchange-newline"><blockquote type="cite"><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px;"><span style="font-family:'Helvetica'; color:rgba(0, 0, 0, 1.0);"><b>De: </b></span><span style="font-family:'Helvetica';"><a href="mailto:ipmpack-users-request@lists.r-forge.r-project.org">ipmpack-users-request@lists.r-forge.r-project.org</a><br></span></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px;"><span style="font-family:'Helvetica'; color:rgba(0, 0, 0, 1.0);"><b>Asunto: </b></span><span style="font-family:'Helvetica';"><b>IPMpack-users Digest, Vol 13, Issue 2</b><br></span></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px;"><span style="font-family:'Helvetica'; color:rgba(0, 0, 0, 1.0);"><b>Fecha: </b></span><span style="font-family:'Helvetica';">8 de octubre de 2014 18:59:28 GMT-5<br></span></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px;"><span style="font-family:'Helvetica'; color:rgba(0, 0, 0, 1.0);"><b>Para: </b></span><span style="font-family:'Helvetica';"><a href="mailto:ipmpack-users@lists.r-forge.r-project.org">ipmpack-users@lists.r-forge.r-project.org</a><br></span></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px;"><span style="font-family:'Helvetica'; color:rgba(0, 0, 0, 1.0);"><b>Responder a: </b></span><span style="font-family:'Helvetica';"><a href="mailto:ipmpack-users@lists.r-forge.r-project.org">ipmpack-users@lists.r-forge.r-project.org</a><br></span></div><br><div>Send IPMpack-users mailing list submissions to<br><span class="Apple-tab-span" style="white-space:pre"> </span><a href="mailto:ipmpack-users@lists.r-forge.r-project.org">ipmpack-users@lists.r-forge.r-project.org</a><br><br>To subscribe or unsubscribe via the World Wide Web, visit<br><span class="Apple-tab-span" style="white-space:pre"> </span>http://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/ipmpack-users<br><br>or, via email, send a message with subject or body 'help' to<br><span class="Apple-tab-span" style="white-space:pre"> </span>ipmpack-users-request@lists.r-forge.r-project.org<br><br>You can reach the person managing the list at<br><span class="Apple-tab-span" style="white-space:pre"> </span>ipmpack-users-owner@lists.r-forge.r-project.org<br><br>When replying, please edit your Subject line so it is more specific<br>than "Re: Contents of IPMpack-users digest..."<br><br><br>Today's Topics:<br><br> 1. Re: IPMpack-users Digest, Vol 13, Issue 1 (Bruna, Emilio M.)<br> 2. Re: IPMpack-users Digest, Vol 13, Issue 1 (Sean McMahon)<br><br><br>----------------------------------------------------------------------<br><br>Message: 1<br>Date: Wed, 8 Oct 2014 23:40:07 +0000<br>From: "Bruna, Emilio M." <embruna@ufl.edu><br>To: "ipmpack-users@r-forge.wu-wien.ac.at"<br><span class="Apple-tab-span" style="white-space:pre"> </span><ipmpack-users@r-forge.wu-wien.ac.at><br>Subject: Re: [Ipmpack-users] IPMpack-users Digest, Vol 13, Issue 1<br>Message-ID: <D05AA530.2F0E6%embruna@ufl.edu><br>Content-Type: text/plain; charset="windows-1252"<br><br>Hi Ivan et al, I created 1000 populations using bootstrapping of the original individual-based data, and then used IPM pack as a function to calculate lambda of each one of these populations. I then used selected the values for upper and lower 95% CI?s using the procedure for bias-corrected confidence intervals In Caswell?s second edition.<br><br>If you need additional help, let me know via email and I can point you in the direction of the code, which will soon be on Github for all to use.<br><br>EB<br>_____________________________________________________<br><br>Emilio M. Bruna | University of Florida<br>Distinguished Teaching Scholar | Professor of Tropical Ecology & Latin American Studies<br>Director, Florida-Brazil Linkage Institute <http://www.floridabrazil.org/> | Editor-in-Chief, Biotropica<http://www.biotropica.org/><br>Phone: (352) 846-0634 Fax: (352) 392-6984 web: www.BrunaLab.org<http://www.brunalab.org/> twitter: @BrunaLab<br><br><br>From: "ipmpack-users-request@r-forge.wu-wien.ac.at<mailto:ipmpack-users-request@r-forge.wu-wien.ac.at>" <ipmpack-users-request@r-forge.wu-wien.ac.at<mailto:ipmpack-users-request@r-forge.wu-wien.ac.at>><br>Reply-To: "ipmpack-users@r-forge.wu-wien.ac.at<mailto:ipmpack-users@r-forge.wu-wien.ac.at>" <ipmpack-users@r-forge.wu-wien.ac.at<mailto:ipmpack-users@r-forge.wu-wien.ac.at>><br>Date: Wednesday, October 8, 2014 at 6:00 AM<br>To: "ipmpack-users@r-forge.wu-wien.ac.at<mailto:ipmpack-users@r-forge.wu-wien.ac.at>" <ipmpack-users@r-forge.wu-wien.ac.at<mailto:ipmpack-users@r-forge.wu-wien.ac.at>><br>Subject: IPMpack-users Digest, Vol 13, Issue 1<br><br>Send IPMpack-users mailing list submissions to<br>ipmpack-users@lists.r-forge.r-project.org<mailto:ipmpack-users@lists.r-forge.r-project.org><br><br>To subscribe or unsubscribe via the World Wide Web, visit<br>http://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/ipmpack-users<br><br>or, via email, send a message with subject or body 'help' to<br>ipmpack-users-request@lists.r-forge.r-project.org<mailto:ipmpack-users-request@lists.r-forge.r-project.org><br><br>You can reach the person managing the list at<br>ipmpack-users-owner@lists.r-forge.r-project.org<mailto:ipmpack-users-owner@lists.r-forge.r-project.org><br><br>When replying, please edit your Subject line so it is more specific<br>than "Re: Contents of IPMpack-users digest..."<br><br><br>Today's Topics:<br><br> 1. CI of ? using IPMpack? (Iv?n Alejandro Ortiz R.)<br><br><br>----------------------------------------------------------------------<br><br>Message: 1<br>Date: Wed, 8 Oct 2014 00:32:05 -0500<br>From: "Iv?n Alejandro Ortiz R." <iortiz@cieco.unam.mx<mailto:iortiz@cieco.unam.mx>><br>To: ipmpack-users@lists.r-forge.r-project.org<mailto:ipmpack-users@lists.r-forge.r-project.org><br>Subject: [Ipmpack-users] CI of ? using IPMpack?<br>Message-ID: <2E9F889A-9407-4081-A933-24871F9E6838@cieco.unam.mx<mailto:2E9F889A-9407-4081-A933-24871F9E6838@cieco.unam.mx>><br>Content-Type: text/plain; charset="utf-8"<br><br>Hi everybody!<br><br><br><br>I hope you're Ok. Someone knows if is possible estimate the confidence intervals of ? using IPMpack?<br><br><br>Best wishes,<br><br><br>Iv?n<br><br><br>Iv?n Alejandro Ortiz Rodr?guez<br>Posgrado en Ciencias Biol?gicas,<br>Lab. de Ecolog?a de Poblaciones y Comunidades Tropicales<br>Centro de Investigaciones en Ecosistemas, UNAM-Campus Morelia<br><br>-------------- next part --------------<br>An HTML attachment was scrubbed...<br>URL: <http://lists.r-forge.r-project.org/pipermail/ipmpack-users/attachments/20141008/121956c7/attachment-0001.html><br><br>------------------------------<br><br>_______________________________________________<br>IPMpack-users mailing list<br>IPMpack-users@lists.r-forge.r-project.org<mailto:IPMpack-users@lists.r-forge.r-project.org><br>http://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/ipmpack-users<br><br><br>End of IPMpack-users Digest, Vol 13, Issue 1<br>********************************************<br><br>-------------- next part --------------<br>An HTML attachment was scrubbed...<br>URL: <http://lists.r-forge.r-project.org/pipermail/ipmpack-users/attachments/20141008/81343f72/attachment-0001.html><br><br>------------------------------<br><br>Message: 2<br>Date: Wed, 8 Oct 2014 19:59:18 -0400<br>From: Sean McMahon <sean.mcmahon73@gmail.com><br>To: "Bruna, Emilio M." <embruna@ufl.edu><br>Cc: Sean McMahon <ipmpack@gmail.com>,<br><span class="Apple-tab-span" style="white-space:pre"> </span>"ipmpack-users@r-forge.wu-wien.ac.at"<br><span class="Apple-tab-span" style="white-space:pre"> </span><ipmpack-users@r-forge.wu-wien.ac.at><br>Subject: Re: [Ipmpack-users] IPMpack-users Digest, Vol 13, Issue 1<br>Message-ID: <08185BD3-B166-45CE-ACE6-25E1FB01C000@gmail.com><br>Content-Type: text/plain; charset="windows-1252"<br><br>Hi all, <br><br>There is also a function called ?sampleIPM()? in the package that is designed to reproduce IPMs from a list of vital rate objects. These would be developed by sampleVitalRateObj and other functions found through the help files. Please let us know if this is what you hoped to achieve. I believe our sample? functions can help with this.<br><br>Best,<br><br>Sean<br><br>IPMpackTeam<br><br><br><br>On Oct 8, 2014, at 7:40 PM, Bruna, Emilio M. <embruna@ufl.edu> wrote:<br><br><blockquote type="cite">Hi Ivan et al, I created 1000 populations using bootstrapping of the original individual-based data, and then used IPM pack as a function to calculate lambda of each one of these populations. I then used selected the values for upper and lower 95% CI?s using the procedure for bias-corrected confidence intervals In Caswell?s second edition.<br><br>If you need additional help, let me know via email and I can point you in the direction of the code, which will soon be on Github for all to use.<br><br>EB<br>_____________________________________________________ <br><br>Emilio M. Bruna | University of Florida<br>Distinguished Teaching Scholar | Professor of Tropical Ecology & Latin American Studies<br>Director, Florida-Brazil Linkage Institute | Editor-in-Chief, Biotropica<br>Phone: (352) 846-0634 Fax: (352) 392-6984 web: www.BrunaLab.org twitter: @BrunaLab<br><br><br>From: "ipmpack-users-request@r-forge.wu-wien.ac.at" <ipmpack-users-request@r-forge.wu-wien.ac.at><br>Reply-To: "ipmpack-users@r-forge.wu-wien.ac.at" <ipmpack-users@r-forge.wu-wien.ac.at><br>Date: Wednesday, October 8, 2014 at 6:00 AM<br>To: "ipmpack-users@r-forge.wu-wien.ac.at" <ipmpack-users@r-forge.wu-wien.ac.at><br>Subject: IPMpack-users Digest, Vol 13, Issue 1<br><br>Send IPMpack-users mailing list submissions to<br>ipmpack-users@lists.r-forge.r-project.org<br><br>To subscribe or unsubscribe via the World Wide Web, visit<br>http://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/ipmpack-users<br><br>or, via email, send a message with subject or body 'help' to<br>ipmpack-users-request@lists.r-forge.r-project.org<br><br>You can reach the person managing the list at<br>ipmpack-users-owner@lists.r-forge.r-project.org<br><br>When replying, please edit your Subject line so it is more specific<br>than "Re: Contents of IPMpack-users digest..."<br><br><br>Today's Topics:<br><br> 1. CI of ? using IPMpack? (Iv?n Alejandro Ortiz R.)<br><br><br>----------------------------------------------------------------------<br><br>Message: 1<br>Date: Wed, 8 Oct 2014 00:32:05 -0500<br>From: "Iv?n Alejandro Ortiz R." <iortiz@cieco.unam.mx><br>To: ipmpack-users@lists.r-forge.r-project.org<br>Subject: [Ipmpack-users] CI of ? using IPMpack?<br>Message-ID: <2E9F889A-9407-4081-A933-24871F9E6838@cieco.unam.mx><br>Content-Type: text/plain; charset="utf-8"<br><br>Hi everybody!<br><br><br><br>I hope you're Ok. Someone knows if is possible estimate the confidence intervals of ? using IPMpack?<br><br><br>Best wishes,<br><br><br>Iv?n<br><br><br>Iv?n Alejandro Ortiz Rodr?guez<br>Posgrado en Ciencias Biol?gicas,<br>Lab. de Ecolog?a de Poblaciones y Comunidades Tropicales<br>Centro de Investigaciones en Ecosistemas, UNAM-Campus Morelia<br><br>-------------- next part --------------<br>An HTML attachment was scrubbed...<br>URL: <http://lists.r-forge.r-project.org/pipermail/ipmpack-users/attachments/20141008/121956c7/attachment-0001.html><br><br>------------------------------<br><br>_______________________________________________<br>IPMpack-users mailing list<br>IPMpack-users@lists.r-forge.r-project.org<br>http://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/ipmpack-users<br><br><br>End of IPMpack-users Digest, Vol 13, Issue 1<br>********************************************<br><br>_______________________________________________<br>IPMpack-users mailing list<br>IPMpack-users@lists.r-forge.r-project.org<br>http://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/ipmpack-users<br></blockquote><br>-------------- next part --------------<br>An HTML attachment was scrubbed...<br>URL: <http://lists.r-forge.r-project.org/pipermail/ipmpack-users/attachments/20141008/897418f6/attachment.html><br><br>------------------------------<br><br>_______________________________________________<br>IPMpack-users mailing list<br>IPMpack-users@lists.r-forge.r-project.org<br>http://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/ipmpack-users<br><br><br>End of IPMpack-users Digest, Vol 13, Issue 2<br>********************************************<br></div></blockquote></div><br></div></div></body></html>