[Ipmpack-users] How do you represent a P kernel on a log scale?

Karina Scavo kscavo at bu.edu
Tue May 23 20:45:43 CEST 2017


Hi all,

I have created a P matrix that when plotted, looks similar to Figure 3.8 in
the appendix of the paper, "Advancing population ecology with integral
projection models: a practical guide" by Merow et al 2014 (see attached).
The information in the appendix says it would be best to represent this
kernel on a log scale.

How do you transform this kernel on a log scale? Do you do it at the stage
of making the P matrix (in makeIPMPmatrix) or at when making the growth and
survival objects?

Any help would be appreciated!

Best,

Karina
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