<div dir="ltr"><div class="gmail_quote"><div dir="ltr" class="gmail_attr"><br></div><br><div dir="ltr">Hi, <div><br></div><div>I am using genoplotR to plot arrow comparisons for four genomes. One is type strain complete sequence and the other 3 are draft genomes, therefore, they are in contigs. The genes of interest reside in different contigs in my draft genomes. Here is an example for one of the genomes below. As you can see some genes are overlapping positions if we dont consider the contigs. Can you help me how to add contigs into my figures? I have also attached a comparison map to the type strain. Thank you for your help, <br><br><table border="0" cellpadding="0" cellspacing="0" width="348" style="border-collapse:collapse;width:260pt">
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<td width="87" style="width:65pt;font-size:11pt;font-family:Arial,sans-serif;padding-top:1px;padding-right:1px;padding-left:1px;color:black;vertical-align:bottom;border:none;white-space:nowrap"></td>
<td width="87" style="width:65pt;font-size:11pt;font-family:Arial,sans-serif;padding-top:1px;padding-right:1px;padding-left:1px;color:black;vertical-align:bottom;border:none;white-space:nowrap"></td>
<td width="87" style="width:65pt;font-size:11pt;font-family:Arial,sans-serif;padding-top:1px;padding-right:1px;padding-left:1px;color:black;vertical-align:bottom;border:none;white-space:nowrap"></td>
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<td height="19" style="height:14pt;font-size:11pt;font-family:Arial,sans-serif;padding-top:1px;padding-right:1px;padding-left:1px;color:black;vertical-align:bottom;border:none;white-space:nowrap">start</td>
<td style="font-size:11pt;font-family:Arial,sans-serif;padding-top:1px;padding-right:1px;padding-left:1px;color:black;vertical-align:bottom;border:none;white-space:nowrap">end</td>
<td style="font-size:11pt;font-family:Arial,sans-serif;padding-top:1px;padding-right:1px;padding-left:1px;color:black;vertical-align:bottom;border:none;white-space:nowrap">position</td>
<td style="font-size:11pt;font-family:Arial,sans-serif;padding-top:1px;padding-right:1px;padding-left:1px;color:black;vertical-align:bottom;border:none;white-space:nowrap">contig </td>
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<td height="19" align="right" style="height:14pt;font-size:11pt;font-family:Arial,sans-serif;padding-top:1px;padding-right:1px;padding-left:1px;color:black;vertical-align:bottom;border:none;white-space:nowrap">977</td>
<td align="right" style="font-size:11pt;font-family:Arial,sans-serif;padding-top:1px;padding-right:1px;padding-left:1px;color:black;vertical-align:bottom;border:none;white-space:nowrap">1999</td>
<td style="font-size:11pt;font-family:Arial,sans-serif;padding-top:1px;padding-right:1px;padding-left:1px;color:black;vertical-align:bottom;border:none;white-space:nowrap">+</td>
<td align="right" style="font-size:11pt;font-family:Arial,sans-serif;padding-top:1px;padding-right:1px;padding-left:1px;color:black;vertical-align:bottom;border:none;white-space:nowrap">37</td>
</tr>
<tr height="19" style="height:14pt">
<td height="19" align="right" style="height:14pt;font-size:11pt;font-family:Arial,sans-serif;padding-top:1px;padding-right:1px;padding-left:1px;color:black;vertical-align:bottom;border:none;white-space:nowrap">3</td>
<td align="right" style="font-size:11pt;font-family:Arial,sans-serif;padding-top:1px;padding-right:1px;padding-left:1px;color:black;vertical-align:bottom;border:none;white-space:nowrap">908</td>
<td style="font-size:11pt;font-family:Arial,sans-serif;padding-top:1px;padding-right:1px;padding-left:1px;color:black;vertical-align:bottom;border:none;white-space:nowrap">+</td>
<td align="right" style="font-size:11pt;font-family:Arial,sans-serif;padding-top:1px;padding-right:1px;padding-left:1px;color:black;vertical-align:bottom;border:none;white-space:nowrap">37</td>
</tr>
<tr height="19" style="height:14pt">
<td height="19" align="right" style="height:14pt;font-size:11pt;font-family:Arial,sans-serif;padding-top:1px;padding-right:1px;padding-left:1px;color:black;vertical-align:bottom;border:none;white-space:nowrap">5743</td>
<td align="right" style="font-size:11pt;font-family:Arial,sans-serif;padding-top:1px;padding-right:1px;padding-left:1px;color:black;vertical-align:bottom;border:none;white-space:nowrap">6337</td>
<td style="font-size:11pt;font-family:Arial,sans-serif;padding-top:1px;padding-right:1px;padding-left:1px;color:black;vertical-align:bottom;border:none;white-space:nowrap">+</td>
<td align="right" style="font-size:11pt;font-family:Arial,sans-serif;padding-top:1px;padding-right:1px;padding-left:1px;color:black;vertical-align:bottom;border:none;white-space:nowrap">32</td>
</tr>
<tr height="19" style="height:14pt">
<td height="19" align="right" style="height:14pt;font-size:11pt;font-family:Arial,sans-serif;padding-top:1px;padding-right:1px;padding-left:1px;color:black;vertical-align:bottom;border:none;white-space:nowrap">4614</td>
<td align="right" style="font-size:11pt;font-family:Arial,sans-serif;padding-top:1px;padding-right:1px;padding-left:1px;color:black;vertical-align:bottom;border:none;white-space:nowrap">5693</td>
<td style="font-size:11pt;font-family:Arial,sans-serif;padding-top:1px;padding-right:1px;padding-left:1px;color:black;vertical-align:bottom;border:none;white-space:nowrap">+</td>
<td align="right" style="font-size:11pt;font-family:Arial,sans-serif;padding-top:1px;padding-right:1px;padding-left:1px;color:black;vertical-align:bottom;border:none;white-space:nowrap">32</td>
</tr>
<tr height="21" style="height:16pt">
<td height="21" align="right" style="height:16pt;font-size:11pt;font-family:Arial,sans-serif;padding-top:1px;padding-right:1px;padding-left:1px;color:black;vertical-align:bottom;border:none;white-space:nowrap">2332</td>
<td align="right" style="font-size:11pt;font-family:Arial,sans-serif;padding-top:1px;padding-right:1px;padding-left:1px;color:black;vertical-align:bottom;border:none;white-space:nowrap">4587</td>
<td style="font-size:11pt;font-family:Arial,sans-serif;padding-top:1px;padding-right:1px;padding-left:1px;color:black;vertical-align:bottom;border:none;white-space:nowrap">+</td>
<td align="right" style="font-size:11pt;font-family:Arial,sans-serif;padding-top:1px;padding-right:1px;padding-left:1px;color:black;vertical-align:bottom;border:none;white-space:nowrap">32</td>
</tr>
<tr height="19" style="height:14pt">
<td height="19" align="right" style="height:14pt;font-size:11pt;font-family:Arial,sans-serif;padding-top:1px;padding-right:1px;padding-left:1px;color:black;vertical-align:bottom;border:none;white-space:nowrap">1162</td>
<td align="right" style="font-size:11pt;font-family:Arial,sans-serif;padding-top:1px;padding-right:1px;padding-left:1px;color:black;vertical-align:bottom;border:none;white-space:nowrap">2112</td>
<td style="font-size:11pt;font-family:Arial,sans-serif;padding-top:1px;padding-right:1px;padding-left:1px;color:black;vertical-align:bottom;border:none;white-space:nowrap">+</td>
<td align="right" style="font-size:11pt;font-family:Arial,sans-serif;padding-top:1px;padding-right:1px;padding-left:1px;color:black;vertical-align:bottom;border:none;white-space:nowrap">32</td>
</tr>
<tr height="19" style="height:14pt">
<td height="19" align="right" style="height:14pt;font-size:11pt;font-family:Arial,sans-serif;padding-top:1px;padding-right:1px;padding-left:1px;color:black;vertical-align:bottom;border:none;white-space:nowrap">191</td>
<td align="right" style="font-size:11pt;font-family:Arial,sans-serif;padding-top:1px;padding-right:1px;padding-left:1px;color:black;vertical-align:bottom;border:none;white-space:nowrap">1162</td>
<td style="font-size:11pt;font-family:Arial,sans-serif;padding-top:1px;padding-right:1px;padding-left:1px;color:black;vertical-align:bottom;border:none;white-space:nowrap">+</td>
<td align="right" style="font-size:11pt;font-family:Arial,sans-serif;padding-top:1px;padding-right:1px;padding-left:1px;color:black;vertical-align:bottom;border:none;white-space:nowrap">32</td>
</tr>
<tr height="19" style="height:14pt">
<td height="19" align="right" style="height:14pt;font-size:11pt;font-family:Arial,sans-serif;padding-top:1px;padding-right:1px;padding-left:1px;color:black;vertical-align:bottom;border:none;white-space:nowrap">441</td>
<td align="right" style="font-size:11pt;font-family:Arial,sans-serif;padding-top:1px;padding-right:1px;padding-left:1px;color:black;vertical-align:bottom;border:none;white-space:nowrap">1757</td>
<td style="font-size:11pt;font-family:Arial,sans-serif;padding-top:1px;padding-right:1px;padding-left:1px;color:black;vertical-align:bottom;border:none;white-space:nowrap">+</td>
<td align="right" style="font-size:11pt;font-family:Arial,sans-serif;padding-top:1px;padding-right:1px;padding-left:1px;color:black;vertical-align:bottom;border:none;white-space:nowrap">311</td>
</tr>
</tbody></table><div><div dir="ltr" data-smartmail="gmail_signature"><div dir="ltr"><div dir="ltr"><div dir="ltr"><div dir="ltr">Ezgi Özcan<div><br></div><div></div><span style="color:rgb(0,0,0);font-family:Helvetica"><br></span></div></div></div></div></div></div></div></div>
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