
<html><head><meta http-equiv="content-type" content="text/html; charset=utf-8"></head><body dir="auto"><div>In principle I agree this is good idea, rarely "no" (default) option is used; but I am always worried to change defaults as this may destroy people pipelines. </div>

<div><br></div><div>We need third opinion :)</div><div><br></div><div>Best,</div><div>Y<br><br><div>----------------------</div>Yurii Aulchenko <div>(sent from mobile device)</div></div><div><br>On Feb 28, 2014, at 3:45 PM, Xia Shen <<a href="mailto:shenxia911@gmail.com">shenxia911@gmail.com</a>> wrote:<br>

<br></div><blockquote type="cite"><div><meta http-equiv="Content-Type" content="text/html charset=windows-1252">Hi,<div><br></div><div>I suggest to change the default weight argument in the GenABEL/ibs() function to be set to “freq” instead of “no”. I have colleagues constantly forget to set to “freq” and produce, what I would call, “wrong” kinship matrix.</div>

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<div style="margin:0px"><div style="margin:0px"><span style="letter-spacing:0px"><b>Xia Shen</b></span></div><div style="margin:0px"><span style="letter-spacing:0px">PhD</span></div><div style="margin:0px;min-height:11px">

<span style="letter-spacing:0px"></span><br></div><div style="margin:0px"><span style="letter-spacing:0px">Division of Computational Genetics</span></div><div style="margin:0px"><span style="letter-spacing:0px">Department of Clinical Science</span></div>

<div style="margin:0px"><span style="letter-spacing:0px"><b>Swedish University of Agricultural Sciences</b></span></div><div style="margin:0px"><span style="letter-spacing:0px">Uppsala, Sweden</span></div><div style="margin:0px;color:rgb(2,30,170);min-height:11px">

<span style="letter-spacing:0px"></span><br></div><div style="margin:0px"><span style="text-decoration:underline;letter-spacing:0px"><a href="http://www.shen.se">www.shen.se</a></span></div></div><div style="margin:0px;min-height:11px">

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