This is really peculiar - packages passing cran checks are usually well - installable. I do not have a slightest idea what might be we wrong and how to check that. Did anybody experience similar problem?<br><br>Yurii<br><br>
On Tuesday, January 3, 2012, L.C. Karssen <<a href="mailto:l.karssen@erasmusmc.nl">l.karssen@erasmusmc.nl</a>> wrote:<br>> Dear list,<br>><br>> Some extra info on the problem: Today GenABEL v1.7-0 loads without<br>
> problems...<br>> I guess the problem lies somewhere in zzz.R that checks the version<br>> numbers. Maybe one or both servers mentioned in the code had a time-out<br>> or returned garbage.<br>> Obviously we should monitor this kind of behaviour. A failing version<br>
> check should not inhibit use of GenABEL.<br>><br>><br>> Lennart.<br>><br>> On 02-01-12 14:26, L.C. Karssen wrote:<br>>> Dear List,<br>>><br>>> I've run into something peculiar with GenABEL 1.7-0. Some time ago I<br>
>> installed it without problems on one of our servers. Today, when we load<br>>> the package we get the following error:<br>>><br>>>> library(GenABEL)<br>>> Loading required package: MASS<br>
>> Error : .onLoad failed in loadNamespace() for 'GenABEL', details:<br>>> call: stringSplit[[1]]<br>>> error: subscript out of bounds<br>>> Error: package/namespace load failed for ‘GenABEL’<br>
>><br>>> This is on Ubuntu Linux 10.04, x64, R 2.14.1.<br>>><br>>> While looking into this today, I tried to install GenABEL from CRAN on<br>>> another server (CentOS Linux, x64, R 2.13.1) and on my workstation<br>
>> (Ubuntu Linux 11.11, x64, R 2.14.1). Both failed:<br>>><br>>> ** testing if installed package can be loaded<br>>> Error : .onLoad failed in loadNamespace() for 'GenABEL', details:<br>>> call: stringSplit[[1]]<br>
>> error: subscript out of bounds<br>>> Error: loading failed<br>>> Execution halted<br>>> ERROR: loading failed<br>>> * removing ‘/home/lennart/Programmeren/R/lib/GenABEL’<br>>><br>>> The downloaded packages are in<br>
>> ‘/tmp/RtmpraRfqM/downloaded_packages’<br>>> Warning message:<br>>> In install.packages("GenABEL") :<br>>> installation of package ‘GenABEL’ had non-zero exit status<br>>><br>
>><br>>> Any idea what is going on here? Has anyone else seen this behaviour?<br>>><br>>><br>>><br>>> Lennart.<br>>><br>>><br>>> On 23-12-11 12:06, GenABEL project wrote:<br>
>>> FYI<br>>>><br>>>> ---------- Forwarded message ----------<br>>>> From: ** <<a href="mailto:Uwe.Ligges@r-project.org">Uwe.Ligges@r-project.org</a> <mailto:<a href="mailto:Uwe.Ligges@r-project.org">Uwe.Ligges@r-project.org</a>>><br>
>>> Date: Thu, Dec 22, 2011 at 1:52 AM<br>>>> Subject: Package GenABEL_1.7-0.tar.gz has been built for Windows<br>>>> To: <a href="mailto:genabel.project@gmail.com">genabel.project@gmail.com</a> <mailto:<a href="mailto:genabel.project@gmail.com">genabel.project@gmail.com</a>><br>
>>> Cc: <a href="mailto:Uwe.Ligges@r-project.org">Uwe.Ligges@r-project.org</a> <mailto:<a href="mailto:Uwe.Ligges@r-project.org">Uwe.Ligges@r-project.org</a>>,<br>>>> <a href="mailto:olafm@kimberly.tako.de">olafm@kimberly.tako.de</a> <mailto:<a href="mailto:olafm@kimberly.tako.de">olafm@kimberly.tako.de</a>><br>
>>><br>>>><br>>>> Dear package maintainer,<br>>>><br>>>> this notification has been generated automatically.<br>>>> Your package GenABEL_1.7-0.tar.gz has been built for Windows and<br>
>>> will be published within 24 hours in the corresponding CRAN directory<br>>>> (CRAN/bin/windows/contrib/2.14/).<br>>>> R version 2.14.1 RC (2011-12-19 r57939)<br>>>><br>>>> All the best,<br>
>>> Uwe Ligges<br>>>> (Maintainer of binary packages for Windows)<br>>>><br>>>><br>>>><br>>>><br>>>> _______________________________________________<br>>>> genabel-devel mailing list<br>
>>> <a href="mailto:genabel-devel@lists.r-forge.r-project.org">genabel-devel@lists.r-forge.r-project.org</a><br>>>> <a href="https://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/genabel-devel">https://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/genabel-devel</a><br>
>><br>>><br>>><br>>> _______________________________________________<br>>> genabel-devel mailing list<br>>> <a href="mailto:genabel-devel@lists.r-forge.r-project.org">genabel-devel@lists.r-forge.r-project.org</a><br>
>> <a href="https://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/genabel-devel">https://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/genabel-devel</a><br>><br>> --<br>> -----------------------------------------------<br>
> L.C. Karssen<br>> Erasmus MC<br>> Department of Epidemiology<br>> Room Ee-2224<br>><br>> Postbus 2040<br>> 3000 CA Rotterdam<br>> The Netherlands<br>><br>> phone: +31-10-7044217<br>> fax: +31-10-7044657<br>
> e-mail: <a href="mailto:l.karssen@erasmusmc.nl">l.karssen@erasmusmc.nl</a><br>> GPG key ID: 0E1D39E3<br>> ----------------------------