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<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Verdana",sans-serif">Dear all,<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Verdana",sans-serif"><o:p> </o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Verdana",sans-serif">I don’t manage to get Flasher installed on R3.3.3. I do have an up-to-date gcc compiler, but something goes wrong. Any suggestions? Full error message below.<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Verdana",sans-serif"><o:p> </o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Verdana",sans-serif">Thanks,<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Verdana",sans-serif"><o:p> </o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Verdana",sans-serif">Niels<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Verdana",sans-serif"><o:p> </o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Verdana",sans-serif"><o:p> </o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Verdana",sans-serif"><o:p> </o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Verdana",sans-serif">* installing *source* package 'FLasher' ...<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Verdana",sans-serif">** libs<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Verdana",sans-serif"><o:p> </o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Verdana",sans-serif">*** arch - i386<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Verdana",sans-serif">c:/Rtools/mingw_32/bin/g++ -std=c++0x -I"C:/PROGRA~1/R/R-33~1.3/include" -DNDEBUG -I"C:/Program Files/R/R-3.3.3/library/Rcpp/include" -I"d:/Compiler/gcc-4.9.3/local330/include"
-I../inst/include -O2 -Wall -mtune=core2 -c FLCatch.cpp -o FLCatch.o<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Verdana",sans-serif">In file included from ../inst/include/cppad/local/recorder.hpp:15:0,<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Verdana",sans-serif"> from ../inst/include/cppad/core/ad.hpp:21,<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Verdana",sans-serif"> from ../inst/include/cppad/cppad.hpp:55,<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Verdana",sans-serif"> from ../inst/include/FLQuant_base.h:7,<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Verdana",sans-serif"> from ../inst/include/FLCatch.h:10,<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Verdana",sans-serif"> from FLCatch.cpp:6:<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Verdana",sans-serif">../inst/include/cppad/local/pod_vector.hpp:58:25: error: redefinition of 'bool CppAD::local::is_pod() [with Type = unsigned int]'<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Verdana",sans-serif">template <> inline bool is_pod<size_t>(void) { return true; }<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Verdana",sans-serif"> ^<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Verdana",sans-serif">../inst/include/cppad/local/pod_vector.hpp:56:25: note: 'bool CppAD::local::is_pod() [with Type = unsigned int]' previously declared here<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Verdana",sans-serif">template <> inline bool is_pod<unsigned int>(void) { return true; }<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Verdana",sans-serif"> ^<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Verdana",sans-serif">make: *** [FLCatch.o] Error 1<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Verdana",sans-serif">Warning: running command 'make -f "Makevars.win" -f "C:/PROGRA~1/R/R-33~1.3/etc/i386/Makeconf" -f "C:/PROGRA~1/R/R-33~1.3/share/make/winshlib.mk" CXX='$(CXX1X) $(CXX1XSTD)'
CXXFLAGS='$(CXX1XFLAGS)' CXXPICFLAGS='$(CXX1XPICFLAGS)' SHLIB_LDFLAGS='$(SHLIB_CXX1XLDFLAGS)' SHLIB_LD='$(SHLIB_CXX1XLD)' SHLIB="FLasher.dll" OBJECTS="FLCatch.o FLFishery.o FLQuant_base.o FLQuant_multidim.o FLStock.o RcppExports.o fwdBiol.o fwdControl.o fwdSR.o
operating_model.o solver.o tests_FLCatch.o tests_FLFishery.o tests_FLQuant.o tests_FLQuantAD.o tests_FLQuant_multidim.o tests_FLStock.o tests_arithmetic_operators.o tests_fwdBiol.o tests_fwdControl.o tests_fwdSR.o tests_operatingModel.o tests_profiling.o tests_solver.o"'
had status 2<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Verdana",sans-serif">ERROR: compilation failed for package 'FLasher'<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Verdana",sans-serif">* removing 'C:/Program Files/R/R-3.3.3/library/FLasher'<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Verdana",sans-serif"><o:p> </o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Verdana",sans-serif">The downloaded source packages are in<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Verdana",sans-serif"> ‘C:\Users\hintz001\AppData\Local\Temp\Rtmp6dzPgy\downloaded_packages’<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Verdana",sans-serif">Warning messages:<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Verdana",sans-serif">1: running command '"C:/PROGRA~1/R/R-33~1.3/bin/x64/R" CMD INSTALL -l "C:\Program Files\R\R-3.3.3\library" C:\Users\hintz001\AppData\Local\Temp\Rtmp6dzPgy/downloaded_packages/FLasher_0.0.3.tar.gz'
had status 1 <o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Verdana",sans-serif">2: In install.packages(pkgs, repos = "http://flr-project.org/R") :<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Verdana",sans-serif"> installation of package ‘FLasher’ had non-zero exit status<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Verdana",sans-serif">><o:p> </o:p></span></p>
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