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Hi Piera,<br>
<br>
Sorry for the late reply. I was away last week. Usually that error
is related with FLIndices and FLStocks that are not fully
compatible. Can you send me those objects ?<br>
<br>
Best<br>
<br>
EJ<br>
<br>
<div class="moz-cite-prefix">On 13/02/16 16:59, Piera Carpi wrote:<br>
</div>
<blockquote
cite="mid:C0F34CFA-2982-49A6-97B2-83CEF269E7E4@an.ismar.cnr.it"
type="cite">
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Dear all,
<div class=""><br class="">
</div>
<div class="">I’m experimenting an issue with the function
“simulate” for a4a. </div>
<div class=""><br class="">
</div>
<div class="">Whenever I try to use it on windows, it gives me the
following error: </div>
<div class=""><br class="">
</div>
<div class=""><span class="Apple-tab-span" style="white-space:pre"> </span><b
class="">Error in X %*% b : non-conformable arguments</b></div>
<div class="">
<div class=""><br class="">
</div>
<div class="">Here is the code: </div>
<div class=""><br class="">
</div>
<div class="">#########</div>
<div class=""><span class="Apple-tab-span" style="white-space:pre"> </span>> fit
<- sca(stock = stk, srmodel=rmodel, fmodel = fmod,
qmodel=qmod, indices = ids, fit = "assessment")</div>
<div class=""><span class="Apple-tab-span" style="white-space:pre"> </span>> stks
<- stk + simulate(fit, 1000)</div>
</div>
<div class=""><span class="Apple-tab-span" style="white-space:pre"> </span>Error
in X %*% b : non-conformable arguments</div>
<div class=""><span class="Apple-tab-span" style="white-space:pre"> </span></div>
<div class=""><span class="Apple-tab-span" style="white-space:pre"> </span>> summary(fit)</div>
<div class=""><br class="">
</div>
<div class=""><span class="Apple-tab-span" style="white-space:pre"> </span>"An
object of class "a4aFitSA"</div>
<div class=""><br class="">
</div>
<div class=""><span class="Apple-tab-span" style="white-space:pre"> </span>Name:
MySTK </div>
<div class=""><span class="Apple-tab-span" style="white-space:pre"> </span>Description:
Imported from a VPA file. (
~/Assessment_2015/Data/AllData/stk//stk7514.ndx ). Thu Nov 26
15:20:03 2015 + FLSAM: stk_7514 </div>
<div class=""><span class="Apple-tab-span" style="white-space:pre"> </span>Range:
min max pgroup minyear maxyear minfbar maxfbar </div>
<div class=""><span class="Apple-tab-span" style="white-space:pre"> </span> 0
4 4 1975 2014 1 2 </div>
<div class=""><span class="Apple-tab-span" style="white-space:pre"> </span>Quant:
age </div>
<div class=""><br class="">
</div>
<div class=""><span class="Apple-tab-span" style="white-space:pre"> </span>stock.n
: [ 5 40 1 1 1 1 ], units = NA </div>
<div class=""><span class="Apple-tab-span" style="white-space:pre"> </span>harvest
: [ 5 40 1 1 1 1 ], units = f </div>
<div class=""><span class="Apple-tab-span" style="white-space:pre"> </span>catch.n
: [ 5 40 1 1 1 1 ], units = NA"</div>
<div class=""><br class="">
</div>
<div class=""><br class="">
</div>
<div class="">#########</div>
<div class="">Session Info: </div>
<div class="">
<div class="">> sessionInfo()</div>
<div class="">R version 3.2.3 (2015-12-10)</div>
<div class="">Platform: i386-w64-mingw32/i386 (32-bit)</div>
<div class="">Running under: Windows 7 x64 (build 7601) Service
Pack 1</div>
<div class=""><br class="">
</div>
<div class="">locale:</div>
<div class="">[1] LC_COLLATE=English_United Kingdom.1252
LC_CTYPE=English_United Kingdom.1252 </div>
<div class="">[3] LC_MONETARY=English_United Kingdom.1252
LC_NUMERIC=C </div>
<div class="">[5] LC_TIME=English_United Kingdom.1252 </div>
<div class=""><br class="">
</div>
<div class="">attached base packages:</div>
<div class="">[1] stats graphics grDevices utils
datasets methods base </div>
<div class=""><br class="">
</div>
<div class="">other attached packages:</div>
<div class=""> [1] FLSAM_1.0 FLBRP_2.5.20140822
reshape2_1.4.1 </div>
<div class=""> [4] plyr_1.8.3 ggplotFL_2.5.20160119
ggplot2_2.0.0 </div>
<div class=""> [7] FLAssess_2.5.20130716 FLash_2.5.2
FLa4a_0.700.1 </div>
<div class="">[10] coda_0.18-1 copula_0.999-14
triangle_0.10 </div>
<div class="">[13] mgcv_1.8-9 nlme_3.1-122
FLCore_2.5.20160107 </div>
<div class="">[16] Matrix_1.2-3 MASS_7.3-45
lattice_0.20-33 </div>
<div class=""><br class="">
</div>
<div class="">loaded via a namespace (and not attached):</div>
<div class=""> [1] Rcpp_0.12.3 magrittr_1.5
munsell_0.4.2 ADGofTest_0.3 </div>
<div class=""> [5] colorspace_1.2-6 pspline_1.0-17
stringr_1.0.0 tools_3.2.3 </div>
<div class=""> [9] grid_3.2.3 gtable_0.1.2
gridExtra_2.0.0 stringi_1.0-1 </div>
<div class="">[13] scales_0.3.0 gsl_1.9-10.1
stats4_3.2.3 stabledist_0.7-0</div>
<div class="">[17] mvtnorm_1.0-5</div>
</div>
<div class=""><br class="">
</div>
<div class="">#########</div>
<div class=""><br class="">
</div>
<div class="">The same code is working on linux. </div>
<div class=""><br class="">
</div>
<div class="">Any idea what’s going on? </div>
<div class=""><br class="">
</div>
<div class="">Thanks,</div>
<div class=""><br class="">
</div>
<div class="">Piera</div>
<div class=""><br class="">
<div apple-content-edited="true" class="">
<div style="color: rgb(0, 0, 0); letter-spacing: normal;
orphans: auto; text-align: start; text-indent: 0px;
text-transform: none; white-space: normal; widows: auto;
word-spacing: 0px; -webkit-text-stroke-width: 0px;
word-wrap: break-word; -webkit-nbsp-mode: space;
-webkit-line-break: after-white-space;" class="">----------------------------------</div>
<div style="color: rgb(0, 0, 0); letter-spacing: normal;
orphans: auto; text-align: start; text-indent: 0px;
text-transform: none; white-space: normal; widows: auto;
word-spacing: 0px; -webkit-text-stroke-width: 0px;
word-wrap: break-word; -webkit-nbsp-mode: space;
-webkit-line-break: after-white-space;" class="">Piera
Carpi, Ph.D.<br class="">
Istituto di Scienze del Mare (CNR-ISMAR)<br class="">
Sezione Pesca Marittima-Ancona<br class="">
Largo Fiera della Pesca<br class="">
60125, Ancona - ITALY<br class="">
Tel: 071-2078858<br class="">
Fax: 071-55313<br class="">
e-mail: <a moz-do-not-send="true"
href="mailto:piera.carpi@an.ismar.cnr.it" class="">piera.carpi@an.ismar.cnr.it</a><br
class="">
<br class="">
<br class="">
</div>
</div>
<br class="">
</div>
<br>
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<br>
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