[FLR-list] problem with FLSAM

[Silvia Angelini]

Thank you so much, Iago and Niels! Now it's work! I'm save! :) And sorry
for my late reply.
If I use the command suggested by Niels I can update the stock object, but
also with R 3.4 the command works.
Cheers,
Silvia




> Line 42 of methods.r seems to contain a #, probably that is the problem.
Don't have time to check now, but could look later this week.
> For the time being, doing: stock at harvest <- sam at harvest
> stock at stock.n <- sam at stock.n would work too
> Niels
> -----Original Message-----
> From: flr-list-bounces at lists.r-forge.r-project.org
> [mailto:flr-list-bounces at lists.r-forge.r-project.org] On Behalf Of
Iago.MOSQUEIRA at ec.europa.eu
> Sent: dinsdag 26 september 2017 9:24
> To: flr-list at flr-project.org
> Subject: Re: [FLR-list] problem with FLSAM
> Hi,
> I can replicate the problem but only in R 3.3 in Windows, both R 3.4 or
running in Linux work.
> Is there any chance you can move to R 3.4 for the time being? I can try
to
> take a look at this with Niels, but not before next week
> Best,
> Iago
> --
> Dr Iago Mosqueira
> European Commission
> DG Joint Research Centre
> Directorate D - Sustainable Resources
> Unit D.02 Water and Marine Resources
> TP 051, Via Enrico Fermi 2749
> I-21027 Ispra (VA), Italy
> Phone : +39 0332 785413
> iago.mosqueira at ec.europa.eu
> ________________________________________
> From: flr-list-bounces at lists.r-forge.r-project.org
> [flr-list-bounces at lists.r-forge.r-project.org] on behalf of Silvia
Angelini [silvia.angelini at an.ismar.cnr.it]
> Sent: 25 September 2017 21:10
> To: flr-list at flr-project.org
> Subject: Re: [FLR-list] problem with FLSAM
> Yes! Just run. Hereunder the results:
>> is(STOCK)
> [1] "FLStock" "FLS"     "FLComp"
>> is(STOCK.sam)
> [1] "FLSAM"  "FLComp"
> Thanks so much, Iago.
> Silvia
>> Can you please run
>> is(STOCK)
>> and
>> is(STOCK.sam)?
>> Iago
>> ---- On Mon, 25 Sep 2017 17:30:10 +0200 Silvia Angelini
>> <silvia.angelini at an.ismar.cnr.it> wrote ----
>> Hi all,
>> I'm running an assessment using FLSAM. I'm able to run the assessment, but
>> I'm not able to upload the stock object with the results.
>> This command doesn't work: STOCK <- STOCK + STOCK.sam.
>> And I've got this error:
>> Error in as.data.frame.default(x) :
>>  cannot coerce class "structure("FLStock", package = "FLCore")" to a
>> data.frame
>> I'm using version 3.3.2 of r and version 2.6.5 of FLCore.
>> Thank you so much in advance for your help.
>> Silvia
>> --
>> Dr. Silvia Angelini, Ph.D.
>> Institute of Marine Science (CNR-ISMAR)
>> Largo Fiera della Pesca
>> 60125, Ancona, Italy
>> Phone: 071-2078833
>> Fax: 071-55313
>> e-mail: silvia.angelini at an.ismar.cnr.it
>> _______________________________________________
>> flr-list mailing list
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_______________________________________________
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> --
> Dr. Silvia Angelini, Ph.D.
> Institute of Marine Science (CNR-ISMAR)
> Largo Fiera della Pesca
> 60125, Ancona, Italy
> Phone: 071-2078833
> Fax: 071-55313
> e-mail: silvia.angelini at an.ismar.cnr.it
> _______________________________________________
> flr-list mailing list
> flr-list at flr-project.org
> https://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/flr-list
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-- 
Dr. Silvia Angelini, Ph.D.
Institute of Marine Science (CNR-ISMAR)
Largo Fiera della Pesca
60125, Ancona, Italy
Phone: 071-2078833
Fax: 071-55313
e-mail: silvia.angelini at an.ismar.cnr.it