[FLR-list] Function fwd

[Diana González]

Dear Laurie,

I have put the code in a DropBox folder and I have invited this email address to share it. The folder is call "GHL_MSE_Diana" and the code is in the folder "Code" and is called "GhalMSE2010_RickeR2.14_Laurie.r" and is prepared to be run directly, with no loops in the middle (there are three loops that I removed: om loop, rp loop and ms loop, in order to make it easier). There is only one loop remains, the year loop, that is in line 672 and is for the projection years. The fwd function is called inside this loop, in line 736. I am trying to use R2.14.1 and: FLCore 2.4, FLAsses 2.0.1 and FLash 0.7.5. 

The problem, as I said yesterday, is that this code, written by David Miller in 2008, was used under R8.2.1 and older versions of FLR. But when we try to fit the Ricker Segmented regression relationship, that FLR doesn´t fit appropriately, whereas the R2.14.1 with the version of FLR that I said you works perfectly. So, I have tried to run all the code with R2.14.1 and the new FLR, and it works perfectly until the function fwd. It says me that there are unused parameters. 

Thank you very much for all.

Best,
Diana 

-----Mensaje original-----
De: flr-list-bounces at lists.r-forge.r-project.org [mailto:flr-list-bounces at lists.r-forge.r-project.org] En nombre de Diana González
Enviado el: jueves, 25 de abril de 2013 17:53
Para: flr-list at flr-project.org
Asunto: RE: [FLR-list] Function fwd

Ok, I have to go now but tomorrow I will share a DropBox folder with you if it is ok for you.

Thanks!!
Diana


-----Mensaje original-----
De: flr-list-bounces at lists.r-forge.r-project.org en nombre de Laurie Enviado el: jue 25/04/2013 17:40
Para: flr-list at flr-project.org
Asunto: Re: [FLR-list] Function fwd
 
why not put your workspace in a dropbox folder and I will look at it

Laurie

On 25/04/13 17:14, Diana González wrote:
> Dear Laurie,
>
> Thank you for your answer. I have loaded FLash and now I have another 
> error message. The code for fwd is the following
>
>        res <- fwd(GH.biol, GH.fleet, year=y, TAC=yrCatch, 
> sr.model="ricker", sr.param=sr.params, sr.residuals=sr.resids[,ac(y)])
>
> GH.biol is a FLBiol and GH.fleet is a FLFleet. I have loaded the libraries FLCore, FLXSA, FLAssess and FLash.
>
> Now the program gives me the following error:
>
>      Error en .local(object, fleets, ...) :
>       the argument was no used (year = 2010, TAC = 25375, sr.model = 
> "ricker", sr.param = c(35.7146729757961, 9.63966684532422e-05))
>
> I don´t know if the code of fwd was changed and the parameters of the function are others... Any suggestion?
>
> Thank you very much,
> Diana
>
>
>
> -----Mensaje original-----
> De: flr-list-bounces at lists.r-forge.r-project.org en nombre de Laurie 
> Enviado el: jue 25/04/2013 16:32
> Para: flr-list at flr-project.org
> Asunto: Re: [FLR-list] Function fwd
>   
> On 25/04/13 15:06, Diana González wrote:
>> Function fwd
>>
>> Good afternoon,
>>
>> This is my first time posting, and I don´t know if I amdoingit 
>> correctly...Hope so!!
>>
>> I have a problem with a change in the version of FLR. I was using an 
>> old FLRin R2.8.1to make a MSE for the GHL in NAFO, via the function 
>> fwd. It works perfectly to forward the population to the future. But 
>> now Ichangethe version of R and theversionof FLR. The version of R 
>> that I use know is the R2.14.1, but I am not sure about the version 
>> of FLR. The problem isthatwhen I try to make the projections via the 
>> function fwd, it says that"thefunctionfwdcan´t be found". Has this 
>> function changedthe namein the newest versions of FLR?
>>
>> Thanks!!
>>
>> Diana Gonzalez
>>
>>
>>
>> _______________________________________________
>> flr-list mailing list
>> flr-list at flr-project.org
>> https://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/flr-list
> "fwd" is still called "fwd".
>
> Have you loaded FLash?
>
> Laurie
>
>
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