[FLR-list] Problems with fwd()

Luis Ridao luridao at gmail.com
Tue Mar 20 13:09:20 CET 2012


I have attached the input files and the script (the workspace is too large
>60 MB)


Best,
Luis

On Tue, Mar 20, 2012 at 11:57 AM, Laurie <lauriekell at googlemail.com> wrote:

>  Send me the objects and code and I will try and run it.
>
> Laurie
>
>
> On 03/20/2012 12:21 PM, Luis Ridao wrote:
>
> FLR-help,
>
>  I'm having problems with a MSE.
> I copy-paste the line which gives the error:
>
>  ...
> ...
>      * print("OK to here1")*
> *      ## project MP to TAC year with the HCR and geom mean recr.*
> *
> MP<-fwd(MP,ctrl=target,sr=list(model="mean",params=FLPar(1)),sr.residuals=SRrs)
> *
>  ...
>  ...
>
>  Year =2011
> [1] "OK to here1"
> *Error in .local(object, ctrl, ...) : 6*
>
>
>  My target is :
>  > *target*
>
>  Target
>   year min       val   max quantity season area unit spp fleet metier
> rel.year
> 1 2011  NA 0.4550558    NA        f     NA   NA   NA  NA    NA     NA
>   NA
> 2 2012  NA 0.3200000    NA        f     NA   NA   NA  NA    NA     NA
>   NA
> 3 2012   0        NA 40000    catch     NA   NA   NA  NA    NA     NA
>   NA
> 4 2012  NA 2.0000000    NA        f     NA   NA   NA  NA    NA     NA
>   NA
>   rel.season rel.area rel.unit
>  1         NA       NA       NA
> 2         NA       NA       NA
> 3         NA       NA       NA
> 4         NA       NA       NA
>
>     min        val        max
>    1         NA 4.5506e-01         NA
>   2         NA 3.2000e-01         NA
>   3 0.0000e+00         NA 4.0000e+04
>   4         NA         NA 2.0000e+00
>
>  the '*sr*' object :
>
>  > list(model="mean",params=FLPar(1))
> $model
> [1] "mean"
>
>  $params
> An object of class "FLPar"
> params
> a
> 1
> units:  NA
>
>  and the Sr residuals:
>
>  > *SRrs*
> An object of class "FLQuant"
> iters:  1000
>
>  , , unit = unique, season = all, area = unique
>
>       year
> quant 2011     2012     2013
>   all 27355(0) 27355(0) 27355(0)
>
>  units:  NA
>
>  R version :               R.2.14.2
>  FLash Version:         2.5.0
>  FLAdvice Version:    1.0
>  FLXSA Version:       2.5
>  FLAssess Version:   2.5
>  FLCore Version:       2.5
>
>  Running on Ubuntu 10.04.04
>
>  Thanks in advance
>
>
>
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>
>
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