[Distr-commits] r875 - branches branches/distr-2.5/pkg/SweaveListingUtils branches/distr-2.5/pkg/SweaveListingUtils/inst branches/distr-2.5/pkg/distr/inst branches/distr-2.5/pkg/distrDoc/inst branches/distr-2.5/pkg/distrEx/inst branches/distr-2.5/pkg/distrMod/inst branches/distr-2.5/pkg/distrSim/inst branches/distr-2.5/pkg/distrTEst/inst branches/distr-2.5/pkg/distrTeach/inst branches/distr-2.5/pkg/startupmsg branches/distr-2.5/pkg/startupmsg/inst pkg/SweaveListingUtils pkg/SweaveListingUtils/inst pkg/SweaveListingUtils/man pkg/distr pkg/distr/inst pkg/distr/man pkg/distrDoc pkg/distrDoc/inst pkg/distrDoc/man pkg/distrEx pkg/distrEx/inst pkg/distrEx/man pkg/distrMod pkg/distrMod/inst pkg/distrMod/man pkg/distrRmetrics pkg/distrRmetrics/man pkg/distrSim pkg/distrSim/inst pkg/distrSim/man pkg/distrTEst pkg/distrTEst/inst pkg/distrTEst/man pkg/distrTeach pkg/distrTeach/inst pkg/distrTeach/man pkg/startupmsg pkg/startupmsg/inst

noreply at r-forge.r-project.org noreply at r-forge.r-project.org
Tue Feb 5 01:01:15 CET 2013


Author: ruckdeschel
Date: 2013-02-05 01:01:14 +0100 (Tue, 05 Feb 2013)
New Revision: 875

Added:
   branches/NEWS2-4.txt
Modified:
   branches/distr-2.5/pkg/SweaveListingUtils/DESCRIPTION
   branches/distr-2.5/pkg/SweaveListingUtils/inst/NEWS
   branches/distr-2.5/pkg/distr/inst/NEWS
   branches/distr-2.5/pkg/distrDoc/inst/NEWS
   branches/distr-2.5/pkg/distrEx/inst/NEWS
   branches/distr-2.5/pkg/distrMod/inst/NEWS
   branches/distr-2.5/pkg/distrSim/inst/NEWS
   branches/distr-2.5/pkg/distrTEst/inst/NEWS
   branches/distr-2.5/pkg/distrTeach/inst/NEWS
   branches/distr-2.5/pkg/startupmsg/DESCRIPTION
   branches/distr-2.5/pkg/startupmsg/inst/NEWS
   pkg/SweaveListingUtils/DESCRIPTION
   pkg/SweaveListingUtils/inst/NEWS
   pkg/SweaveListingUtils/man/0SweaveListingUtils-package.Rd
   pkg/distr/DESCRIPTION
   pkg/distr/inst/NEWS
   pkg/distr/man/0distr-package.Rd
   pkg/distrDoc/DESCRIPTION
   pkg/distrDoc/inst/NEWS
   pkg/distrDoc/man/0distrDoc-package.Rd
   pkg/distrEx/DESCRIPTION
   pkg/distrEx/inst/NEWS
   pkg/distrEx/man/0distrEx-package.Rd
   pkg/distrMod/DESCRIPTION
   pkg/distrMod/inst/NEWS
   pkg/distrMod/man/0distrMod-package.Rd
   pkg/distrRmetrics/DESCRIPTION
   pkg/distrRmetrics/man/0distrRmetrics-package.Rd
   pkg/distrSim/DESCRIPTION
   pkg/distrSim/inst/NEWS
   pkg/distrSim/man/0distrSim-package.Rd
   pkg/distrTEst/DESCRIPTION
   pkg/distrTEst/inst/NEWS
   pkg/distrTEst/man/0distrTEst-package.Rd
   pkg/distrTeach/DESCRIPTION
   pkg/distrTeach/inst/NEWS
   pkg/distrTeach/man/0distrTeach-package.Rd
   pkg/startupmsg/DESCRIPTION
   pkg/startupmsg/inst/NEWS
Log:
updated NEWS files, updated date information in DESCRIPTION and 0<pkg>-package.Rd files

Added: branches/NEWS2-4.txt
===================================================================
--- branches/NEWS2-4.txt	                        (rev 0)
+++ branches/NEWS2-4.txt	2013-02-05 00:01:14 UTC (rev 875)
@@ -0,0 +1,374 @@
+notes, warnings:
+R-3.0.0dev:  obtain note
+Possibly mis-spelled fields in DESCRIPTION:
+  'SVNRevision'
+... do not know why?
+
+
+In R-2.15.2pat, we obtain the following warning in distr:
+* checking foreign function calls ... WARNING
+Foreign function calls with 'PACKAGE' argument in a base package:
+  .C("pkolmogorov2x", ..., PACKAGE = "stats")
+  .C("pkstwo", ..., PACKAGE = "stats")
+Packages should not make .C/.Call/.Fortran calls to base packages. They
+are not part of the API, for use only by R itself and subject to change
+without notice.
+
+We are aware of it and know that it is related to NEWS entry
+
+"
+‘R CMD check’ now checks for ‘.C()’, ‘.Call()’, ‘.External()’ and
+‘.Fortran()’ calls in other packages, and gives a warning on those 
+found from R itself (which are not part of the API and change 
+without notice: many will changed for R 3.0.0).
+"
+
+Oct, 09 2012 we contacted Brian Ripley in this issue:
+
+>Up to now, in package distr, in our function qqbounds, we
+>used pkg stats C-functions pkolmogorov2x, pkstwo to construct
+>simultaneous confidence bands for our distr-S4-methods for
+>qqplot (code to call pkolmogorov2x, pkstwo taken from
+>ks.test from pkg stats and mentioned so in our Rd's since
+>~ 3yrs).
+
+[ We cannot use the API return value of ks.test in this case, as 
+  we have to be able to evaluate pkolmogorov2x, pkstwo at 
+  arbitrary input values not just at the ks.test statistics. ]
+
+>We did notice that just recently you/R-core switched from
+>using .C to .Call in R-devel and from pkolmogorov2x, pkstwo
+>to C_pKS2, C_pKolmogorov2x .
+
+>Hence, in our devel versions, we now have a corresponding
+>if-switch according to (getRversion()<"2.16.0") for
+>defining the interface.
+
+>Still, according to the changes in R CMD check mentioned
+>above our code will nevertheless produce warnings and hence
+>get problems on CRAN.
+
+>Could you/R-core please help us avoid this, providing us
+>with API-function wrappers for C_pKS2, C_pKolmogorov2x
+>then?
+
+This is perhaps not necessary; and, in R-3.0.0dev we
+no longer get any warnings on this, anyway.
+
+
+######################################################################
+#  News: to package startupmsg
+######################################################################
+
+##############
+v 0.8
+##############
+
+under the hood: 
++ startupmsg gains a namespace
++ added DESCRIPTION tag "ByteCompile" to all our packages
++ updating maintainer email address and URL.
++ deleted no longer needed chm folders
+
+######################################################################
+#  News: to package SweaveListingUtils
+######################################################################
+ 
+##############
+v 0.6
+##############
+
+under the hood:
+
++ added DESCRIPTION tag "ByteCompile" to all our packages
++ updating maintainer email address and URL.
++ added argument no.readonly = TRUE to assignments of form opar <- par()
++ .Rbuildignore  as a reaction to B. Ripley's mail on r-devel, "CRAN package sizes",  Feb-14-2011, 
++ created folder vignettes and moved content of inst/doc/ to it
++ removed lazyload tag in DESCRIPTION
++ deleted inst/doc folder
++ argument kws in setBaseOrRecommended() gains default value
++ changed assignment from assignInNamespace to assignInMyNamespace
++ alerted by Kurt Hornik: added several packages to "suggests" tag in DESCRIPTION (trunk)
++ wrapped calls to readLines in SourceFromRForge in try() in order to avoid errors when R-forge site is down (triggered by B. Ripley's mail from Feb 1, 2012).
++ removed obsolete base-argument "version" of library, require 
++ NOTE included in starting message that support will stop soon and that rather pkg knitr is to be used
++ fixed wrong argument structure for library() 
++ deleted no longer needed chm folders
+
+BUGFIXES:
++ fixed strip.white issue in pkg SweaveListingUtils
++ changed chunk option strip.white from FALSE to false
+
+
+######################################################################
+#  News: to package distr 
+######################################################################
+
+(first two numbers of package versions do not necessarily reflect 
+ package-individual development, but rather are chosen for the 
+ distrXXX family as a whole in order to ease updating "depends" 
+ information)
+ 
+##############
+v 2.4
+##############
+
+user-visible CHANGES:
++ introduced new option warn.makeDNew to suppress annoying warnings when dealing with GEVD
+
+GENERAL ENHANCEMENTS:
+
+LatticeDistribution:::
++ revised initialize and convolution methods, and generating function
+-> new routine to determine the smallest common grid for convolution
++ Taking up proposal by Baoyue Li, b.li at erasmusmc.nl,  
+   plot methods for distribution objects gain functionality to modify xlab and ylab
+
+
+under the hood:
++ introduce .Rbuildignore files 
++ require no longer called in .onAttach
++ created folder vignettes and moved content of inst/doc/ to it
++ removed lazyload tag in DESCRIPTION
++ updated affiliation info in newDistributions.Rnw
++ deleted inst/doc folder
++ added DESCRIPTION tag "ByteCompile" to all our packages
++ updating maintainer email address and URL.
++ added argument no.readonly = TRUE to assignments of form opar <- par()
++ unified dots-manipulations
++ put some examples in "\dontrun" to reduce check time on CRAN
++ introduced new option warn.makeDNew to suppress annoying warnings when dealing with GEVD
++ deleted no longer needed chm folders
+
+BUGFIXES:
+
++ fixed an error in show method for UnivarLebDecDistribution: 
+  match.call() threw an error
++ fixed problems with .makeDNew - as .makeDNew is not exported
++ error in definition of Beta() --- d slot was wrong
++ corrected typo (inifinite...)
++ typo in Beta-class.Rd (only in TeX mode) discovered by Thomas Kirschenmann, thk3421 at gmail.com
++ fixed some issue with X^a, X distribution, a a number ...
++ tried to fix gaps issue as mentioned by Dirk Surmann, surmann at statistik.uni-dortmund.de
++ corrected a bug noticed by frank1828 at gmail.com
++ fixed a bug within internals-qqplot : withConf.sim, withConf.pw had not been removed from call with 
+  .deleteItemsMCL; 
++ fixed request by B.Ripley as to installed.packages in branch 2.4
++ fixed gaps issue with .multm
++ fixed gaps handling if length(gaps)==0
+  
+  and: BDR has changed calls to .C in 2.16.0 to calls to .Call; we used this in qqbounds, 
+  respectively in .q2kolmogorov; now have branching functions .pk2 and .pks2 between ante 2.16. and from 2.16 on
+
+######################################################################
+#  News: to package distrEx
+######################################################################
+
+(first two numbers of package versions do not necessarily reflect 
+ package-individual development, but rather are chosen for the 
+ distrXXX family as a whole in order to ease updating "depends" 
+ information)
+ 
+##############
+v 2.4
+##############
+
+user-visible CHANGES:
++ moved functionality for extreme value distribution to package RobExtremes
+-> concerns distributions Gumbel, GEVD, GPareto, and Pareto
++ moved functional and estimator kMAD to package RobExtremes
+
+under the hood:
++ added DESCRIPTION tag "ByteCompile" to all our packages
++ updating maintainer email address and URL.
++ added argument no.readonly = TRUE to assignments of form opar <- par()
++ deleted no longer needed chm folders
+
+
+
+BUGFIXES:
+
++ corrected bug in var() (with argument fun in case of symmetry)
+
+######################################################################
+#  News: to package distrTeach
+######################################################################
+
+(first two numbers of package versions do not necessarily reflect 
+ package-individual development, but rather are chosen for the 
+ distrXXX family as a whole in order to ease updating "depends" 
+ information)
+ 
+##############
+v 2.4
+##############
+
+under the hood:
++ removed lazyload tag in DESCRIPTION
++ added DESCRIPTION tag "ByteCompile" to all our packages
++ updating maintainer email address and URL.
++ added argument no.readonly = TRUE to assignments of form opar <- par()
++ deleted no longer needed chm folders
+
+
+######################################################################
+#  News: to package distrEllipse 
+######################################################################
+
+(first two numbers of package versions do not necessarily reflect 
+ package-individual development, but rather are chosen for the 
+ distrXXX family as a whole in order to ease updating "depends" 
+ information)
+
+##############
+v 2.4
+##############
+
+under the hood:
++ removed lazyload tag in DESCRIPTION
++ added DESCRIPTION tag "ByteCompile" to all our packages
++ updating maintainer email address and URL.
++ added argument no.readonly = TRUE to assignments of form opar <- par()
++ deleted no longer needed chm folders
+
+######################################################################
+#  News: to package distrSim 
+######################################################################
+
+(first two numbers of package versions do not necessarily reflect 
+ package-individual development, but rather are chosen for the 
+ distrXXX family as a whole in order to ease updating "depends" 
+ information)
+
+##############
+v 2.4
+##############
+
+under the hood:
++ removed lazyload tag in DESCRIPTION
++ fixed request by B.Ripley as to installed.packages in branch 2.4
++ deleted no longer needed chm folders
+
+
+######################################################################
+#  News: to package distrTEst 
+######################################################################
+
+##############
+v 2.4
+##############
+
+under the hood:
++ some coercings to logical forced, e.g. AllClasses.R 
++ fixed (new discovered) error in distrTEst (sd no longer applies to matrices).
++ removed lazyload tag in DESCRIPTION
++ added DESCRIPTION tag "ByteCompile" to all our packages
++ updating maintainer email address and URL.
++ deleted no longer needed chm folders
+
+
+######################################################################
+#  News: to package distrMod 
+######################################################################
+
+(first two numbers of package versions do not necessarily reflect 
+ package-individual development, but rather are chosen for the 
+ distrXXX family as a whole in order to ease updating "depends" 
+ information)
+
+##############
+v 2.4
+##############
+
+user-visible CHANGES:
++ moved GumbelLocationFamily to new package "RobExtremes"
++ new function addAlphTrsp2col to add alpha transparency to a 
+  given color; qqplot gains argument alpha.trsp to control for alpha transparency
+
+
+under the hood:
++ added modifyModel method for ParamFamily, some minor corrections due to more strict checking in R devel
++ created folder vignettes and moved content of inst/doc/ to it
++ removed lazyload tag in DESCRIPTION
++ updated affiliation info in newDistributions.Rnw
++ deleted inst/doc folder
++ .Rbuildignore file as a reaction to B. Ripley's mail on r-devel, 
+   "CRAN package sizes",  Feb-14-2011
++ added computation of relative error in checkL2deriv - 
+  maybe there is a better idea avoiding division by zero, 
++ added DESCRIPTION tag "ByteCompile" to all our packages
++ updating maintainer email address and URL.
++ added argument no.readonly = TRUE to assignments of form opar <- par()
++ new intermediate classes/ class unions for scale families and scale shape families; 
++ consequent use of argument validity.check in MCE estimators.
++ removed relics of ancient L2Fam-slot withPos (was introduced in a try)
++ introduced slot scaleshapename for L2ScaleShapeUnion and methods scalename und scaleshapename (accessor/replacers)
++ after change of @<- semantics by J. Chambers moved from  class(M) <- class(model)  to slotwise copying
++ S4Method "mceCalc", signature(x = "numeric", PFam = "ParamFamily") gains additional 
+  calls to makeOKPar() to warrant admissible parameter values
++ Estimator can now deal with asymptotic variances if given; to this end 
+  gains optional argument ParamFamily 
++ put some examples in \dontrun to reduce check time on CRAN
++ Default name of Estimator is now "Estimator"
++ deleted no longer needed chm folders
+
+BUGFIXES:
+
++ bugfixes in NbinomMeanSizeFamily 
+                 and NbinomwithSizeFamily (detected by Matthias!)
++ digamma instead of trigamma
++ validparameter: fixed a bug with slot withPosRestr (which is not a member of 
+                  L2ParamFamily but of the respective parameter!) 
+
+######################################################################
+#  News: to package distrRmetrics
+######################################################################
+
+(first two numbers of package versions do not necessarily reflect 
+ package-individual development, but rather are chosen for the 
+ distrXXX family as a whole in order to ease updating "depends" 
+ information)
+
+##############
+v 2.4
+##############
++ created new package 'distrRmetrics' with support for skew t and normal
+  distributions from package fGarch
+
+######################################################################
+#  News: to package distrDoc 
+######################################################################
+
+(first two numbers of package versions do not necessarily reflect 
+ package-individual development, but rather are chosen for the 
+ distrXXX family as a whole in order to ease updating "depends" 
+ information)
+
+##############
+v 2.4
+##############
+
+user-visible CHANGES:
++ changed affiliations in vignette
++ vignette has shrunken in size from > 5MB to < 3MB
++ mentioned that we have moved evd support, and Gumbel, Weibull, Pareto distribution to RobExtremes
+
+GENERAL ENHANCEMENTS:
+
+under the hood:
++ as a reaction to B. Ripley's mail on r-devel, "CRAN package sizes", 
+  Feb-14-2011, we introduce .Rbuildignore files
++ pkg distrDoc gains a NAMESPACE
++ created folder vignettes and moved content of inst/doc/ to it
++ removed lazyload tag in DESCRIPTION
++ distrDoc no longer uses require() in .onAttach
++ added DESCRIPTION tag "ByteCompile" to all our packages
++ updating maintainer email address and URL.
++ shrinking inst/doc in order to prevent  B. Ripley from archiving distrDoc
++ tried to get the imports in NAMESPACE files in the right order
++ For some strange reason, examle CIex in vignette threw an error; have changed seed; now it works again.
++ deleted no longer needed chm folders
+
+BUGFIXES:
+

Modified: branches/distr-2.5/pkg/SweaveListingUtils/DESCRIPTION
===================================================================
--- branches/distr-2.5/pkg/SweaveListingUtils/DESCRIPTION	2013-02-04 22:43:28 UTC (rev 874)
+++ branches/distr-2.5/pkg/SweaveListingUtils/DESCRIPTION	2013-02-05 00:01:14 UTC (rev 875)
@@ -1,7 +1,7 @@
 Package: SweaveListingUtils
 Title: Utilities for Sweave together with TeX listings package
 Encoding: latin1
-Version: 0.6
+Version: 0.7
 Depends: R(>= 2.10.0), startupmsg
 Suggests: distr, MASS, survival, distrEx, Matrix, splines
 Imports: stats

Modified: branches/distr-2.5/pkg/SweaveListingUtils/inst/NEWS
===================================================================
--- branches/distr-2.5/pkg/SweaveListingUtils/inst/NEWS	2013-02-04 22:43:28 UTC (rev 874)
+++ branches/distr-2.5/pkg/SweaveListingUtils/inst/NEWS	2013-02-05 00:01:14 UTC (rev 875)
@@ -3,6 +3,18 @@
 ######################################################################
  
 ##############
+v 0.7
+##############
+
+user-visible CHANGES:
+
+GENERAL ENHANCEMENTS:
+
+under the hood:
+
+BUGFIXES:
+
+##############
 v 0.6
 ##############
 
@@ -22,6 +34,7 @@
 + removed obsolete base-argument "version" of library, require 
 + NOTE included in starting message that support will stop soon and that rather pkg knitr is to be used
 + fixed wrong argument structure for library() 
++ deleted no longer needed chm folders
 
 BUGFIXES:
 + fixed strip.white issue in pkg SweaveListingUtils

Modified: branches/distr-2.5/pkg/distr/inst/NEWS
===================================================================
--- branches/distr-2.5/pkg/distr/inst/NEWS	2013-02-04 22:43:28 UTC (rev 874)
+++ branches/distr-2.5/pkg/distr/inst/NEWS	2013-02-05 00:01:14 UTC (rev 875)
@@ -8,6 +8,19 @@
  information)
  
 ##############
+v 2.5
+##############
+
+user-visible CHANGES:
+
+GENERAL ENHANCEMENTS:
+
+under the hood:
+
+BUGFIXES:
+
+
+##############
 v 2.4
 ##############
 
@@ -33,6 +46,10 @@
 + added DESCRIPTION tag "ByteCompile" to all our packages
 + updating maintainer email address and URL.
 + added argument no.readonly = TRUE to assignments of form opar <- par()
++ unified dots-manipulations
++ put some examples in "\dontrun" to reduce check time on CRAN
++ introduced new option warn.makeDNew to suppress annoying warnings when dealing with GEVD
++ deleted no longer needed chm folders
 
 
 BUGFIXES:
@@ -50,6 +67,7 @@
   .deleteItemsMCL; 
 + fixed request by B.Ripley as to installed.packages in branch 2.4
 + fixed gaps issue with .multm
++ fixed issue with gaps (in case length(gaps)==0)
   
   and: BDR has changed calls to .C in 2.16.0 to calls to .Call; we used this in qqbounds, 
   respectively in .q2kolmogorov; now have branching functions .pk2 and .pks2 between ante 2.16. and from 2.16 on

Modified: branches/distr-2.5/pkg/distrDoc/inst/NEWS
===================================================================
--- branches/distr-2.5/pkg/distrDoc/inst/NEWS	2013-02-04 22:43:28 UTC (rev 874)
+++ branches/distr-2.5/pkg/distrDoc/inst/NEWS	2013-02-05 00:01:14 UTC (rev 875)
@@ -8,6 +8,18 @@
  information)
 
 ##############
+v 2.5
+##############
+
+user-visible CHANGES:
+
+GENERAL ENHANCEMENTS:
+
+under the hood:
+
+BUGFIXES:
+
+##############
 v 2.4
 ##############
 
@@ -29,6 +41,7 @@
 + shrinking inst/doc in order to prevent  B. Ripley from archiving distrDoc
 + tried to get the imports in NAMESPACE files in the right order
 + For some strange reason, examle CIex in vignette threw an error; have changed seed; now it works again.
++ deleted no longer needed chm folders
 
 BUGFIXES:
 

Modified: branches/distr-2.5/pkg/distrEx/inst/NEWS
===================================================================
--- branches/distr-2.5/pkg/distrEx/inst/NEWS	2013-02-04 22:43:28 UTC (rev 874)
+++ branches/distr-2.5/pkg/distrEx/inst/NEWS	2013-02-05 00:01:14 UTC (rev 875)
@@ -8,6 +8,18 @@
  information)
  
 ##############
+v 2.5
+##############
+
+user-visible CHANGES:
+
+GENERAL ENHANCEMENTS:
+
+under the hood:
+
+BUGFIXES:
+
+##############
 v 2.4
 ##############
 
@@ -20,6 +32,7 @@
 + added DESCRIPTION tag "ByteCompile" to all our packages
 + updating maintainer email address and URL.
 + added argument no.readonly = TRUE to assignments of form opar <- par()
++ deleted no longer needed chm folders
 
 
 

Modified: branches/distr-2.5/pkg/distrMod/inst/NEWS
===================================================================
--- branches/distr-2.5/pkg/distrMod/inst/NEWS	2013-02-04 22:43:28 UTC (rev 874)
+++ branches/distr-2.5/pkg/distrMod/inst/NEWS	2013-02-05 00:01:14 UTC (rev 875)
@@ -8,11 +8,25 @@
  information)
 
 ##############
+v 2.5
+##############
+
+user-visible CHANGES:
+
+GENERAL ENHANCEMENTS:
+
+under the hood:
+
+BUGFIXES:
+
+##############
 v 2.4
 ##############
 
 user-visible CHANGES:
 + moved GumbelLocationFamily to new package "RobExtremes"
++ new function addAlphTrsp2col to add alpha transparency to a 
+  given color; qqplot gains argument alpha.trsp to control for alpha transparency
 
 under the hood:
 + added modifyModel method for ParamFamily, some minor corrections due to more strict checking in R devel
@@ -32,13 +46,22 @@
 + removed relics of ancient L2Fam-slot withPos (was introduced in a try)
 + introduced slot scaleshapename for L2ScaleShapeUnion and methods scalename und scaleshapename (accessor/replacers)
 + after change of @<- semantics by J. Chambers moved from  class(M) <- class(model)  to slotwise copying
++ S4Method "mceCalc", signature(x = "numeric", PFam = "ParamFamily") gains additional 
+  calls to makeOKPar() to warrant admissible parameter values
++ Estimator can now deal with asymptotic variances if given; to this end 
+  gains optional argument ParamFamily 
++ put some examples in \dontrun to reduce check time on CRAN
++ deleted file GumbelLocationFamily.Rd (no longer needed)
++ Default name of Estimator is now "Estimator"
++ deleted no longer needed chm folders
 
-
 BUGFIXES:
 
 + bugfixes in NbinomMeanSizeFamily 
                  and NbinomwithSizeFamily (detected by Matthias!)
-+ digamma instead of trigamma
++ digamma was used instead of trigamma
++ validparameter: fixed a bug with slot withPosRestr (which is not a member of 
+                  L2ParamFamily but of the respective parameter!) 
 
 
 

Modified: branches/distr-2.5/pkg/distrSim/inst/NEWS
===================================================================
--- branches/distr-2.5/pkg/distrSim/inst/NEWS	2013-02-04 22:43:28 UTC (rev 874)
+++ branches/distr-2.5/pkg/distrSim/inst/NEWS	2013-02-05 00:01:14 UTC (rev 875)
@@ -8,12 +8,25 @@
  information)
 
 ##############
+v 2.5
+##############
+
+user-visible CHANGES:
+
+GENERAL ENHANCEMENTS:
+
+under the hood:
+
+BUGFIXES:
+
+##############
 v 2.4
 ##############
 
 under the hood:
 + removed lazyload tag in DESCRIPTION
 + fixed request by B.Ripley as to installed.packages in branch 2.4
++ deleted no longer needed chm folders
 
 ##############
 v 2.3

Modified: branches/distr-2.5/pkg/distrTEst/inst/NEWS
===================================================================
--- branches/distr-2.5/pkg/distrTEst/inst/NEWS	2013-02-04 22:43:28 UTC (rev 874)
+++ branches/distr-2.5/pkg/distrTEst/inst/NEWS	2013-02-05 00:01:14 UTC (rev 875)
@@ -3,6 +3,18 @@
 ######################################################################
 
 ##############
+v 2.5
+##############
+
+user-visible CHANGES:
+
+GENERAL ENHANCEMENTS:
+
+under the hood:
+
+BUGFIXES:
+
+##############
 v 2.4
 ##############
 
@@ -12,6 +24,7 @@
 + removed lazyload tag in DESCRIPTION
 + added DESCRIPTION tag "ByteCompile" to all our packages
 + updating maintainer email address and URL.
++ deleted no longer needed chm folders
 
 ##############
 v 2.3

Modified: branches/distr-2.5/pkg/distrTeach/inst/NEWS
===================================================================
--- branches/distr-2.5/pkg/distrTeach/inst/NEWS	2013-02-04 22:43:28 UTC (rev 874)
+++ branches/distr-2.5/pkg/distrTeach/inst/NEWS	2013-02-05 00:01:14 UTC (rev 875)
@@ -8,6 +8,18 @@
  information)
  
 ##############
+v 2.5
+##############
+
+user-visible CHANGES:
+
+GENERAL ENHANCEMENTS:
+
+under the hood:
+
+BUGFIXES:
+
+##############
 v 2.4
 ##############
 
@@ -16,6 +28,7 @@
 + added DESCRIPTION tag "ByteCompile" to all our packages
 + updating maintainer email address and URL.
 + added argument no.readonly = TRUE to assignments of form opar <- par()
++ deleted no longer needed chm folders
 
 ##############
 v 2.3

Modified: branches/distr-2.5/pkg/startupmsg/DESCRIPTION
===================================================================
--- branches/distr-2.5/pkg/startupmsg/DESCRIPTION	2013-02-04 22:43:28 UTC (rev 874)
+++ branches/distr-2.5/pkg/startupmsg/DESCRIPTION	2013-02-05 00:01:14 UTC (rev 875)
@@ -1,6 +1,6 @@
 Package: startupmsg
 Encoding: latin1
-Version: 0.8
+Version: 0.9
 Date: 2011-11-18
 Title: Utilities for start-up messages
 Description: Utilities for start-up messages

Modified: branches/distr-2.5/pkg/startupmsg/inst/NEWS
===================================================================
--- branches/distr-2.5/pkg/startupmsg/inst/NEWS	2013-02-04 22:43:28 UTC (rev 874)
+++ branches/distr-2.5/pkg/startupmsg/inst/NEWS	2013-02-05 00:01:14 UTC (rev 875)
@@ -3,6 +3,18 @@
 ######################################################################
 
 ##############
+v 0.9
+##############
+
+user-visible CHANGES:
+
+GENERAL ENHANCEMENTS:
+
+under the hood:
+
+BUGFIXES:
+
+##############
 v 0.8
 ##############
 
@@ -10,6 +22,7 @@
 + startupmsg gains a namespace
 + added DESCRIPTION tag "ByteCompile" to all our packages
 + updating maintainer email address and URL.
++ deleted no longer needed chm folders
 
 ##############
 v 0.7

Modified: pkg/SweaveListingUtils/DESCRIPTION
===================================================================
--- pkg/SweaveListingUtils/DESCRIPTION	2013-02-04 22:43:28 UTC (rev 874)
+++ pkg/SweaveListingUtils/DESCRIPTION	2013-02-05 00:01:14 UTC (rev 875)
@@ -13,7 +13,7 @@
         source code
 Maintainer: Peter Ruckdeschel <Peter.Ruckdeschel at itwm.fraunhofer.de>
 License: LGPL-3
-Date: 2013-01-30
+Date: 2013-02-05
 LastChangedDate: {$LastChangedDate$}
 LastChangedRevision: {$LastChangedRevision$}
 SVNRevision: 834

Modified: pkg/SweaveListingUtils/inst/NEWS
===================================================================
--- pkg/SweaveListingUtils/inst/NEWS	2013-02-04 22:43:28 UTC (rev 874)
+++ pkg/SweaveListingUtils/inst/NEWS	2013-02-05 00:01:14 UTC (rev 875)
@@ -22,6 +22,7 @@
 + removed obsolete base-argument "version" of library, require 
 + NOTE included in starting message that support will stop soon and that rather pkg knitr is to be used
 + fixed wrong argument structure for library() 
++ deleted no longer needed chm folders
 
 BUGFIXES:
 + fixed strip.white issue in pkg SweaveListingUtils

Modified: pkg/SweaveListingUtils/man/0SweaveListingUtils-package.Rd
===================================================================
--- pkg/SweaveListingUtils/man/0SweaveListingUtils-package.Rd	2013-02-04 22:43:28 UTC (rev 874)
+++ pkg/SweaveListingUtils/man/0SweaveListingUtils-package.Rd	2013-02-05 00:01:14 UTC (rev 875)
@@ -16,7 +16,7 @@
 \tabular{ll}{
 Package: \tab SweaveListingUtils \cr
 Version: \tab 0.6 \cr
-Date: \tab 2013-01-30 \cr
+Date: \tab 2013-02-05 \cr
 Depends: \tab R(>= 2.10.0), startupmsg \cr
 LazyLoad: \tab yes \cr
 License: \tab LGPL-3 \cr

Modified: pkg/distr/DESCRIPTION
===================================================================
--- pkg/distr/DESCRIPTION	2013-02-04 22:43:28 UTC (rev 874)
+++ pkg/distr/DESCRIPTION	2013-02-05 00:01:14 UTC (rev 875)
@@ -1,6 +1,6 @@
 Package: distr
 Version: 2.4
-Date: 2013-01-30
+Date: 2013-02-05
 Title: Object oriented implementation of distributions
 Description: S4 Classes and Methods for distributions
 Author: Florian Camphausen, Matthias Kohl, Peter Ruckdeschel, Thomas Stabla

Modified: pkg/distr/inst/NEWS
===================================================================
--- pkg/distr/inst/NEWS	2013-02-04 22:43:28 UTC (rev 874)
+++ pkg/distr/inst/NEWS	2013-02-05 00:01:14 UTC (rev 875)
@@ -33,8 +33,11 @@
 + added DESCRIPTION tag "ByteCompile" to all our packages
 + updating maintainer email address and URL.
 + added argument no.readonly = TRUE to assignments of form opar <- par()
++ unified dots-manipulations
++ put some examples in "\dontrun" to reduce check time on CRAN
++ introduced new option warn.makeDNew to suppress annoying warnings when dealing with GEVD
++ deleted no longer needed chm folders
 
-
 BUGFIXES:
 
 + fixed an error in show method for UnivarLebDecDistribution: 
@@ -50,6 +53,7 @@
   .deleteItemsMCL; 
 + fixed request by B.Ripley as to installed.packages in branch 2.4
 + fixed gaps issue with .multm
++ fixed issue with gaps (in case length(gaps)==0)
   
   and: BDR has changed calls to .C in 2.16.0 to calls to .Call; we used this in qqbounds, 
   respectively in .q2kolmogorov; now have branching functions .pk2 and .pks2 between ante 2.16. and from 2.16 on

Modified: pkg/distr/man/0distr-package.Rd
===================================================================
--- pkg/distr/man/0distr-package.Rd	2013-02-04 22:43:28 UTC (rev 874)
+++ pkg/distr/man/0distr-package.Rd	2013-02-05 00:01:14 UTC (rev 875)
@@ -44,7 +44,7 @@
 \tabular{ll}{
 Package: \tab distr \cr
 Version: \tab 2.4 \cr
-Date: \tab 2013-01-30 \cr
+Date: \tab 2013-02-05 \cr
 Depends: \tab R(>= 2.2.0), methods, graphics, startupmsg, sfsmisc,
 SweaveListingUtils\cr
 LazyLoad: \tab yes \cr

Modified: pkg/distrDoc/DESCRIPTION
===================================================================
--- pkg/distrDoc/DESCRIPTION	2013-02-04 22:43:28 UTC (rev 874)
+++ pkg/distrDoc/DESCRIPTION	2013-02-05 00:01:14 UTC (rev 875)
@@ -1,6 +1,6 @@
 Package: distrDoc
 Version: 2.4
-Date: 2013-01-30
+Date: 2013-02-05
 Title: Documentation for packages distr, distrEx, distrSim, distrTEst, distrTeach, distrMod,
         and distrEllipse
 Description: provides documentation in form of a common vignette to packages distr, distrEx,

Modified: pkg/distrDoc/inst/NEWS
===================================================================
--- pkg/distrDoc/inst/NEWS	2013-02-04 22:43:28 UTC (rev 874)
+++ pkg/distrDoc/inst/NEWS	2013-02-05 00:01:14 UTC (rev 875)
@@ -29,6 +29,7 @@
 + shrinking inst/doc in order to prevent  B. Ripley from archiving distrDoc
 + tried to get the imports in NAMESPACE files in the right order
 + For some strange reason, examle CIex in vignette threw an error; have changed seed; now it works again.
++ deleted no longer needed chm folders
 
 BUGFIXES:
 

Modified: pkg/distrDoc/man/0distrDoc-package.Rd
===================================================================
--- pkg/distrDoc/man/0distrDoc-package.Rd	2013-02-04 22:43:28 UTC (rev 874)
+++ pkg/distrDoc/man/0distrDoc-package.Rd	2013-02-05 00:01:14 UTC (rev 875)
@@ -15,7 +15,7 @@
 \tabular{ll}{
 Package: \tab distrDoc \cr
 Version: \tab 2.4 \cr
-Date: \tab 2013-01-30 \cr
+Date: \tab 2013-02-05 \cr
 Depends: \tab R(>= 2.6.0), tools, distr(>= 2.2.0), startupmsg, distrEx(>= 2.2.0), distrSim(>= 2.2.0), distrTEst(>= 2.2.0), distrTeach(>=
 2.2.0), RandVar(>= 0.7), distrMod(>= 2.2.0), MASS, methods \cr
 LazyLoad: \tab yes \cr

Modified: pkg/distrEx/DESCRIPTION
===================================================================
--- pkg/distrEx/DESCRIPTION	2013-02-04 22:43:28 UTC (rev 874)
+++ pkg/distrEx/DESCRIPTION	2013-02-05 00:01:14 UTC (rev 875)
@@ -1,6 +1,6 @@
 Package: distrEx
 Version: 2.4
-Date: 2013-01-30
+Date: 2013-02-05
 Title: Extensions of package distr
 Description: Extensions of package distr and some additional functionality
 Depends: R(>= 2.6.0), methods, distr(>= 2.2), startupmsg

Modified: pkg/distrEx/inst/NEWS
===================================================================
--- pkg/distrEx/inst/NEWS	2013-02-04 22:43:28 UTC (rev 874)
+++ pkg/distrEx/inst/NEWS	2013-02-05 00:01:14 UTC (rev 875)
@@ -20,6 +20,7 @@
 + added DESCRIPTION tag "ByteCompile" to all our packages
 + updating maintainer email address and URL.
 + added argument no.readonly = TRUE to assignments of form opar <- par()
++ deleted no longer needed chm folders
 
 
 

Modified: pkg/distrEx/man/0distrEx-package.Rd
===================================================================
--- pkg/distrEx/man/0distrEx-package.Rd	2013-02-04 22:43:28 UTC (rev 874)
+++ pkg/distrEx/man/0distrEx-package.Rd	2013-02-05 00:01:14 UTC (rev 875)
@@ -28,7 +28,7 @@
 \tabular{ll}{
 Package: \tab distrEx \cr
 Version: \tab 2.4 \cr
-Date: \tab 2013-01-30 \cr
+Date: \tab 2013-02-05 \cr
 Depends: \tab R(>= 2.6.0), methods, distr(>= 2.2), startupmsg \cr
 LazyLoad: \tab yes \cr
 License: \tab LGPL-3 \cr

Modified: pkg/distrMod/DESCRIPTION
===================================================================
--- pkg/distrMod/DESCRIPTION	2013-02-04 22:43:28 UTC (rev 874)
+++ pkg/distrMod/DESCRIPTION	2013-02-05 00:01:14 UTC (rev 875)
@@ -1,6 +1,6 @@
 Package: distrMod
 Version: 2.4
-Date: 2013-01-30
+Date: 2013-02-05
 Title: Object oriented implementation of probability models
 Description: Object oriented implementation of probability models based on packages 'distr' and
         'distrEx'

Modified: pkg/distrMod/inst/NEWS
===================================================================
--- pkg/distrMod/inst/NEWS	2013-02-04 22:43:28 UTC (rev 874)
+++ pkg/distrMod/inst/NEWS	2013-02-05 00:01:14 UTC (rev 875)
@@ -13,6 +13,8 @@
 
 user-visible CHANGES:
 + moved GumbelLocationFamily to new package "RobExtremes"
++ new function addAlphTrsp2col to add alpha transparency to a 
+  given color; qqplot gains argument alpha.trsp to control for alpha transparency
 
 under the hood:
 + added modifyModel method for ParamFamily, some minor corrections due to more strict checking in R devel
@@ -32,13 +34,22 @@
 + removed relics of ancient L2Fam-slot withPos (was introduced in a try)
 + introduced slot scaleshapename for L2ScaleShapeUnion and methods scalename und scaleshapename (accessor/replacers)
 + after change of @<- semantics by J. Chambers moved from  class(M) <- class(model)  to slotwise copying
++ S4Method "mceCalc", signature(x = "numeric", PFam = "ParamFamily") gains additional 
+  calls to makeOKPar() to warrant admissible parameter values
++ Estimator can now deal with asymptotic variances if given; to this end 
+  gains optional argument ParamFamily 
++ put some examples in \dontrun to reduce check time on CRAN
++ deleted file GumbelLocationFamily.Rd (no longer needed)
++ Default name of Estimator is now "Estimator"
++ deleted no longer needed chm folders
 
-
 BUGFIXES:
 
 + bugfixes in NbinomMeanSizeFamily 
                  and NbinomwithSizeFamily (detected by Matthias!)
-+ digamma instead of trigamma
++ digamma was used instead of trigamma
[TRUNCATED]

To get the complete diff run:
    svnlook diff /svnroot/distr -r 875


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