[Distr-commits] r290 - branches/distr-2.1/pkg/distr branches/distr-2.1/pkg/distr/R branches/distr-2.1/pkg/distr/man branches/distr-2.1/pkg/distrDoc branches/distr-2.1/pkg/distrEx branches/distr-2.1/pkg/distrMod branches/distr-2.1/pkg/distrSim branches/distr-2.1/pkg/distrTEst branches/distr-2.1/pkg/distrTeach pkg/distr/R pkg/distr/chm pkg/distr/man pkg/startupmsg/chm

noreply at r-forge.r-project.org noreply at r-forge.r-project.org
Mon Oct 6 17:41:26 CEST 2008


Author: ruckdeschel
Date: 2008-10-06 17:41:26 +0200 (Mon, 06 Oct 2008)
New Revision: 290

Modified:
   branches/distr-2.1/pkg/distr/DESCRIPTION
   branches/distr-2.1/pkg/distr/R/plot-methods.R
   branches/distr-2.1/pkg/distr/R/plot-methods_LebDec.R
   branches/distr-2.1/pkg/distr/man/plot-methods.Rd
   branches/distr-2.1/pkg/distrDoc/DESCRIPTION
   branches/distr-2.1/pkg/distrEx/DESCRIPTION
   branches/distr-2.1/pkg/distrMod/DESCRIPTION
   branches/distr-2.1/pkg/distrSim/DESCRIPTION
   branches/distr-2.1/pkg/distrTEst/DESCRIPTION
   branches/distr-2.1/pkg/distrTeach/DESCRIPTION
   pkg/distr/R/plot-methods.R
   pkg/distr/R/plot-methods_LebDec.R
   pkg/distr/chm/00Index.html
   pkg/distr/chm/Distr.chm
   pkg/distr/chm/Distr.toc
   pkg/distr/chm/plot-methods.html
   pkg/distr/man/plot-methods.Rd
   pkg/startupmsg/chm/00Index.html
   pkg/startupmsg/chm/startupmsg.chm
Log:
+ updated new version 2.1 in DESCRIPTION files in branches/distr-2.1
+ plot (for distribution objects) now is conformal 
  to the (automatic) generic, i.e. it dispatches on signature (x,y)
  and has methods for signature(x=<distributionclass>,y="missing")
  this kills some "binding" notes...

Modified: branches/distr-2.1/pkg/distr/DESCRIPTION
===================================================================
--- branches/distr-2.1/pkg/distr/DESCRIPTION	2008-10-06 12:19:28 UTC (rev 289)
+++ branches/distr-2.1/pkg/distr/DESCRIPTION	2008-10-06 15:41:26 UTC (rev 290)
@@ -1,6 +1,6 @@
 Package: distr
-Version: 2.0
-Date: 2008-05-30
+Version: 2.1
+Date: 2008-10-06
 Title: Object orientated implementation of distributions
 Description: Object orientated implementation of distributions
 Author: Florian Camphausen, Matthias Kohl, Peter Ruckdeschel, Thomas Stabla

Modified: branches/distr-2.1/pkg/distr/R/plot-methods.R
===================================================================
--- branches/distr-2.1/pkg/distr/R/plot-methods.R	2008-10-06 12:19:28 UTC (rev 289)
+++ branches/distr-2.1/pkg/distr/R/plot-methods.R	2008-10-06 15:41:26 UTC (rev 290)
@@ -1,7 +1,7 @@
 # -------- AbscontDistribution ---------- #
 
-setMethod("plot", "AbscontDistribution",
-   function(x, y = NULL, width = 10, height = 5.5, withSweave = getdistrOption("withSweave"),
+setMethod("plot", signature(x = "AbscontDistribution", y = "missing"),
+   function(x, width = 10, height = 5.5, withSweave = getdistrOption("withSweave"),
             xlim = NULL, ylim = NULL, ngrid = 1000, verticals = TRUE,
             do.points = TRUE, main = FALSE, inner = TRUE, sub = FALSE, 
             bmar = par("mar")[1], tmar = par("mar")[3], ..., 
@@ -257,8 +257,8 @@
    )
 # -------- DiscreteDistribution -------- #
 
-setMethod("plot", "DiscreteDistribution",
-    function(x, y = NULL, width = 10, height = 5.5, withSweave = getdistrOption("withSweave"), 
+setMethod("plot", signature(x = "DiscreteDistribution", y = "missing"),
+    function(x,  width = 10, height = 5.5, withSweave = getdistrOption("withSweave"), 
              xlim = NULL, ylim = NULL, verticals = TRUE, do.points = TRUE, 
              main = FALSE, inner = TRUE, sub = FALSE,
              bmar = par("mar")[1], tmar = par("mar")[3], ..., 
@@ -529,8 +529,8 @@
 
 # -------- DistributionList   ---------- #
 
-setMethod("plot", "DistrList", 
-    function(x, y = NULL, ...){ 
+setMethod("plot", signature(x =  "DistrList", y = "missing"),
+    function(x,  ...){ 
         for(i in 1:length(x)){
             devNew()
             plot(x[[i]],...)

Modified: branches/distr-2.1/pkg/distr/R/plot-methods_LebDec.R
===================================================================
--- branches/distr-2.1/pkg/distr/R/plot-methods_LebDec.R	2008-10-06 12:19:28 UTC (rev 289)
+++ branches/distr-2.1/pkg/distr/R/plot-methods_LebDec.R	2008-10-06 15:41:26 UTC (rev 290)
@@ -1,7 +1,7 @@
 ############################ plot #######################
 
-setMethod("plot", "AffLinUnivarLebDecDistribution",
-    function(x, y = NULL, width = 10, height = 5.5, withSweave = getdistrOption("withSweave"),
+setMethod("plot", signature(x = "AffLinUnivarLebDecDistribution", y = "missing"),
+    function(x, width = 10, height = 5.5, withSweave = getdistrOption("withSweave"),
              xlim = NULL, ylim = NULL, ngrid = 1000,
              verticals = TRUE, do.points = TRUE,
              main = FALSE, inner = TRUE, sub = FALSE,
@@ -17,12 +17,13 @@
       mc$x <- NULL
       x <- as(x,"UnivarLebDecDistribution")
       mc <- c(list(x=x), mc)
-      do.call(getMethod("plot","UnivarLebDecDistribution"), mc)
+      do.call(getMethod("plot",
+              signature(x="UnivarLebDecDistribution",y="missing")), mc)
       return(invisible())
 })
 
-setMethod("plot", "UnivarLebDecDistribution",
-    function(x, y = NULL, width = 10, height = 14.5, withSweave = getdistrOption("withSweave"),
+setMethod("plot", signature(x = "UnivarLebDecDistribution", y = "missing"),
+    function(x, width = 10, height = 14.5, withSweave = getdistrOption("withSweave"),
              xlim = NULL, ylim = NULL, ngrid = 1000,
              verticals = TRUE, do.points = TRUE,
              main = FALSE, inner = TRUE, sub = FALSE,
@@ -45,7 +46,8 @@
          mc$x <- NULL
          x <- x at mixDistr[[2]]
          mc <- c(list(x=x), mc)
-         do.call(getMethod("plot","DiscreteDistribution"), mc)
+         do.call(getMethod("plot",signature(x = "DiscreteDistribution",
+                                            y = "missing")), mc)
          return(invisible())
         }
 
@@ -53,7 +55,8 @@
          mc$x <- NULL
          x <- x at mixDistr[[1]]
          mc <- c(list(x=x), mc)
-         do.call(getMethod("plot","AbscontDistribution"), mc)
+         do.call(getMethod("plot",signature(x = "AbscontDistribution",
+                                            y = "missing")), mc)
          return(invisible())
         }
 

Modified: branches/distr-2.1/pkg/distr/man/plot-methods.Rd
===================================================================
--- branches/distr-2.1/pkg/distr/man/plot-methods.Rd	2008-10-06 12:19:28 UTC (rev 289)
+++ branches/distr-2.1/pkg/distr/man/plot-methods.Rd	2008-10-06 15:41:26 UTC (rev 290)
@@ -2,15 +2,15 @@
 \docType{methods}
 \alias{plot}
 \alias{plot-methods}
-\alias{plot,AffLinUnivarLebDecDistribution-method}
-\alias{plot,UnivarLebDecDistribution-method}
-\alias{plot,AbscontDistribution-method}
-\alias{plot,DiscreteDistribution-method}
-\alias{plot,DistrList-method}
+\alias{plot,AffLinUnivarLebDecDistribution,missing-method}
+\alias{plot,UnivarLebDecDistribution,missing-method}
+\alias{plot,AbscontDistribution,missing-method}
+\alias{plot,DiscreteDistribution,missing-method}
+\alias{plot,DistrList,missing-method}
 \title{ Methods for Function plot in Package `distr' }
 \description{plot-methods}
 \usage{plot(x,y, ...)
-\S4method{plot}{AbscontDistribution}(x, y = NULL, width = 10, height = 5.5,
+\S4method{plot}{AbscontDistribution,missing}(x, width = 10, height = 5.5,
      withSweave = getdistrOption("withSweave"), xlim = NULL, ylim = NULL, ngrid = 1000,
      verticals = TRUE, do.points = TRUE, main = FALSE, inner = TRUE,
      sub = FALSE, bmar = par("mar")[1], tmar = par("mar")[3], ...,
@@ -18,7 +18,7 @@
      col.points = par("col"), col.vert = par("col"), col.main = par("col.main"),  
      col.inner = par("col.main"), col.sub = par("col.sub"), cex.points = 2.0, 
      pch.u = 21, pch.a = 16, mfColRow = TRUE)
-\S4method{plot}{DiscreteDistribution}(x, y = NULL, width = 10, height = 5.5,
+\S4method{plot}{DiscreteDistribution,missing}(x, width = 10, height = 5.5,
      withSweave = getdistrOption("withSweave"), xlim = NULL, ylim = NULL, verticals = TRUE,
      do.points = TRUE, main = FALSE, inner = TRUE, sub = FALSE, 
      bmar = par("mar")[1], tmar = par("mar")[3], ..., 
@@ -26,7 +26,7 @@
      col.points = par("col"), col.hor = par("col"), col.vert = par("col"), 
      col.main = par("col.main"), col.inner = par("col.main"), 
      col.sub = par("col.sub"),  cex.points = 2.0, pch.u = 21, pch.a = 16, mfColRow = TRUE)
-\S4method{plot}{AffLinUnivarLebDecDistribution}(x, y = NULL, width = 10, 
+\S4method{plot}{AffLinUnivarLebDecDistribution,missing}(x, width = 10, 
      height = 5.5, withSweave = getdistrOption("withSweave"), xlim = NULL, ylim = NULL, ngrid = 1000,
      verticals = TRUE, do.points = TRUE, main = FALSE, inner = TRUE, sub = FALSE,
      bmar = par("mar")[1], tmar = par("mar")[3], ..., cex.main = par("cex.main"), 
@@ -34,7 +34,7 @@
      col.hor = par("col"), col.vert = par("col"), col.main = par("col.main"), 
      col.inner = par("col.main"), col.sub = par("col.sub"),  cex.points = 2.0,
      pch.u = 21, pch.a = 16, mfColRow = TRUE)
-\S4method{plot}{UnivarLebDecDistribution}(x, y = NULL, width = 10, 
+\S4method{plot}{UnivarLebDecDistribution,missing}(x, width = 10, 
      height = 14.5, withSweave = getdistrOption("withSweave"), xlim = NULL, ylim = NULL, ngrid = 1000,
      verticals = TRUE, do.points = TRUE, main = FALSE, inner = TRUE, sub = FALSE,
      bmar = par("mar")[1], tmar = par("mar")[3], ..., cex.main = par("cex.main"), 
@@ -42,7 +42,7 @@
      col.hor = par("col"), col.vert = par("col"), col.main = par("col.main"), 
      col.inner = par("col.main"), col.sub = par("col.sub"),  cex.points = 2.0,
      pch.u = 21, pch.a = 16, mfColRow = TRUE)
-\S4method{plot}{DistrList}(x, y = NULL, ...)
+\S4method{plot}{DistrList,missing}(x, ...)
 }
 \arguments{
   \item{x}{object of class 
@@ -109,16 +109,16 @@
 }
 \details{
 \describe{
-\item{plot}{\code{signature(object = "AffLinUnivarLebDecDistribution")}: plots  
+\item{plot}{\code{signature(x = "AffLinUnivarLebDecDistribution", y = "missing")}: plots  
    cumulative distribution function and the quantile function }
-\item{plot}{\code{signature(object = "UnivarLebDecDistribution")}: plots a set of
+\item{plot}{\code{signature(x = "UnivarLebDecDistribution", y = "missing")}: plots a set of
   eight plots: in the first row,  it plots the 
    cumulative distribution function and the quantile function; in the second
    row the absolutely continuous part (with density, cdf and quantile fct.),
    and in the last row the discrete part (with prob.fct., cdf and quantile fct.). }
-\item{plot}{\code{signature(object = "AbscontDistribution")}: plots density, 
+\item{plot}{\code{signature(x = "AbscontDistribution", y = "missing")}: plots density, 
    cumulative distribution function and the quantile function }
-\item{plot}{\code{signature(object = "DiscreteDistribution")}: plots probability 
+\item{plot}{\code{signature(x = "DiscreteDistribution", y = "missing")}: plots probability 
 function, cumulative distribution function and the quantile function}
 }
 Any parameters of \code{plot.default} may be passed on to this particular

Modified: branches/distr-2.1/pkg/distrDoc/DESCRIPTION
===================================================================
--- branches/distr-2.1/pkg/distrDoc/DESCRIPTION	2008-10-06 12:19:28 UTC (rev 289)
+++ branches/distr-2.1/pkg/distrDoc/DESCRIPTION	2008-10-06 15:41:26 UTC (rev 290)
@@ -1,6 +1,6 @@
 Package: distrDoc
-Version: 2.0
-Date: 2008-07-28
+Version: 2.1
+Date: 2008-10-06
 Title: Documentation for packages distr, distrEx, distrSim, distrTEst
 Description: provides documentation in form of a common vignette to packages distr, distrEx, distrMod, distrSim, distrTEst
 Author: Florian Camphausen, Matthias Kohl, Peter Ruckdeschel, Thomas Stabla

Modified: branches/distr-2.1/pkg/distrEx/DESCRIPTION
===================================================================
--- branches/distr-2.1/pkg/distrEx/DESCRIPTION	2008-10-06 12:19:28 UTC (rev 289)
+++ branches/distr-2.1/pkg/distrEx/DESCRIPTION	2008-10-06 15:41:26 UTC (rev 290)
@@ -1,6 +1,6 @@
 Package: distrEx
-Version: 2.0
-Date: 2008-05-30
+Version: 2.1
+Date: 2008-10-06
 Title: Extensions of package distr
 Description: Extensions of package distr and some additional functionality
 Depends: R(>= 2.6.0), methods, distr(>= 2.0), evd, startupmsg

Modified: branches/distr-2.1/pkg/distrMod/DESCRIPTION
===================================================================
--- branches/distr-2.1/pkg/distrMod/DESCRIPTION	2008-10-06 12:19:28 UTC (rev 289)
+++ branches/distr-2.1/pkg/distrMod/DESCRIPTION	2008-10-06 15:41:26 UTC (rev 290)
@@ -1,6 +1,6 @@
 Package: distrMod
-Version: 2.0
-Date: 2008-08-26
+Version: 2.1
+Date: 2008-10-06
 Title: Object orientated implementation of probability models
 Description: Object orientated implementation of probability models based on packages 'distr' and 'distrEx'
 Author: Matthias Kohl, Peter Ruckdeschel

Modified: branches/distr-2.1/pkg/distrSim/DESCRIPTION
===================================================================
--- branches/distr-2.1/pkg/distrSim/DESCRIPTION	2008-10-06 12:19:28 UTC (rev 289)
+++ branches/distr-2.1/pkg/distrSim/DESCRIPTION	2008-10-06 15:41:26 UTC (rev 290)
@@ -1,6 +1,6 @@
 Package: distrSim
-Version: 2.0
-Date: 2008-06-03
+Version: 2.1
+Date: 2008-10-06
 Title: Simulation classes based on package distr
 Depends: R(>= 2.6.0), methods, graphics, setRNG(>= 2006.2-1), distr(>= 2.0), startupmsg
 Suggests: distrEx(>= 2.0)

Modified: branches/distr-2.1/pkg/distrTEst/DESCRIPTION
===================================================================
--- branches/distr-2.1/pkg/distrTEst/DESCRIPTION	2008-10-06 12:19:28 UTC (rev 289)
+++ branches/distr-2.1/pkg/distrTEst/DESCRIPTION	2008-10-06 15:41:26 UTC (rev 290)
@@ -1,6 +1,6 @@
 Package: distrTEst
-Version: 2.0
-Date: 2008-05-30
+Version: 2.1
+Date: 2008-10-06
 Title: Estimation and Testing classes based on package distr
 Depends: R(>= 2.6.0), methods, graphics, setRNG(>= 2006.2-1), distr(>= 2.0), distrSim(>= 2.0), startupmsg
 Suggests: distrEx(>= 2.0)

Modified: branches/distr-2.1/pkg/distrTeach/DESCRIPTION
===================================================================
--- branches/distr-2.1/pkg/distrTeach/DESCRIPTION	2008-10-06 12:19:28 UTC (rev 289)
+++ branches/distr-2.1/pkg/distrTeach/DESCRIPTION	2008-10-06 15:41:26 UTC (rev 290)
@@ -1,6 +1,6 @@
 Package: distrTeach
-Version: 2.0
-Date: 2008-05-08
+Version: 2.1
+Date: 2008-10-06
 Title: Extensions of package distr for teaching Stochastics/Statistics in secondary school
 Description: Extensions of package distr and some additional functionality
 Depends: R(>= 2.2.0), methods, distr(>= 2.0), distrEx(>= 2.0), startupmsg

Modified: pkg/distr/R/plot-methods.R
===================================================================
--- pkg/distr/R/plot-methods.R	2008-10-06 12:19:28 UTC (rev 289)
+++ pkg/distr/R/plot-methods.R	2008-10-06 15:41:26 UTC (rev 290)
@@ -1,7 +1,7 @@
 # -------- AbscontDistribution ---------- #
 
-setMethod("plot", "AbscontDistribution",
-   function(x, y = NULL, width = 10, height = 5.5, withSweave = getdistrOption("withSweave"),
+setMethod("plot", signature(x = "AbscontDistribution", y = "missing"),
+   function(x, width = 10, height = 5.5, withSweave = getdistrOption("withSweave"),
             xlim = NULL, ylim = NULL, ngrid = 1000, verticals = TRUE,
             do.points = TRUE, main = FALSE, inner = TRUE, sub = FALSE, 
             bmar = par("mar")[1], tmar = par("mar")[3], ..., 
@@ -257,8 +257,8 @@
    )
 # -------- DiscreteDistribution -------- #
 
-setMethod("plot", "DiscreteDistribution",
-    function(x, y = NULL, width = 10, height = 5.5, withSweave = getdistrOption("withSweave"), 
+setMethod("plot", signature(x = "DiscreteDistribution", y = "missing"),
+    function(x,  width = 10, height = 5.5, withSweave = getdistrOption("withSweave"), 
              xlim = NULL, ylim = NULL, verticals = TRUE, do.points = TRUE, 
              main = FALSE, inner = TRUE, sub = FALSE,
              bmar = par("mar")[1], tmar = par("mar")[3], ..., 
@@ -529,8 +529,8 @@
 
 # -------- DistributionList   ---------- #
 
-setMethod("plot", "DistrList", 
-    function(x, y = NULL, ...){ 
+setMethod("plot", signature(x =  "DistrList", y = "missing"),
+    function(x,  ...){ 
         for(i in 1:length(x)){
             devNew()
             plot(x[[i]],...)

Modified: pkg/distr/R/plot-methods_LebDec.R
===================================================================
--- pkg/distr/R/plot-methods_LebDec.R	2008-10-06 12:19:28 UTC (rev 289)
+++ pkg/distr/R/plot-methods_LebDec.R	2008-10-06 15:41:26 UTC (rev 290)
@@ -1,7 +1,7 @@
 ############################ plot #######################
 
-setMethod("plot", "AffLinUnivarLebDecDistribution",
-    function(x, y = NULL, width = 10, height = 5.5, withSweave = getdistrOption("withSweave"),
+setMethod("plot", signature(x = "AffLinUnivarLebDecDistribution", y = "missing"),
+    function(x, width = 10, height = 5.5, withSweave = getdistrOption("withSweave"),
              xlim = NULL, ylim = NULL, ngrid = 1000,
              verticals = TRUE, do.points = TRUE,
              main = FALSE, inner = TRUE, sub = FALSE,
@@ -17,12 +17,13 @@
       mc$x <- NULL
       x <- as(x,"UnivarLebDecDistribution")
       mc <- c(list(x=x), mc)
-      do.call(getMethod("plot","UnivarLebDecDistribution"), mc)
+      do.call(getMethod("plot",
+              signature(x="UnivarLebDecDistribution",y="missing")), mc)
       return(invisible())
 })
 
-setMethod("plot", "UnivarLebDecDistribution",
-    function(x, y = NULL, width = 10, height = 14.5, withSweave = getdistrOption("withSweave"),
+setMethod("plot", signature(x = "UnivarLebDecDistribution", y = "missing"),
+    function(x, width = 10, height = 14.5, withSweave = getdistrOption("withSweave"),
              xlim = NULL, ylim = NULL, ngrid = 1000,
              verticals = TRUE, do.points = TRUE,
              main = FALSE, inner = TRUE, sub = FALSE,
@@ -45,7 +46,8 @@
          mc$x <- NULL
          x <- x at mixDistr[[2]]
          mc <- c(list(x=x), mc)
-         do.call(getMethod("plot","DiscreteDistribution"), mc)
+         do.call(getMethod("plot",signature(x = "DiscreteDistribution",
+                                            y = "missing")), mc)
          return(invisible())
         }
 
@@ -53,7 +55,8 @@
          mc$x <- NULL
          x <- x at mixDistr[[1]]
          mc <- c(list(x=x), mc)
-         do.call(getMethod("plot","AbscontDistribution"), mc)
+         do.call(getMethod("plot",signature(x = "AbscontDistribution",
+                                            y = "missing")), mc)
          return(invisible())
         }
 

Modified: pkg/distr/chm/00Index.html
===================================================================
--- pkg/distr/chm/00Index.html	2008-10-06 12:19:28 UTC (rev 289)
+++ pkg/distr/chm/00Index.html	2008-10-06 15:41:26 UTC (rev 290)
@@ -1144,15 +1144,15 @@
 <td>Methods for Function pivot in Package &lsquo;distr&rsquo; </td></tr>
 <tr><td width="25%"><a href="plot-methods.html">plot</a></td>
 <td>Methods for Function plot in Package &lsquo;distr&rsquo; </td></tr>
-<tr><td width="25%"><a href="plot-methods.html">plot,AbscontDistribution-method</a></td>
+<tr><td width="25%"><a href="plot-methods.html">plot,AbscontDistribution,missing-method</a></td>
 <td>Methods for Function plot in Package &lsquo;distr&rsquo; </td></tr>
-<tr><td width="25%"><a href="plot-methods.html">plot,AffLinUnivarLebDecDistribution-method</a></td>
+<tr><td width="25%"><a href="plot-methods.html">plot,AffLinUnivarLebDecDistribution,missing-method</a></td>
 <td>Methods for Function plot in Package &lsquo;distr&rsquo; </td></tr>
-<tr><td width="25%"><a href="plot-methods.html">plot,DiscreteDistribution-method</a></td>
+<tr><td width="25%"><a href="plot-methods.html">plot,DiscreteDistribution,missing-method</a></td>
 <td>Methods for Function plot in Package &lsquo;distr&rsquo; </td></tr>
-<tr><td width="25%"><a href="plot-methods.html">plot,DistrList-method</a></td>
+<tr><td width="25%"><a href="plot-methods.html">plot,DistrList,missing-method</a></td>
 <td>Methods for Function plot in Package &lsquo;distr&rsquo; </td></tr>
-<tr><td width="25%"><a href="plot-methods.html">plot,UnivarLebDecDistribution-method</a></td>
+<tr><td width="25%"><a href="plot-methods.html">plot,UnivarLebDecDistribution,missing-method</a></td>
 <td>Methods for Function plot in Package &lsquo;distr&rsquo; </td></tr>
 <tr><td width="25%"><a href="plot-methods.html">plot-methods</a></td>
 <td>Methods for Function plot in Package &lsquo;distr&rsquo; </td></tr>

Modified: pkg/distr/chm/Distr.chm
===================================================================
(Binary files differ)

Modified: pkg/distr/chm/Distr.toc
===================================================================
--- pkg/distr/chm/Distr.toc	2008-10-06 12:19:28 UTC (rev 289)
+++ pkg/distr/chm/Distr.toc	2008-10-06 15:41:26 UTC (rev 290)
@@ -2354,23 +2354,23 @@
 <param name="Local" value="plot-methods.html">
 </OBJECT>
 <LI> <OBJECT type="text/sitemap">
-<param name="Name" value="plot,AbscontDistribution-method">
+<param name="Name" value="plot,AbscontDistribution,missing-method">
 <param name="Local" value="plot-methods.html">
 </OBJECT>
 <LI> <OBJECT type="text/sitemap">
-<param name="Name" value="plot,AffLinUnivarLebDecDistribution-method">
+<param name="Name" value="plot,AffLinUnivarLebDecDistribution,missing-method">
 <param name="Local" value="plot-methods.html">
 </OBJECT>
 <LI> <OBJECT type="text/sitemap">
-<param name="Name" value="plot,DiscreteDistribution-method">
+<param name="Name" value="plot,DiscreteDistribution,missing-method">
 <param name="Local" value="plot-methods.html">
 </OBJECT>
 <LI> <OBJECT type="text/sitemap">
-<param name="Name" value="plot,DistrList-method">
+<param name="Name" value="plot,DistrList,missing-method">
 <param name="Local" value="plot-methods.html">
 </OBJECT>
 <LI> <OBJECT type="text/sitemap">
-<param name="Name" value="plot,UnivarLebDecDistribution-method">
+<param name="Name" value="plot,UnivarLebDecDistribution,missing-method">
 <param name="Local" value="plot-methods.html">
 </OBJECT>
 <LI> <OBJECT type="text/sitemap">

Modified: pkg/distr/chm/plot-methods.html
===================================================================
--- pkg/distr/chm/plot-methods.html	2008-10-06 12:19:28 UTC (rev 289)
+++ pkg/distr/chm/plot-methods.html	2008-10-06 15:41:26 UTC (rev 290)
@@ -7,11 +7,11 @@
 <table width="100%"><tr><td>plot-methods(distr)</td><td align="right">R Documentation</td></tr></table><object type="application/x-oleobject" classid="clsid:1e2a7bd0-dab9-11d0-b93a-00c04fc99f9e">
 <param name="keyword" value="R:   plot">
 <param name="keyword" value="R:   plot-methods">
-<param name="keyword" value="R:   plot,AffLinUnivarLebDecDistribution-method">
-<param name="keyword" value="R:   plot,UnivarLebDecDistribution-method">
-<param name="keyword" value="R:   plot,AbscontDistribution-method">
-<param name="keyword" value="R:   plot,DiscreteDistribution-method">
-<param name="keyword" value="R:   plot,DistrList-method">
+<param name="keyword" value="R:   plot,AffLinUnivarLebDecDistribution,missing-method">
+<param name="keyword" value="R:   plot,UnivarLebDecDistribution,missing-method">
+<param name="keyword" value="R:   plot,AbscontDistribution,missing-method">
+<param name="keyword" value="R:   plot,DiscreteDistribution,missing-method">
+<param name="keyword" value="R:   plot,DistrList,missing-method">
 <param name="keyword" value=" Methods for Function plot in Package &lsquo;distr&rsquo;">
 </object>
 
@@ -29,8 +29,8 @@
 <h3>Usage</h3>
 
 <pre>plot(x,y, ...)
-## S4 method for signature 'AbscontDistribution':
-plot(x, y = NULL, width = 10, height = 5.5,
+## S4 method for signature 'AbscontDistribution, missing':
+plot(x, width = 10, height = 5.5,
      withSweave = getdistrOption("withSweave"), xlim = NULL, ylim = NULL, ngrid = 1000,
      verticals = TRUE, do.points = TRUE, main = FALSE, inner = TRUE,
      sub = FALSE, bmar = par("mar")[1], tmar = par("mar")[3], ...,
@@ -38,8 +38,8 @@
      col.points = par("col"), col.vert = par("col"), col.main = par("col.main"),  
      col.inner = par("col.main"), col.sub = par("col.sub"), cex.points = 2.0, 
      pch.u = 21, pch.a = 16, mfColRow = TRUE)
-## S4 method for signature 'DiscreteDistribution':
-plot(x, y = NULL, width = 10, height = 5.5,
+## S4 method for signature 'DiscreteDistribution, missing':
+plot(x, width = 10, height = 5.5,
      withSweave = getdistrOption("withSweave"), xlim = NULL, ylim = NULL, verticals = TRUE,
      do.points = TRUE, main = FALSE, inner = TRUE, sub = FALSE, 
      bmar = par("mar")[1], tmar = par("mar")[3], ..., 
@@ -47,9 +47,9 @@
      col.points = par("col"), col.hor = par("col"), col.vert = par("col"), 
      col.main = par("col.main"), col.inner = par("col.main"), 
      col.sub = par("col.sub"),  cex.points = 2.0, pch.u = 21, pch.a = 16, mfColRow = TRUE)
-## S4 method for signature
-##   'AffLinUnivarLebDecDistribution':
-plot(x, y = NULL, width = 10, 
+## S4 method for signature 'AffLinUnivarLebDecDistribution,
+##   missing':
+plot(x, width = 10, 
      height = 5.5, withSweave = getdistrOption("withSweave"), xlim = NULL, ylim = NULL, ngrid = 1000,
      verticals = TRUE, do.points = TRUE, main = FALSE, inner = TRUE, sub = FALSE,
      bmar = par("mar")[1], tmar = par("mar")[3], ..., cex.main = par("cex.main"), 
@@ -57,8 +57,9 @@
      col.hor = par("col"), col.vert = par("col"), col.main = par("col.main"), 
      col.inner = par("col.main"), col.sub = par("col.sub"),  cex.points = 2.0,
      pch.u = 21, pch.a = 16, mfColRow = TRUE)
-## S4 method for signature 'UnivarLebDecDistribution':
-plot(x, y = NULL, width = 10, 
+## S4 method for signature 'UnivarLebDecDistribution,
+##   missing':
+plot(x, width = 10, 
      height = 14.5, withSweave = getdistrOption("withSweave"), xlim = NULL, ylim = NULL, ngrid = 1000,
      verticals = TRUE, do.points = TRUE, main = FALSE, inner = TRUE, sub = FALSE,
      bmar = par("mar")[1], tmar = par("mar")[3], ..., cex.main = par("cex.main"), 
@@ -66,8 +67,8 @@
      col.hor = par("col"), col.vert = par("col"), col.main = par("col.main"), 
      col.inner = par("col.main"), col.sub = par("col.sub"),  cex.points = 2.0,
      pch.u = 21, pch.a = 16, mfColRow = TRUE)
-## S4 method for signature 'DistrList':
-plot(x, y = NULL, ...)
+## S4 method for signature 'DistrList, missing':
+plot(x, ...)
 </pre>
 
 
@@ -198,16 +199,16 @@
 <h3>Details</h3>
 
 <dl>
-<dt>plot</dt><dd><code>signature(object = "AffLinUnivarLebDecDistribution")</code>: plots  
+<dt>plot</dt><dd><code>signature(x = "AffLinUnivarLebDecDistribution", y = "missing")</code>: plots  
 cumulative distribution function and the quantile function </dd>
-<dt>plot</dt><dd><code>signature(object = "UnivarLebDecDistribution")</code>: plots a set of
+<dt>plot</dt><dd><code>signature(x = "UnivarLebDecDistribution", y = "missing")</code>: plots a set of
 eight plots: in the first row,  it plots the 
 cumulative distribution function and the quantile function; in the second
 row the absolutely continuous part (with density, cdf and quantile fct.),
 and in the last row the discrete part (with prob.fct., cdf and quantile fct.). </dd>
-<dt>plot</dt><dd><code>signature(object = "AbscontDistribution")</code>: plots density, 
+<dt>plot</dt><dd><code>signature(x = "AbscontDistribution", y = "missing")</code>: plots density, 
 cumulative distribution function and the quantile function </dd>
-<dt>plot</dt><dd><code>signature(object = "DiscreteDistribution")</code>: plots probability 
+<dt>plot</dt><dd><code>signature(x = "DiscreteDistribution", y = "missing")</code>: plots probability 
 function, cumulative distribution function and the quantile function</dd>
 </dl>
 <p>

Modified: pkg/distr/man/plot-methods.Rd
===================================================================
--- pkg/distr/man/plot-methods.Rd	2008-10-06 12:19:28 UTC (rev 289)
+++ pkg/distr/man/plot-methods.Rd	2008-10-06 15:41:26 UTC (rev 290)
@@ -2,15 +2,15 @@
 \docType{methods}
 \alias{plot}
 \alias{plot-methods}
-\alias{plot,AffLinUnivarLebDecDistribution-method}
-\alias{plot,UnivarLebDecDistribution-method}
-\alias{plot,AbscontDistribution-method}
-\alias{plot,DiscreteDistribution-method}
-\alias{plot,DistrList-method}
+\alias{plot,AffLinUnivarLebDecDistribution,missing-method}
+\alias{plot,UnivarLebDecDistribution,missing-method}
+\alias{plot,AbscontDistribution,missing-method}
+\alias{plot,DiscreteDistribution,missing-method}
+\alias{plot,DistrList,missing-method}
 \title{ Methods for Function plot in Package `distr' }
 \description{plot-methods}
 \usage{plot(x,y, ...)
-\S4method{plot}{AbscontDistribution}(x, y = NULL, width = 10, height = 5.5,
+\S4method{plot}{AbscontDistribution,missing}(x, width = 10, height = 5.5,
      withSweave = getdistrOption("withSweave"), xlim = NULL, ylim = NULL, ngrid = 1000,
      verticals = TRUE, do.points = TRUE, main = FALSE, inner = TRUE,
      sub = FALSE, bmar = par("mar")[1], tmar = par("mar")[3], ...,
@@ -18,7 +18,7 @@
      col.points = par("col"), col.vert = par("col"), col.main = par("col.main"),  
      col.inner = par("col.main"), col.sub = par("col.sub"), cex.points = 2.0, 
      pch.u = 21, pch.a = 16, mfColRow = TRUE)
-\S4method{plot}{DiscreteDistribution}(x, y = NULL, width = 10, height = 5.5,
+\S4method{plot}{DiscreteDistribution,missing}(x, width = 10, height = 5.5,
      withSweave = getdistrOption("withSweave"), xlim = NULL, ylim = NULL, verticals = TRUE,
      do.points = TRUE, main = FALSE, inner = TRUE, sub = FALSE, 
      bmar = par("mar")[1], tmar = par("mar")[3], ..., 
@@ -26,7 +26,7 @@
      col.points = par("col"), col.hor = par("col"), col.vert = par("col"), 
      col.main = par("col.main"), col.inner = par("col.main"), 
      col.sub = par("col.sub"),  cex.points = 2.0, pch.u = 21, pch.a = 16, mfColRow = TRUE)
-\S4method{plot}{AffLinUnivarLebDecDistribution}(x, y = NULL, width = 10, 
+\S4method{plot}{AffLinUnivarLebDecDistribution,missing}(x, width = 10, 
      height = 5.5, withSweave = getdistrOption("withSweave"), xlim = NULL, ylim = NULL, ngrid = 1000,
      verticals = TRUE, do.points = TRUE, main = FALSE, inner = TRUE, sub = FALSE,
      bmar = par("mar")[1], tmar = par("mar")[3], ..., cex.main = par("cex.main"), 
@@ -34,7 +34,7 @@
      col.hor = par("col"), col.vert = par("col"), col.main = par("col.main"), 
      col.inner = par("col.main"), col.sub = par("col.sub"),  cex.points = 2.0,
      pch.u = 21, pch.a = 16, mfColRow = TRUE)
-\S4method{plot}{UnivarLebDecDistribution}(x, y = NULL, width = 10, 
+\S4method{plot}{UnivarLebDecDistribution,missing}(x, width = 10, 
      height = 14.5, withSweave = getdistrOption("withSweave"), xlim = NULL, ylim = NULL, ngrid = 1000,
      verticals = TRUE, do.points = TRUE, main = FALSE, inner = TRUE, sub = FALSE,
      bmar = par("mar")[1], tmar = par("mar")[3], ..., cex.main = par("cex.main"), 
@@ -42,7 +42,7 @@
      col.hor = par("col"), col.vert = par("col"), col.main = par("col.main"), 
      col.inner = par("col.main"), col.sub = par("col.sub"),  cex.points = 2.0,
      pch.u = 21, pch.a = 16, mfColRow = TRUE)
-\S4method{plot}{DistrList}(x, y = NULL, ...)
+\S4method{plot}{DistrList,missing}(x, ...)
 }
 \arguments{
   \item{x}{object of class 
@@ -109,16 +109,16 @@
 }
 \details{
 \describe{
-\item{plot}{\code{signature(object = "AffLinUnivarLebDecDistribution")}: plots  
+\item{plot}{\code{signature(x = "AffLinUnivarLebDecDistribution", y = "missing")}: plots  
    cumulative distribution function and the quantile function }
-\item{plot}{\code{signature(object = "UnivarLebDecDistribution")}: plots a set of
+\item{plot}{\code{signature(x = "UnivarLebDecDistribution", y = "missing")}: plots a set of
   eight plots: in the first row,  it plots the 
    cumulative distribution function and the quantile function; in the second
    row the absolutely continuous part (with density, cdf and quantile fct.),
    and in the last row the discrete part (with prob.fct., cdf and quantile fct.). }
-\item{plot}{\code{signature(object = "AbscontDistribution")}: plots density, 
+\item{plot}{\code{signature(x = "AbscontDistribution", y = "missing")}: plots density, 
    cumulative distribution function and the quantile function }
-\item{plot}{\code{signature(object = "DiscreteDistribution")}: plots probability 
+\item{plot}{\code{signature(x = "DiscreteDistribution", y = "missing")}: plots probability 
 function, cumulative distribution function and the quantile function}
 }
 Any parameters of \code{plot.default} may be passed on to this particular

Modified: pkg/startupmsg/chm/00Index.html
===================================================================
--- pkg/startupmsg/chm/00Index.html	2008-10-06 12:19:28 UTC (rev 289)
+++ pkg/startupmsg/chm/00Index.html	2008-10-06 15:41:26 UTC (rev 290)
@@ -10,7 +10,7 @@
 <param name="keyword" value=".. contents">
 </object>
 
-<h2>Help pages for package &lsquo;startupmsg&rsquo; version 0.5</h2>
+<h2>Help pages for package &lsquo;startupmsg&rsquo; version 0.5.1</h2>
 
 
 <table width="100%">

Modified: pkg/startupmsg/chm/startupmsg.chm
===================================================================
(Binary files differ)



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